RNA–Protein interactions for RNA: ENST00000398405.5

TMPRSS3-203, Transcript of transmembrane serine protease 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TMPRSS3, Length 2,754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS3-203ENST00000398405 NISCHQ9Y2I1 1504 aa25.58■■□□□ 1.69
TMPRSS3-203ENST00000398405 HRCP23327 699 aa23.63■■□□□ 1.37
TMPRSS3-203ENST00000398405 PELP1Q8IZL8 1130 aaKnown RBP23.57■■□□□ 1.36
TMPRSS3-203ENST00000398405 MYT1Q01538 1121 aa23.02■■□□□ 1.28
TMPRSS3-203ENST00000398405 PPARGC1BQ86YN6 1023 aaKnown RBP22.83■■□□□ 1.25
TMPRSS3-203ENST00000398405 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
TMPRSS3-203ENST00000398405 MYO15BQ96JP2 1530 aa22.65■■□□□ 1.22
TMPRSS3-203ENST00000398405 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
TMPRSS3-203ENST00000398405 DCAF1Q9Y4B6 1507 aa22.51■■□□□ 1.19
TMPRSS3-203ENST00000398405 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
TMPRSS3-203ENST00000398405 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
TMPRSS3-203ENST00000398405 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.18
TMPRSS3-203ENST00000398405 CCDC180Q9P1Z9 1646 aa22.26■■□□□ 1.15
TMPRSS3-203ENST00000398405 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
TMPRSS3-203ENST00000398405 TRIM26Q12899 539 aaPredicted RBP22.21■■□□□ 1.15
TMPRSS3-203ENST00000398405 TTBK1Q5TCY1 1321 aaPredicted RBP21.97■■□□□ 1.11
TMPRSS3-203ENST00000398405 ZCCHC6Q5VYS8 1495 aaKnown RBP21.86■■□□□ 1.09
TMPRSS3-203ENST00000398405 ACIN1Q9UKV3 1341 aaKnown RBP21.85■■□□□ 1.09
TMPRSS3-203ENST00000398405 LOC105371045A0A1W2PR82 267 aa21.81■■□□□ 1.08
TMPRSS3-203ENST00000398405 NEUROD1Q13562 356 aa21.67■■□□□ 1.06
TMPRSS3-203ENST00000398405 GTF3C3Q9Y5Q9 886 aa21.57■■□□□ 1.04
TMPRSS3-203ENST00000398405 CENPBP07199 599 aaPredicted RBP21.55■■□□□ 1.04
TMPRSS3-203ENST00000398405 DIEXFQ68CQ4 756 aaKnown RBP21.27■■□□□ 1
TMPRSS3-203ENST00000398405 DCAF8L2P0C7V8 631 aa21.24■□□□□ 0.99
TMPRSS3-203ENST00000398405 BCL11AQ9H165 835 aa21.2■□□□□ 0.98
TMPRSS3-203ENST00000398405 PRKCSHP14314 528 aaPredicted RBP21.18■□□□□ 0.98
TMPRSS3-203ENST00000398405 TRIM41Q8WV44 630 aa21.06■□□□□ 0.96
TMPRSS3-203ENST00000398405 CCER1Q8TC90 406 aaPredicted RBP21.05■□□□□ 0.96
TMPRSS3-203ENST00000398405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.01■□□□□ 0.95
TMPRSS3-203ENST00000398405 FAM9AQ8IZU1 332 aaPredicted RBP20.98■□□□□ 0.95
TMPRSS3-203ENST00000398405 ABCC9O60706 1549 aa20.92■□□□□ 0.94
TMPRSS3-203ENST00000398405 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
TMPRSS3-203ENST00000398405 CLSPNQ9HAW4 1339 aa20.81■□□□□ 0.92
TMPRSS3-203ENST00000398405 ERICH6Q7L0X2 663 aa20.79■□□□□ 0.92
TMPRSS3-203ENST00000398405 ANP32EQ9BTT0 268 aa20.77■□□□□ 0.92
TMPRSS3-203ENST00000398405 YTHDC1Q96MU7 727 aaKnown RBP20.71■□□□□ 0.91
TMPRSS3-203ENST00000398405 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
TMPRSS3-203ENST00000398405 MIER1Q8N108 512 aa20.65■□□□□ 0.9
TMPRSS3-203ENST00000398405 APLP2Q06481 763 aa20.65■□□□□ 0.9
TMPRSS3-203ENST00000398405 RB1CC1Q8TDY2 1594 aa20.61■□□□□ 0.89
TMPRSS3-203ENST00000398405 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
TMPRSS3-203ENST00000398405 SUPT16HQ9Y5B9 1047 aaKnown RBP20.54■□□□□ 0.88
TMPRSS3-203ENST00000398405 TSHZ2Q9NRE2 1034 aa20.53■□□□□ 0.88
TMPRSS3-203ENST00000398405 EHMT2Q96KQ7 1210 aa20.45■□□□□ 0.86
TMPRSS3-203ENST00000398405 CSRNP3Q8WYN3 585 aa20.43■□□□□ 0.86
TMPRSS3-203ENST00000398405 CEP162Q5TB80 1403 aa20.23■□□□□ 0.83
TMPRSS3-203ENST00000398405 TNIKQ9UKE5 1360 aa20.18■□□□□ 0.82
TMPRSS3-203ENST00000398405 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
TMPRSS3-203ENST00000398405 EIF4G1Q04637 1599 aaKnown RBP20.11■□□□□ 0.81
TMPRSS3-203ENST00000398405 NACADO15069 1562 aa20.07■□□□□ 0.8
TMPRSS3-203ENST00000398405 RBM19Q9Y4C8 960 aaKnown RBP20.02■□□□□ 0.8
TMPRSS3-203ENST00000398405 EEA1Q15075 1411 aa19.98■□□□□ 0.79
TMPRSS3-203ENST00000398405 HNRNPUL2Q1KMD3 747 aaKnown RBP19.94■□□□□ 0.78
TMPRSS3-203ENST00000398405 MROH2BQ7Z745 1585 aa19.91■□□□□ 0.78
TMPRSS3-203ENST00000398405 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.78
TMPRSS3-203ENST00000398405 MYT1LQ9UL68 1186 aa19.89■□□□□ 0.78
TMPRSS3-203ENST00000398405 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
TMPRSS3-203ENST00000398405 BAZ1AQ9NRL2 1556 aaPredicted RBP19.86■□□□□ 0.77
TMPRSS3-203ENST00000398405 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
TMPRSS3-203ENST00000398405 FKBP8Q14318 412 aa19.85■□□□□ 0.77
TMPRSS3-203ENST00000398405 MSH5O43196 834 aa19.84■□□□□ 0.77
TMPRSS3-203ENST00000398405 GOLGA3Q08378 1498 aa19.84■□□□□ 0.77
TMPRSS3-203ENST00000398405 FANCIQ9NVI1 1328 aa19.84■□□□□ 0.77
TMPRSS3-203ENST00000398405 WIZO95785 1651 aa19.84■□□□□ 0.77
TMPRSS3-203ENST00000398405 ABCC8Q09428 1581 aa19.83■□□□□ 0.76
TMPRSS3-203ENST00000398405 DHX57Q6P158 1386 aaKnown RBP19.82■□□□□ 0.76
TMPRSS3-203ENST00000398405 SOGA1O94964 1423 aa19.81■□□□□ 0.76
TMPRSS3-203ENST00000398405 BCANQ96GW7 911 aa19.81■□□□□ 0.76
TMPRSS3-203ENST00000398405 UBTFP17480 764 aaKnown RBP19.77■□□□□ 0.76
TMPRSS3-203ENST00000398405 NEFLP07196 543 aa19.75■□□□□ 0.75
TMPRSS3-203ENST00000398405 UNC13AQ9UPW8 1703 aa19.73■□□□□ 0.75
TMPRSS3-203ENST00000398405 VPS8Q8N3P4 1428 aa19.72■□□□□ 0.75
TMPRSS3-203ENST00000398405 ANO8Q9HCE9 1232 aaPredicted RBP19.72■□□□□ 0.75
TMPRSS3-203ENST00000398405 KCNH8Q96L42 1107 aa19.69■□□□□ 0.74
TMPRSS3-203ENST00000398405 CLIP1P30622 1438 aa19.68■□□□□ 0.74
TMPRSS3-203ENST00000398405 RUSC2Q8N2Y8 1516 aa19.64■□□□□ 0.74
TMPRSS3-203ENST00000398405 CEP164Q9UPV0 1460 aa19.62■□□□□ 0.73
TMPRSS3-203ENST00000398405 KIF21BO75037 1637 aa19.62■□□□□ 0.73
TMPRSS3-203ENST00000398405 UBE2Q2Q8WVN8 375 aa19.6■□□□□ 0.73
TMPRSS3-203ENST00000398405 CUX2O14529 1486 aa19.58■□□□□ 0.73
TMPRSS3-203ENST00000398405 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
TMPRSS3-203ENST00000398405 DEKP35659 375 aaKnown RBP19.58■□□□□ 0.72
TMPRSS3-203ENST00000398405 ITGAEP38570 1179 aa19.55■□□□□ 0.72
TMPRSS3-203ENST00000398405 SLC24A1O60721 1099 aa19.55■□□□□ 0.72
TMPRSS3-203ENST00000398405 CCER2I3L3R5 266 aa19.55■□□□□ 0.72
TMPRSS3-203ENST00000398405 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
TMPRSS3-203ENST00000398405 ERICH6BQ5W0A0 696 aa19.54■□□□□ 0.72
TMPRSS3-203ENST00000398405 CDK11AQ9UQ88 783 aaPredicted RBP19.52■□□□□ 0.72
TMPRSS3-203ENST00000398405 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
TMPRSS3-203ENST00000398405 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
TMPRSS3-203ENST00000398405 RRBP1Q9P2E9 1410 aaKnown RBP19.45■□□□□ 0.7
TMPRSS3-203ENST00000398405 PPP1R15AO75807 674 aaPredicted RBP19.44■□□□□ 0.7
TMPRSS3-203ENST00000398405 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
TMPRSS3-203ENST00000398405 EIF5BO60841 1220 aaKnown RBP19.38■□□□□ 0.69
TMPRSS3-203ENST00000398405 SALL2Q9Y467 1007 aaPredicted RBP19.38■□□□□ 0.69
TMPRSS3-203ENST00000398405 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
TMPRSS3-203ENST00000398405 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
TMPRSS3-203ENST00000398405 ANP32CO43423 234 aa19.32■□□□□ 0.68
TMPRSS3-203ENST00000398405 TIMELESSQ9UNS1 1208 aa19.3■□□□□ 0.68
TMPRSS3-203ENST00000398405 RAPGEF2Q9Y4G8 1499 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms