RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 OCR1Q9BZK8 76 aa8.84□□□□□ -0.99
COLCA2-201ENST00000398035 TRAV7A0A075B6U4 112 aa8.83□□□□□ -1
COLCA2-201ENST00000398035 RPS28P62857 69 aaKnown RBP8.83□□□□□ -1
COLCA2-201ENST00000398035 LCE2BO14633 110 aa8.82□□□□□ -1
COLCA2-201ENST00000398035 LCA10Q71F78 164 aa8.81□□□□□ -1
COLCA2-201ENST00000398035 LINC00208Q96KT6 92 aa8.8□□□□□ -1
COLCA2-201ENST00000398035 SVIPQ8NHG7 77 aa8.8□□□□□ -1
COLCA2-201ENST00000398035 USH2AO75445 5202 aa8.77□□□□□ -1.01
COLCA2-201ENST00000398035 H3BPC8 53 aa8.76□□□□□ -1.01
COLCA2-201ENST00000398035 A8MUN3 132 aa8.75□□□□□ -1.01
COLCA2-201ENST00000398035 KLKP1Q107X0 134 aa8.72□□□□□ -1.01
COLCA2-201ENST00000398035 C20orf197Q8N268 126 aa8.71□□□□□ -1.01
COLCA2-201ENST00000398035 KRTAP3-3Q9BYR6 98 aa8.71□□□□□ -1.01
COLCA2-201ENST00000398035 KRTAP3-2Q9BYR7 98 aa8.71□□□□□ -1.01
COLCA2-201ENST00000398035 NDUFC1O43677 76 aa8.71□□□□□ -1.02
COLCA2-201ENST00000398035 CYSTM1Q9H1C7 97 aa8.71□□□□□ -1.02
COLCA2-201ENST00000398035 ATP5EP56381 51 aaPredicted RBP8.66□□□□□ -1.02
COLCA2-201ENST00000398035 H7BZZ5 65 aa8.63□□□□□ -1.03
COLCA2-201ENST00000398035 SSPOA2VEC9 5147 aa8.63□□□□□ -1.03
COLCA2-201ENST00000398035 KRTAP19-1Q8IUB9 90 aa8.61□□□□□ -1.03
COLCA2-201ENST00000398035 SERP1Q9Y6X1 66 aa8.61□□□□□ -1.03
COLCA2-201ENST00000398035 SNURFQ9Y675 71 aa8.55□□□□□ -1.04
COLCA2-201ENST00000398035 H0YAA0 97 aa8.54□□□□□ -1.04
COLCA2-201ENST00000398035 KRTAP19-6Q3LI70 58 aa8.54□□□□□ -1.04
COLCA2-201ENST00000398035 CRIPTQ9P021 101 aa8.54□□□□□ -1.04
COLCA2-201ENST00000398035 SPRR2GQ9BYE4 73 aa8.51□□□□□ -1.05
COLCA2-201ENST00000398035 DMAC1Q96GE9 116 aa8.5□□□□□ -1.05
COLCA2-201ENST00000398035 FCGBPQ9Y6R7 5405 aaPredicted RBP8.46□□□□□ -1.06
COLCA2-201ENST00000398035 SMIM26A0A096LP01 95 aa8.46□□□□□ -1.06
COLCA2-201ENST00000398035 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.43□□□□□ -1.06
COLCA2-201ENST00000398035 Q5VV11 94 aa8.43□□□□□ -1.06
COLCA2-201ENST00000398035 KRTAP19-8Q3LI54 63 aa8.4□□□□□ -1.06
COLCA2-201ENST00000398035 ACYP2P14621 99 aa8.39□□□□□ -1.07
COLCA2-201ENST00000398035 ADM2Q7Z4H4 148 aa8.38□□□□□ -1.07
COLCA2-201ENST00000398035 MT1BP07438 61 aa8.33□□□□□ -1.08
COLCA2-201ENST00000398035 SPTSSBQ8NFR3 76 aa8.29□□□□□ -1.08
COLCA2-201ENST00000398035 KRTAP9-7A8MTY7 169 aa8.29□□□□□ -1.08
COLCA2-201ENST00000398035 SPANXA2-OT1Q8N9U9 137 aa8.26□□□□□ -1.09
COLCA2-201ENST00000398035 A6NN06 94 aa8.25□□□□□ -1.09
COLCA2-201ENST00000398035 CHKB-CPT1BH3BT56 60 aa8.22□□□□□ -1.09
COLCA2-201ENST00000398035 R4GN34 69 aa8.21□□□□□ -1.09
COLCA2-201ENST00000398035 P0C880 135 aa8.17□□□□□ -1.1
COLCA2-201ENST00000398035 PRO0628Q9UI54 55 aa8.17□□□□□ -1.1
COLCA2-201ENST00000398035 KRTAP10-5P60370 271 aa8.15□□□□□ -1.1
COLCA2-201ENST00000398035 Q1T7F1 81 aa8.15□□□□□ -1.1
COLCA2-201ENST00000398035 V9GYY9 64 aa8.15□□□□□ -1.1
COLCA2-201ENST00000398035 MACF1Q9UPN3 7388 aaKnown RBP8.11□□□□□ -1.11
COLCA2-201ENST00000398035 M0QZ58 72 aa8.11□□□□□ -1.11
COLCA2-201ENST00000398035 PLAC4Q8WY50 150 aa8.1□□□□□ -1.11
COLCA2-201ENST00000398035 PRO2289Q9P1D8 64 aa8.03□□□□□ -1.12
COLCA2-201ENST00000398035 SYNE2Q8WXH0 6885 aaKnown RBP8.02□□□□□ -1.13
COLCA2-201ENST00000398035 KRTAP6-3Q3LI67 103 aa8.01□□□□□ -1.13
COLCA2-201ENST00000398035 BRK1Q8WUW1 75 aa8.01□□□□□ -1.13
COLCA2-201ENST00000398035 LINC01554Q52M75 96 aa7.96□□□□□ -1.13
COLCA2-201ENST00000398035 COA5Q86WW8 74 aa7.95□□□□□ -1.14
COLCA2-201ENST00000398035 PSPHP1O15172 72 aa7.89□□□□□ -1.15
COLCA2-201ENST00000398035 MT1XP80297 61 aa7.86□□□□□ -1.15
COLCA2-201ENST00000398035 SEC61GP60059 68 aa7.86□□□□□ -1.15
COLCA2-201ENST00000398035 PRR15LQ9BU68 103 aa7.84□□□□□ -1.15
COLCA2-201ENST00000398035 LINC01558Q9Y6Z2 57 aa7.84□□□□□ -1.15
COLCA2-201ENST00000398035 KRTAP12-2P59991 146 aa7.71□□□□□ -1.17
COLCA2-201ENST00000398035 A6NED7 52 aa7.7□□□□□ -1.18
COLCA2-201ENST00000398035 KRTAP5-9P26371 169 aa7.7□□□□□ -1.18
COLCA2-201ENST00000398035 KRTAP13-4Q3LI77 160 aa7.69□□□□□ -1.18
COLCA2-201ENST00000398035 CDC42SE1Q9NRR8 79 aa7.69□□□□□ -1.18
COLCA2-201ENST00000398035 A0A1B0GU33 70 aa7.65□□□□□ -1.18
COLCA2-201ENST00000398035 PMAIP1Q13794 54 aa7.61□□□□□ -1.19
COLCA2-201ENST00000398035 A0A1B0GU69 56 aa7.6□□□□□ -1.19
COLCA2-201ENST00000398035 CAMK2N1Q7Z7J9 78 aa7.58□□□□□ -1.2
COLCA2-201ENST00000398035 KRTAP8-1Q8IUC2 63 aa7.57□□□□□ -1.2
COLCA2-201ENST00000398035 MUC12Q9UKN1 5478 aa7.55□□□□□ -1.2
COLCA2-201ENST00000398035 A8MU10 97 aa7.53□□□□□ -1.2
COLCA2-201ENST00000398035 SPATA8Q6RVD6 105 aa7.53□□□□□ -1.2
COLCA2-201ENST00000398035 A0A0D9SG42 100 aa7.52□□□□□ -1.2
COLCA2-201ENST00000398035 KMT2DO14686 5537 aa7.52□□□□□ -1.21
COLCA2-201ENST00000398035 KRTAP10-12P60413 245 aa7.52□□□□□ -1.21
COLCA2-201ENST00000398035 NEBP20929 6669 aa7.5□□□□□ -1.21
COLCA2-201ENST00000398035 KRTAP10-7P60409 375 aaPredicted RBP7.5□□□□□ -1.21
COLCA2-201ENST00000398035 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
COLCA2-201ENST00000398035 KTN1-AS1Q86SY8 53 aa7.49□□□□□ -1.21
COLCA2-201ENST00000398035 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
COLCA2-201ENST00000398035 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
COLCA2-201ENST00000398035 SPINT4Q6UDR6 99 aa7.44□□□□□ -1.22
COLCA2-201ENST00000398035 UQCR11O14957 56 aa7.42□□□□□ -1.22
COLCA2-201ENST00000398035 MDN1Q9NU22 5596 aa7.4□□□□□ -1.22
COLCA2-201ENST00000398035 KRTAP12-1P59990 96 aa7.37□□□□□ -1.23
COLCA2-201ENST00000398035 MIR22HGQ0VDD5 57 aa7.35□□□□□ -1.23
COLCA2-201ENST00000398035 SPRR2EP22531 72 aa7.34□□□□□ -1.23
COLCA2-201ENST00000398035 SPRR2BP35325 72 aa7.34□□□□□ -1.23
COLCA2-201ENST00000398035 SPRR2AP35326 72 aa7.34□□□□□ -1.23
COLCA2-201ENST00000398035 KRTAP20-1Q3LI63 56 aa7.29□□□□□ -1.24
COLCA2-201ENST00000398035 LCE1AQ5T7P2 110 aa7.27□□□□□ -1.25
COLCA2-201ENST00000398035 KRTAP2-3P0C7H8 128 aa7.2□□□□□ -1.26
COLCA2-201ENST00000398035 KRTAP2-4Q9BYR9 128 aa7.2□□□□□ -1.26
COLCA2-201ENST00000398035 SPRR2DP22532 72 aa7.1□□□□□ -1.27
COLCA2-201ENST00000398035 TNP1P09430 55 aa7.06□□□□□ -1.28
COLCA2-201ENST00000398035 KRTAP19-7Q3SYF9 63 aa7.03□□□□□ -1.28
COLCA2-201ENST00000398035 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
COLCA2-201ENST00000398035 K7ERS5 55 aa7□□□□□ -1.29
COLCA2-201ENST00000398035 PRAC1Q96KF2 57 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms