RNA–Protein interactions for RNA: ENST00000397174.6

SCMH1-209, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCMH1, Length 2,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-209ENST00000397174 DNAH5Q8TE73 4624 aa5.5□□□□□ -1.53
SCMH1-209ENST00000397174 C9orf92A6NGG3 77 aa5.49□□□□□ -1.53
SCMH1-209ENST00000397174 KRTAP10-6P60371 365 aaPredicted RBP5.48□□□□□ -1.53
SCMH1-209ENST00000397174 VPS13BQ7Z7G8 4022 aa5.42□□□□□ -1.54
SCMH1-209ENST00000397174 PKHD1P08F94 4074 aa5.42□□□□□ -1.54
SCMH1-209ENST00000397174 DMBT1Q9UGM3 2413 aaPredicted RBP5.42□□□□□ -1.54
SCMH1-209ENST00000397174 FAT2Q9NYQ8 4349 aa5.42□□□□□ -1.54
SCMH1-209ENST00000397174 KRTAP10-1P60331 282 aa5.41□□□□□ -1.54
SCMH1-209ENST00000397174 S4R3F8 94 aa5.41□□□□□ -1.54
SCMH1-209ENST00000397174 PKD1P98161 4303 aa5.4□□□□□ -1.55
SCMH1-209ENST00000397174 RYR3Q15413 4870 aa5.39□□□□□ -1.55
SCMH1-209ENST00000397174 SACSQ9NZJ4 4579 aa5.38□□□□□ -1.55
SCMH1-209ENST00000397174 KRTAP12-2P59991 146 aa5.38□□□□□ -1.55
SCMH1-209ENST00000397174 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
SCMH1-209ENST00000397174 RPS29P62273 56 aaKnown RBP5.32□□□□□ -1.56
SCMH1-209ENST00000397174 FAT1Q14517 4588 aa5.31□□□□□ -1.56
SCMH1-209ENST00000397174 LORP23490 312 aaPredicted RBP5.31□□□□□ -1.56
SCMH1-209ENST00000397174 XP32Q5T750 250 aa5.31□□□□□ -1.56
SCMH1-209ENST00000397174 SMR3BP02814 79 aaPredicted RBP5.3□□□□□ -1.56
SCMH1-209ENST00000397174 RYR2Q92736 4967 aa5.3□□□□□ -1.56
SCMH1-209ENST00000397174 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
SCMH1-209ENST00000397174 DYNC1H1Q14204 4646 aaKnown RBP5.24□□□□□ -1.57
SCMH1-209ENST00000397174 EPPK1P58107 5090 aaKnown RBP5.23□□□□□ -1.57
SCMH1-209ENST00000397174 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
SCMH1-209ENST00000397174 KRTAP10-8P60410 259 aa5.18□□□□□ -1.58
SCMH1-209ENST00000397174 PKHD1L1Q86WI1 4243 aa5.17□□□□□ -1.58
SCMH1-209ENST00000397174 PLAC4Q8WY50 150 aa5.17□□□□□ -1.58
SCMH1-209ENST00000397174 APOBP04114 4563 aaKnown RBP5.13□□□□□ -1.59
SCMH1-209ENST00000397174 KIAA1109Q2LD37 5005 aa5.13□□□□□ -1.59
SCMH1-209ENST00000397174 LRP1Q07954 4544 aaKnown RBP5.11□□□□□ -1.59
SCMH1-209ENST00000397174 MYCBP2O75592 4640 aa5.08□□□□□ -1.6
SCMH1-209ENST00000397174 M0QZ58 72 aa5.07□□□□□ -1.6
SCMH1-209ENST00000397174 A0A1B0GVY2 172 aa5.04□□□□□ -1.6
SCMH1-209ENST00000397174 HSPG2P98160 4391 aa5.03□□□□□ -1.6
SCMH1-209ENST00000397174 KRTAP10-4P60372 401 aaPredicted RBP5.03□□□□□ -1.6
SCMH1-209ENST00000397174 FAT3Q8TDW7 4589 aa5□□□□□ -1.61
SCMH1-209ENST00000397174 CAMK2N1Q7Z7J9 78 aa4.98□□□□□ -1.61
SCMH1-209ENST00000397174 BIRC6Q9NR09 4857 aa4.96□□□□□ -1.62
SCMH1-209ENST00000397174 KRTAP17-1Q9BYP8 105 aa4.94□□□□□ -1.62
SCMH1-209ENST00000397174 TNXBP22105 4242 aa4.94□□□□□ -1.62
SCMH1-209ENST00000397174 RYR1P21817 5038 aa4.94□□□□□ -1.62
SCMH1-209ENST00000397174 Q5VSD8 79 aa4.89□□□□□ -1.63
SCMH1-209ENST00000397174 R4GN34 69 aa4.89□□□□□ -1.63
SCMH1-209ENST00000397174 ABCA13Q86UQ4 5058 aa4.89□□□□□ -1.63
SCMH1-209ENST00000397174 KRTAP4-5Q9BYR2 181 aa4.89□□□□□ -1.63
SCMH1-209ENST00000397174 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
SCMH1-209ENST00000397174 LPAP08519 4548 aa4.86□□□□□ -1.63
SCMH1-209ENST00000397174 HERC2O95714 4834 aa4.86□□□□□ -1.63
SCMH1-209ENST00000397174 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
SCMH1-209ENST00000397174 LRP2P98164 4655 aa4.82□□□□□ -1.64
SCMH1-209ENST00000397174 HERC1Q15751 4861 aa4.76□□□□□ -1.65
SCMH1-209ENST00000397174 MT1HL1P0DM35 61 aa4.72□□□□□ -1.65
SCMH1-209ENST00000397174 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.65
SCMH1-209ENST00000397174 PRO2289Q9P1D8 64 aa4.66□□□□□ -1.66
SCMH1-209ENST00000397174 MUC2Q02817 5179 aa4.59□□□□□ -1.67
SCMH1-209ENST00000397174 TNP1P09430 55 aa4.56□□□□□ -1.68
SCMH1-209ENST00000397174 UBR4Q5T4S7 5183 aa4.52□□□□□ -1.69
SCMH1-209ENST00000397174 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
SCMH1-209ENST00000397174 INE1O15225 51 aa4.49□□□□□ -1.69
SCMH1-209ENST00000397174 MUC17Q685J3 4493 aa4.47□□□□□ -1.69
SCMH1-209ENST00000397174 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
SCMH1-209ENST00000397174 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.7
SCMH1-209ENST00000397174 FAT4Q6V0I7 4981 aa4.35□□□□□ -1.71
SCMH1-209ENST00000397174 KRTAP19-2Q3LHN2 52 aa4.34□□□□□ -1.71
SCMH1-209ENST00000397174 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
SCMH1-209ENST00000397174 FLGP20930 4061 aaPredicted RBP4.24□□□□□ -1.73
SCMH1-209ENST00000397174 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.75
SCMH1-209ENST00000397174 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
SCMH1-209ENST00000397174 KRTAP19-1Q8IUB9 90 aa4.1□□□□□ -1.75
SCMH1-209ENST00000397174 SPRR2GQ9BYE4 73 aa4.1□□□□□ -1.75
SCMH1-209ENST00000397174 KRTAP10-12P60413 245 aa4.09□□□□□ -1.75
SCMH1-209ENST00000397174 M0R2T5 61 aa4.08□□□□□ -1.76
SCMH1-209ENST00000397174 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
SCMH1-209ENST00000397174 KRTAP10-10P60014 251 aa4.03□□□□□ -1.76
SCMH1-209ENST00000397174 FSIP2Q5CZC0 6907 aa3.98□□□□□ -1.77
SCMH1-209ENST00000397174 MT1HP80294 61 aa3.96□□□□□ -1.78
SCMH1-209ENST00000397174 KRTAP9-6A0A140TA67 174 aa3.95□□□□□ -1.78
SCMH1-209ENST00000397174 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
SCMH1-209ENST00000397174 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
SCMH1-209ENST00000397174 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
SCMH1-209ENST00000397174 MT1FP04733 61 aa3.92□□□□□ -1.78
SCMH1-209ENST00000397174 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
SCMH1-209ENST00000397174 MT1XP80297 61 aa3.9□□□□□ -1.79
SCMH1-209ENST00000397174 MT2AP02795 61 aa3.89□□□□□ -1.79
SCMH1-209ENST00000397174 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
SCMH1-209ENST00000397174 KRTAP9-8Q9BYQ0 159 aa3.86□□□□□ -1.79
SCMH1-209ENST00000397174 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
SCMH1-209ENST00000397174 USH2AO75445 5202 aa3.84□□□□□ -1.8
SCMH1-209ENST00000397174 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
SCMH1-209ENST00000397174 MT1BP07438 61 aa3.82□□□□□ -1.8
SCMH1-209ENST00000397174 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
SCMH1-209ENST00000397174 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
SCMH1-209ENST00000397174 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
SCMH1-209ENST00000397174 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
SCMH1-209ENST00000397174 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
SCMH1-209ENST00000397174 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
SCMH1-209ENST00000397174 KMT2DO14686 5537 aa3.73□□□□□ -1.81
SCMH1-209ENST00000397174 KRTAP9-3Q9BYQ3 159 aa3.68□□□□□ -1.82
SCMH1-209ENST00000397174 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
SCMH1-209ENST00000397174 KRTAP9-2Q9BYQ4 174 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms