RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 S4R3F8 94 aa10.43□□□□□ -0.74
CPNE1-204ENST00000397443 FLGP20930 4061 aaPredicted RBP10.43□□□□□ -0.74
CPNE1-204ENST00000397443 CHKB-CPT1BH3BT56 60 aa10.42□□□□□ -0.74
CPNE1-204ENST00000397443 LCA10Q71F78 164 aa10.41□□□□□ -0.74
CPNE1-204ENST00000397443 KRTAP3-3Q9BYR6 98 aa10.31□□□□□ -0.76
CPNE1-204ENST00000397443 MT1HP80294 61 aa10.31□□□□□ -0.76
CPNE1-204ENST00000397443 SERP1Q9Y6X1 66 aa10.31□□□□□ -0.76
CPNE1-204ENST00000397443 M0R2T5 61 aa10.27□□□□□ -0.76
CPNE1-204ENST00000397443 CSAG1Q6PB30 78 aa10.22□□□□□ -0.77
CPNE1-204ENST00000397443 SPTSSBQ8NFR3 76 aa10.19□□□□□ -0.78
CPNE1-204ENST00000397443 RPS28P62857 69 aaKnown RBP10.09□□□□□ -0.79
CPNE1-204ENST00000397443 LCE2AQ5TA79 106 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-204ENST00000397443 SMIM26A0A096LP01 95 aa9.98□□□□□ -0.81
CPNE1-204ENST00000397443 KRTAP10-6P60371 365 aaPredicted RBP9.96□□□□□ -0.81
CPNE1-204ENST00000397443 ADM2Q7Z4H4 148 aa9.96□□□□□ -0.81
CPNE1-204ENST00000397443 LORP23490 312 aaPredicted RBP9.9□□□□□ -0.83
CPNE1-204ENST00000397443 SEC61GP60059 68 aa9.89□□□□□ -0.83
CPNE1-204ENST00000397443 LINC01558Q9Y6Z2 57 aa9.89□□□□□ -0.83
CPNE1-204ENST00000397443 A0A1B0GU69 56 aa9.88□□□□□ -0.83
CPNE1-204ENST00000397443 H0YAA0 97 aa9.88□□□□□ -0.83
CPNE1-204ENST00000397443 KRTAP3-2Q9BYR7 98 aa9.88□□□□□ -0.83
CPNE1-204ENST00000397443 P0C880 135 aa9.87□□□□□ -0.83
CPNE1-204ENST00000397443 KRTAP9-8Q9BYQ0 159 aa9.87□□□□□ -0.83
CPNE1-204ENST00000397443 Q1T7F1 81 aa9.84□□□□□ -0.83
CPNE1-204ENST00000397443 MT2AP02795 61 aa9.84□□□□□ -0.83
CPNE1-204ENST00000397443 PRR15LQ9BU68 103 aa9.84□□□□□ -0.83
CPNE1-204ENST00000397443 V9GYY9 64 aa9.82□□□□□ -0.84
CPNE1-204ENST00000397443 PSPHP1O15172 72 aa9.81□□□□□ -0.84
CPNE1-204ENST00000397443 MT1FP04733 61 aa9.79□□□□□ -0.84
CPNE1-204ENST00000397443 KRTAP10-10P60014 251 aa9.79□□□□□ -0.84
CPNE1-204ENST00000397443 A0A1B0GU33 70 aa9.66□□□□□ -0.86
CPNE1-204ENST00000397443 Q5VV11 94 aa9.65□□□□□ -0.86
CPNE1-204ENST00000397443 R4GN34 69 aa9.62□□□□□ -0.87
CPNE1-204ENST00000397443 M0QZ58 72 aa9.61□□□□□ -0.87
CPNE1-204ENST00000397443 KRTAP13-4Q3LI77 160 aa9.58□□□□□ -0.88
CPNE1-204ENST00000397443 SPATA8Q6RVD6 105 aa9.58□□□□□ -0.88
CPNE1-204ENST00000397443 CRIPTQ9P021 101 aa9.55□□□□□ -0.88
CPNE1-204ENST00000397443 KRTAP9-3Q9BYQ3 159 aa9.52□□□□□ -0.89
CPNE1-204ENST00000397443 LINC01554Q52M75 96 aa9.51□□□□□ -0.89
CPNE1-204ENST00000397443 UQCR11O14957 56 aa9.5□□□□□ -0.89
CPNE1-204ENST00000397443 KRTAP19-1Q8IUB9 90 aa9.49□□□□□ -0.89
CPNE1-204ENST00000397443 A6NED7 52 aa9.48□□□□□ -0.89
CPNE1-204ENST00000397443 A0A0D9SG42 100 aa9.44□□□□□ -0.9
CPNE1-204ENST00000397443 SPRR2GQ9BYE4 73 aa9.44□□□□□ -0.9
CPNE1-204ENST00000397443 A8MU10 97 aa9.41□□□□□ -0.9
CPNE1-204ENST00000397443 MIR22HGQ0VDD5 57 aa9.4□□□□□ -0.9
CPNE1-204ENST00000397443 LCE2BO14633 110 aa9.33□□□□□ -0.92
CPNE1-204ENST00000397443 KRTAP19-8Q3LI54 63 aa9.23□□□□□ -0.93
CPNE1-204ENST00000397443 SPINT4Q6UDR6 99 aa9.22□□□□□ -0.93
CPNE1-204ENST00000397443 CDC42SE1Q9NRR8 79 aa9.21□□□□□ -0.94
CPNE1-204ENST00000397443 LCE2DQ5TA82 110 aaPredicted RBP9.2□□□□□ -0.94
CPNE1-204ENST00000397443 BRK1Q8WUW1 75 aa9.19□□□□□ -0.94
CPNE1-204ENST00000397443 USH2AO75445 5202 aa9.18□□□□□ -0.94
CPNE1-204ENST00000397443 MT1BP07438 61 aa9.17□□□□□ -0.94
CPNE1-204ENST00000397443 KRTAP12-1P59990 96 aa9.17□□□□□ -0.94
CPNE1-204ENST00000397443 KRTAP12-2P59991 146 aa9.16□□□□□ -0.94
CPNE1-204ENST00000397443 PLAC4Q8WY50 150 aa9.14□□□□□ -0.95
CPNE1-204ENST00000397443 A6NN06 94 aa9.13□□□□□ -0.95
CPNE1-204ENST00000397443 FSIP2Q5CZC0 6907 aa9.09□□□□□ -0.95
CPNE1-204ENST00000397443 KRTAP9-2Q9BYQ4 174 aa9.07□□□□□ -0.96
CPNE1-204ENST00000397443 K7ERS5 55 aa9□□□□□ -0.97
CPNE1-204ENST00000397443 CAMK2N1Q7Z7J9 78 aa9□□□□□ -0.97
CPNE1-204ENST00000397443 PRO0628Q9UI54 55 aa8.95□□□□□ -0.98
CPNE1-204ENST00000397443 SSPOA2VEC9 5147 aa8.95□□□□□ -0.98
CPNE1-204ENST00000397443 MT1XP80297 61 aa8.83□□□□□ -1
CPNE1-204ENST00000397443 KRTAP10-5P60370 271 aa8.8□□□□□ -1
CPNE1-204ENST00000397443 KRTAP19-6Q3LI70 58 aa8.77□□□□□ -1.01
CPNE1-204ENST00000397443 PRO2289Q9P1D8 64 aa8.74□□□□□ -1.01
CPNE1-204ENST00000397443 CRCT1Q9UGL9 99 aa8.7□□□□□ -1.02
CPNE1-204ENST00000397443 C10orf95Q9H7T3 257 aa8.7□□□□□ -1.02
CPNE1-204ENST00000397443 PMAIP1Q13794 54 aa8.66□□□□□ -1.02
CPNE1-204ENST00000397443 FCGBPQ9Y6R7 5405 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-204ENST00000397443 ROMO1P60602 79 aa8.59□□□□□ -1.03
CPNE1-204ENST00000397443 KRTAP10-7P60409 375 aaPredicted RBP8.5□□□□□ -1.05
CPNE1-204ENST00000397443 TNP1P09430 55 aa8.46□□□□□ -1.05
CPNE1-204ENST00000397443 KRTAP9-6A0A140TA67 174 aa8.45□□□□□ -1.06
CPNE1-204ENST00000397443 KRTAP25-1Q3LHN0 102 aa8.37□□□□□ -1.07
CPNE1-204ENST00000397443 KMT2DO14686 5537 aa8.35□□□□□ -1.07
CPNE1-204ENST00000397443 KRTAP10-12P60413 245 aa8.34□□□□□ -1.07
CPNE1-204ENST00000397443 KRTAP4-8A0A0G2JLE6 195 aa8.26□□□□□ -1.09
CPNE1-204ENST00000397443 KRTAP4-8Q9BYQ9 185 aa8.26□□□□□ -1.09
CPNE1-204ENST00000397443 MACF1Q9UPN3 7388 aaKnown RBP8.23□□□□□ -1.09
CPNE1-204ENST00000397443 LCE3AQ5TA76 89 aa8.2□□□□□ -1.1
CPNE1-204ENST00000397443 PRAC1Q96KF2 57 aa8.19□□□□□ -1.1
CPNE1-204ENST00000397443 KTN1-AS1Q86SY8 53 aa8.16□□□□□ -1.1
CPNE1-204ENST00000397443 SYNE2Q8WXH0 6885 aaKnown RBP8.07□□□□□ -1.12
CPNE1-204ENST00000397443 KRTAP8-1Q8IUC2 63 aa8.07□□□□□ -1.12
CPNE1-204ENST00000397443 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.06□□□□□ -1.12
CPNE1-204ENST00000397443 KRTAP23-1A1A580 65 aa8□□□□□ -1.13
CPNE1-204ENST00000397443 PP632Q6XCG6 107 aa7.99□□□□□ -1.13
CPNE1-204ENST00000397443 KRTAP19-5Q3LI72 72 aa7.95□□□□□ -1.14
CPNE1-204ENST00000397443 KRTAP19-7Q3SYF9 63 aa7.87□□□□□ -1.15
CPNE1-204ENST00000397443 KRTAP12-3P60328 96 aa7.86□□□□□ -1.15
CPNE1-204ENST00000397443 SPRR2FQ96RM1 72 aa7.85□□□□□ -1.15
CPNE1-204ENST00000397443 MUC12Q9UKN1 5478 aa7.78□□□□□ -1.16
CPNE1-204ENST00000397443 MT1EP04732 61 aa7.75□□□□□ -1.17
CPNE1-204ENST00000397443 KRTAP5-9P26371 169 aa7.74□□□□□ -1.17
CPNE1-204ENST00000397443 KRTAP6-3Q3LI67 103 aa7.74□□□□□ -1.17
CPNE1-204ENST00000397443 KRTAP9-7A8MTY7 169 aa7.72□□□□□ -1.17
CPNE1-204ENST00000397443 KRTAP15-1Q3LI76 137 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms