RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 KRTAP10-4P60372 401 aaPredicted RBP7.18□□□□□ -1.26
COL6A2-203ENST00000397763 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
COL6A2-203ENST00000397763 P0C880 135 aa7.16□□□□□ -1.26
COL6A2-203ENST00000397763 KMT2CQ8NEZ4 4911 aaKnown RBP7.15□□□□□ -1.27
COL6A2-203ENST00000397763 C10orf95Q9H7T3 257 aa7.14□□□□□ -1.27
COL6A2-203ENST00000397763 KRTAP13-4Q3LI77 160 aa7.12□□□□□ -1.27
COL6A2-203ENST00000397763 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
COL6A2-203ENST00000397763 RPL37P61927 97 aaKnown RBP7.1□□□□□ -1.27
COL6A2-203ENST00000397763 FAT3Q8TDW7 4589 aa7.1□□□□□ -1.27
COL6A2-203ENST00000397763 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
COL6A2-203ENST00000397763 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
COL6A2-203ENST00000397763 KRTAP10-6P60371 365 aaPredicted RBP7.06□□□□□ -1.28
COL6A2-203ENST00000397763 TPRXLQ17RH7 258 aa7.05□□□□□ -1.28
COL6A2-203ENST00000397763 KRTAP21-3Q3LHN1 58 aa7.05□□□□□ -1.28
COL6A2-203ENST00000397763 LPAP08519 4548 aa7.04□□□□□ -1.28
COL6A2-203ENST00000397763 RYR2Q92736 4967 aa7.03□□□□□ -1.28
COL6A2-203ENST00000397763 TNXBP22105 4242 aa7□□□□□ -1.29
COL6A2-203ENST00000397763 KRTAP3-2Q9BYR7 98 aa6.99□□□□□ -1.29
COL6A2-203ENST00000397763 NDUFAF8A1L188 74 aa6.98□□□□□ -1.29
COL6A2-203ENST00000397763 S4R3F8 94 aa6.97□□□□□ -1.29
COL6A2-203ENST00000397763 XP32Q5T750 250 aa6.96□□□□□ -1.29
COL6A2-203ENST00000397763 Q5VSD8 79 aa6.93□□□□□ -1.3
COL6A2-203ENST00000397763 LRP2P98164 4655 aa6.93□□□□□ -1.3
COL6A2-203ENST00000397763 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
COL6A2-203ENST00000397763 KIAA1109Q2LD37 5005 aa6.91□□□□□ -1.3
COL6A2-203ENST00000397763 KRTAP12-2P59991 146 aa6.9□□□□□ -1.3
COL6A2-203ENST00000397763 RYR3Q15413 4870 aa6.83□□□□□ -1.32
COL6A2-203ENST00000397763 RYR1P21817 5038 aa6.81□□□□□ -1.32
COL6A2-203ENST00000397763 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
COL6A2-203ENST00000397763 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
COL6A2-203ENST00000397763 ABCA13Q86UQ4 5058 aa6.75□□□□□ -1.33
COL6A2-203ENST00000397763 LUZP6Q538Z0 58 aa6.71□□□□□ -1.34
COL6A2-203ENST00000397763 MT1HL1P0DM35 61 aa6.71□□□□□ -1.34
COL6A2-203ENST00000397763 EPPK1P58107 5090 aaKnown RBP6.63□□□□□ -1.35
COL6A2-203ENST00000397763 M0QZ58 72 aa6.63□□□□□ -1.35
COL6A2-203ENST00000397763 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
COL6A2-203ENST00000397763 R4GN34 69 aa6.55□□□□□ -1.36
COL6A2-203ENST00000397763 KRTAP4-5Q9BYR2 181 aa6.54□□□□□ -1.36
COL6A2-203ENST00000397763 MUC2Q02817 5179 aa6.52□□□□□ -1.36
COL6A2-203ENST00000397763 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
COL6A2-203ENST00000397763 KRTAP4-1Q9BYQ7 146 aa6.42□□□□□ -1.38
COL6A2-203ENST00000397763 SEC61BP60468 96 aaKnown RBP6.38□□□□□ -1.39
COL6A2-203ENST00000397763 MUC17Q685J3 4493 aa6.37□□□□□ -1.39
COL6A2-203ENST00000397763 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
COL6A2-203ENST00000397763 HERC2O95714 4834 aa6.25□□□□□ -1.41
COL6A2-203ENST00000397763 J3QL48 77 aa6.24□□□□□ -1.41
COL6A2-203ENST00000397763 FAT4Q6V0I7 4981 aa6.17□□□□□ -1.42
COL6A2-203ENST00000397763 PCLOQ9Y6V0 5065 aa6.15□□□□□ -1.42
COL6A2-203ENST00000397763 KRTAP19-2Q3LHN2 52 aa6.14□□□□□ -1.43
COL6A2-203ENST00000397763 HERC1Q15751 4861 aa6.1□□□□□ -1.43
COL6A2-203ENST00000397763 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
COL6A2-203ENST00000397763 FLGP20930 4061 aaPredicted RBP6.02□□□□□ -1.45
COL6A2-203ENST00000397763 RNF213Q63HN8 5207 aa6□□□□□ -1.45
COL6A2-203ENST00000397763 TNP1P09430 55 aa5.97□□□□□ -1.45
COL6A2-203ENST00000397763 BIRC6Q9NR09 4857 aa5.92□□□□□ -1.46
COL6A2-203ENST00000397763 M0R2T5 61 aa5.84□□□□□ -1.47
COL6A2-203ENST00000397763 HMCN2Q8NDA2 5059 aa5.83□□□□□ -1.48
COL6A2-203ENST00000397763 UBR4Q5T4S7 5183 aa5.82□□□□□ -1.48
COL6A2-203ENST00000397763 LCE2CQ5TA81 110 aa5.76□□□□□ -1.49
COL6A2-203ENST00000397763 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
COL6A2-203ENST00000397763 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
COL6A2-203ENST00000397763 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
COL6A2-203ENST00000397763 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
COL6A2-203ENST00000397763 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
COL6A2-203ENST00000397763 SPRR2GQ9BYE4 73 aa5.65□□□□□ -1.5
COL6A2-203ENST00000397763 MT1FP04733 61 aa5.63□□□□□ -1.51
COL6A2-203ENST00000397763 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
COL6A2-203ENST00000397763 MT1HP80294 61 aa5.61□□□□□ -1.51
COL6A2-203ENST00000397763 MT2AP02795 61 aa5.58□□□□□ -1.52
COL6A2-203ENST00000397763 KRTAP9-8Q9BYQ0 159 aa5.49□□□□□ -1.53
COL6A2-203ENST00000397763 USH2AO75445 5202 aa5.46□□□□□ -1.54
COL6A2-203ENST00000397763 KMT2DO14686 5537 aa5.43□□□□□ -1.54
COL6A2-203ENST00000397763 KRTAP10-5P60370 271 aa5.43□□□□□ -1.54
COL6A2-203ENST00000397763 MT1XP80297 61 aa5.42□□□□□ -1.54
COL6A2-203ENST00000397763 MT1BP07438 61 aa5.41□□□□□ -1.54
COL6A2-203ENST00000397763 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
COL6A2-203ENST00000397763 KRTAP8-1Q8IUC2 63 aa5.38□□□□□ -1.55
COL6A2-203ENST00000397763 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
COL6A2-203ENST00000397763 INE1O15225 51 aa5.36□□□□□ -1.55
COL6A2-203ENST00000397763 KRTAP10-12P60413 245 aa5.36□□□□□ -1.55
COL6A2-203ENST00000397763 KRTAP19-8Q3LI54 63 aa5.34□□□□□ -1.56
COL6A2-203ENST00000397763 KRTAP9-3Q9BYQ3 159 aa5.22□□□□□ -1.57
COL6A2-203ENST00000397763 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
COL6A2-203ENST00000397763 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
COL6A2-203ENST00000397763 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
COL6A2-203ENST00000397763 KRTAP4-8Q9BYQ9 185 aa5.13□□□□□ -1.59
COL6A2-203ENST00000397763 LCE2BO14633 110 aa5.1□□□□□ -1.59
COL6A2-203ENST00000397763 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
COL6A2-203ENST00000397763 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
COL6A2-203ENST00000397763 KRTAP9-6A8MVA2 160 aa4.99□□□□□ -1.61
COL6A2-203ENST00000397763 KRTAP19-7Q3SYF9 63 aa4.82□□□□□ -1.64
COL6A2-203ENST00000397763 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
COL6A2-203ENST00000397763 LCE2AQ5TA79 106 aaPredicted RBP4.73□□□□□ -1.65
COL6A2-203ENST00000397763 MUC12Q9UKN1 5478 aa4.72□□□□□ -1.65
COL6A2-203ENST00000397763 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.65
COL6A2-203ENST00000397763 MT1LQ93083 61 aa4.68□□□□□ -1.66
COL6A2-203ENST00000397763 FCGBPQ9Y6R7 5405 aaPredicted RBP4.68□□□□□ -1.66
COL6A2-203ENST00000397763 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
COL6A2-203ENST00000397763 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
COL6A2-203ENST00000397763 KRTAP2-3P0C7H8 128 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms