RNA–Protein interactions for RNA: ENST00000397171.6

SCMH1-208, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 5 BASIC

Gene SCMH1, Length 3,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-208ENST00000397171 DMBT1Q9UGM3 2413 aaPredicted RBP5.2□□□□□ -1.58
SCMH1-208ENST00000397171 NDUFAF8A1L188 74 aa5.2□□□□□ -1.58
SCMH1-208ENST00000397171 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
SCMH1-208ENST00000397171 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
SCMH1-208ENST00000397171 APOBP04114 4563 aaKnown RBP5.18□□□□□ -1.58
SCMH1-208ENST00000397171 C9orf92A6NGG3 77 aa5.18□□□□□ -1.58
SCMH1-208ENST00000397171 C20orf166-AS1Q96NR2 134 aa5.18□□□□□ -1.58
SCMH1-208ENST00000397171 C10orf95Q9H7T3 257 aa5.18□□□□□ -1.58
SCMH1-208ENST00000397171 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
SCMH1-208ENST00000397171 J3QL48 77 aa5.16□□□□□ -1.58
SCMH1-208ENST00000397171 BIRC6Q9NR09 4857 aa5.15□□□□□ -1.58
SCMH1-208ENST00000397171 LRP1Q07954 4544 aaKnown RBP5.15□□□□□ -1.59
SCMH1-208ENST00000397171 A0A0D9SG42 100 aa5.14□□□□□ -1.59
SCMH1-208ENST00000397171 KRTAP10-6P60371 365 aaPredicted RBP5.14□□□□□ -1.59
SCMH1-208ENST00000397171 RPS29P62273 56 aaKnown RBP5.12□□□□□ -1.59
SCMH1-208ENST00000397171 KRTAP10-4P60372 401 aaPredicted RBP5.1□□□□□ -1.59
SCMH1-208ENST00000397171 MYCBP2O75592 4640 aa5.1□□□□□ -1.59
SCMH1-208ENST00000397171 KRTAP17-1Q9BYP8 105 aa5.09□□□□□ -1.59
SCMH1-208ENST00000397171 PKHD1L1Q86WI1 4243 aa5.08□□□□□ -1.6
SCMH1-208ENST00000397171 KRTAP3-2Q9BYR7 98 aa5.08□□□□□ -1.6
SCMH1-208ENST00000397171 HSPG2P98160 4391 aa5.07□□□□□ -1.6
SCMH1-208ENST00000397171 KRTAP4-5Q9BYR2 181 aa5.07□□□□□ -1.6
SCMH1-208ENST00000397171 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
SCMH1-208ENST00000397171 RYR1P21817 5038 aa5.07□□□□□ -1.6
SCMH1-208ENST00000397171 Q5VSD8 79 aa5.04□□□□□ -1.6
SCMH1-208ENST00000397171 S4R3F8 94 aa5.04□□□□□ -1.6
SCMH1-208ENST00000397171 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
SCMH1-208ENST00000397171 HERC2O95714 4834 aa5.01□□□□□ -1.61
SCMH1-208ENST00000397171 ABCA13Q86UQ4 5058 aa4.98□□□□□ -1.61
SCMH1-208ENST00000397171 TNXBP22105 4242 aa4.97□□□□□ -1.61
SCMH1-208ENST00000397171 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
SCMH1-208ENST00000397171 FAT3Q8TDW7 4589 aa4.96□□□□□ -1.62
SCMH1-208ENST00000397171 XP32Q5T750 250 aa4.95□□□□□ -1.62
SCMH1-208ENST00000397171 KRTAP12-1P59990 96 aa4.95□□□□□ -1.62
SCMH1-208ENST00000397171 KRTAP10-8P60410 259 aa4.9□□□□□ -1.63
SCMH1-208ENST00000397171 LPAP08519 4548 aa4.85□□□□□ -1.63
SCMH1-208ENST00000397171 LRP2P98164 4655 aa4.84□□□□□ -1.64
SCMH1-208ENST00000397171 HERC1Q15751 4861 aa4.82□□□□□ -1.64
SCMH1-208ENST00000397171 LUZP6Q538Z0 58 aa4.81□□□□□ -1.64
SCMH1-208ENST00000397171 MT1HL1P0DM35 61 aa4.79□□□□□ -1.64
SCMH1-208ENST00000397171 M0QZ58 72 aa4.78□□□□□ -1.64
SCMH1-208ENST00000397171 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
SCMH1-208ENST00000397171 SEC61BP60468 96 aaKnown RBP4.67□□□□□ -1.66
SCMH1-208ENST00000397171 R4GN34 69 aa4.6□□□□□ -1.67
SCMH1-208ENST00000397171 MUC2Q02817 5179 aa4.59□□□□□ -1.67
SCMH1-208ENST00000397171 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
SCMH1-208ENST00000397171 UBR4Q5T4S7 5183 aa4.55□□□□□ -1.68
SCMH1-208ENST00000397171 LORP23490 312 aaPredicted RBP4.53□□□□□ -1.68
SCMH1-208ENST00000397171 PP632Q6XCG6 107 aa4.53□□□□□ -1.68
SCMH1-208ENST00000397171 KRTAP4-1Q9BYQ7 146 aa4.51□□□□□ -1.69
SCMH1-208ENST00000397171 RNF213Q63HN8 5207 aa4.48□□□□□ -1.69
SCMH1-208ENST00000397171 MUC17Q685J3 4493 aa4.48□□□□□ -1.69
SCMH1-208ENST00000397171 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
SCMH1-208ENST00000397171 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
SCMH1-208ENST00000397171 LCE2DQ5TA82 110 aaPredicted RBP4.37□□□□□ -1.71
SCMH1-208ENST00000397171 FAT4Q6V0I7 4981 aa4.36□□□□□ -1.71
SCMH1-208ENST00000397171 KRTAP19-2Q3LHN2 52 aa4.32□□□□□ -1.72
SCMH1-208ENST00000397171 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
SCMH1-208ENST00000397171 TNP1P09430 55 aa4.28□□□□□ -1.72
SCMH1-208ENST00000397171 FLGP20930 4061 aaPredicted RBP4.27□□□□□ -1.73
SCMH1-208ENST00000397171 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
SCMH1-208ENST00000397171 M0R2T5 61 aa4.12□□□□□ -1.75
SCMH1-208ENST00000397171 INE1O15225 51 aa4.12□□□□□ -1.75
SCMH1-208ENST00000397171 LCE2CQ5TA81 110 aa4.12□□□□□ -1.75
SCMH1-208ENST00000397171 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
SCMH1-208ENST00000397171 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
SCMH1-208ENST00000397171 MT1HP80294 61 aa4.03□□□□□ -1.76
SCMH1-208ENST00000397171 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
SCMH1-208ENST00000397171 KRTAP19-1Q8IUB9 90 aa3.98□□□□□ -1.77
SCMH1-208ENST00000397171 LCE2BO14633 110 aa3.98□□□□□ -1.77
SCMH1-208ENST00000397171 MT1FP04733 61 aa3.96□□□□□ -1.77
SCMH1-208ENST00000397171 MT2AP02795 61 aa3.94□□□□□ -1.78
SCMH1-208ENST00000397171 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
SCMH1-208ENST00000397171 FSIP2Q5CZC0 6907 aa3.93□□□□□ -1.78
SCMH1-208ENST00000397171 KRTAP8-1Q8IUC2 63 aa3.93□□□□□ -1.78
SCMH1-208ENST00000397171 KRTAP9-8Q9BYQ0 159 aa3.91□□□□□ -1.78
SCMH1-208ENST00000397171 KRTAP9-2Q9BYQ4 174 aa3.85□□□□□ -1.79
SCMH1-208ENST00000397171 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
SCMH1-208ENST00000397171 USH2AO75445 5202 aa3.84□□□□□ -1.8
SCMH1-208ENST00000397171 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
SCMH1-208ENST00000397171 MT1BP07438 61 aa3.79□□□□□ -1.8
SCMH1-208ENST00000397171 KRTAP19-8Q3LI54 63 aa3.75□□□□□ -1.81
SCMH1-208ENST00000397171 KRTAP10-5P60370 271 aa3.74□□□□□ -1.81
SCMH1-208ENST00000397171 MT1XP80297 61 aa3.74□□□□□ -1.81
SCMH1-208ENST00000397171 KRTAP9-3Q9BYQ3 159 aa3.74□□□□□ -1.81
SCMH1-208ENST00000397171 KMT2DO14686 5537 aa3.71□□□□□ -1.81
SCMH1-208ENST00000397171 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
SCMH1-208ENST00000397171 CRCT1Q9UGL9 99 aa3.65□□□□□ -1.82
SCMH1-208ENST00000397171 KRTAP9-6A0A140TA67 174 aa3.64□□□□□ -1.83
SCMH1-208ENST00000397171 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
SCMH1-208ENST00000397171 SSPOA2VEC9 5147 aa3.62□□□□□ -1.83
SCMH1-208ENST00000397171 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
SCMH1-208ENST00000397171 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
SCMH1-208ENST00000397171 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
SCMH1-208ENST00000397171 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
SCMH1-208ENST00000397171 KRTAP4-8Q9BYQ9 185 aa3.53□□□□□ -1.84
SCMH1-208ENST00000397171 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
SCMH1-208ENST00000397171 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
SCMH1-208ENST00000397171 FCGBPQ9Y6R7 5405 aaPredicted RBP3.51□□□□□ -1.85
SCMH1-208ENST00000397171 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms