RNA–Protein interactions for RNA: ENST00000396617.7

MKL1-202, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best) BASIC

Gene MKL1, Length 4,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-202ENST00000396617 STARD9Q9P2P6 4700 aa6.86□□□□□ -1.31
MKL1-202ENST00000396617 KRTAP3-3Q9BYR6 98 aa6.82□□□□□ -1.32
MKL1-202ENST00000396617 KRTAP10-10P60014 251 aa6.8□□□□□ -1.32
MKL1-202ENST00000396617 KRTAP3-2Q9BYR7 98 aa6.77□□□□□ -1.33
MKL1-202ENST00000396617 PRKDCP78527 4128 aaKnown RBP6.75□□□□□ -1.33
MKL1-202ENST00000396617 ANK2Q01484 3957 aa6.74□□□□□ -1.33
MKL1-202ENST00000396617 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
MKL1-202ENST00000396617 DNAH3Q8TD57 4116 aa6.71□□□□□ -1.33
MKL1-202ENST00000396617 DNAH2Q9P225 4427 aa6.69□□□□□ -1.34
MKL1-202ENST00000396617 DYNC1H1Q14204 4646 aaKnown RBP6.67□□□□□ -1.34
MKL1-202ENST00000396617 LRP1BQ9NZR2 4599 aa6.65□□□□□ -1.34
MKL1-202ENST00000396617 DNAH8Q96JB1 4490 aa6.64□□□□□ -1.35
MKL1-202ENST00000396617 FAT1Q14517 4588 aa6.63□□□□□ -1.35
MKL1-202ENST00000396617 KMT2AQ03164 3969 aa6.6□□□□□ -1.35
MKL1-202ENST00000396617 CMYA5Q8N3K9 4069 aa6.59□□□□□ -1.35
MKL1-202ENST00000396617 DYNC2H1Q8NCM8 4307 aaKnown RBP6.57□□□□□ -1.36
MKL1-202ENST00000396617 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
MKL1-202ENST00000396617 SACSQ9NZJ4 4579 aa6.46□□□□□ -1.38
MKL1-202ENST00000396617 FAT2Q9NYQ8 4349 aa6.45□□□□□ -1.38
MKL1-202ENST00000396617 LYSTQ99698 3801 aa6.44□□□□□ -1.38
MKL1-202ENST00000396617 VPS13BQ7Z7G8 4022 aa6.41□□□□□ -1.38
MKL1-202ENST00000396617 HECTD4Q9Y4D8 3996 aa6.37□□□□□ -1.39
MKL1-202ENST00000396617 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
MKL1-202ENST00000396617 DNAH7Q8WXX0 4024 aa6.37□□□□□ -1.39
MKL1-202ENST00000396617 RYR1P21817 5038 aa6.36□□□□□ -1.39
MKL1-202ENST00000396617 LORP23490 312 aaPredicted RBP6.34□□□□□ -1.39
MKL1-202ENST00000396617 DNAH6Q9C0G6 4158 aa6.32□□□□□ -1.4
MKL1-202ENST00000396617 KIAA1109Q2LD37 5005 aa6.32□□□□□ -1.4
MKL1-202ENST00000396617 FRAS1Q86XX4 4008 aa6.31□□□□□ -1.4
MKL1-202ENST00000396617 KRTAP4-1Q9BYQ7 146 aa6.29□□□□□ -1.4
MKL1-202ENST00000396617 APOBP04114 4563 aaKnown RBP6.25□□□□□ -1.41
MKL1-202ENST00000396617 MYCBP2O75592 4640 aa6.23□□□□□ -1.41
MKL1-202ENST00000396617 RYR3Q15413 4870 aa6.21□□□□□ -1.42
MKL1-202ENST00000396617 KRTAP17-1Q9BYP8 105 aa6.2□□□□□ -1.42
MKL1-202ENST00000396617 HYDINQ4G0P3 5121 aa6.2□□□□□ -1.42
MKL1-202ENST00000396617 LRP1Q07954 4544 aaKnown RBP6.19□□□□□ -1.42
MKL1-202ENST00000396617 RYR2Q92736 4967 aa6.14□□□□□ -1.43
MKL1-202ENST00000396617 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
MKL1-202ENST00000396617 PKHD1P08F94 4074 aa6.07□□□□□ -1.44
MKL1-202ENST00000396617 FAT3Q8TDW7 4589 aa6.04□□□□□ -1.44
MKL1-202ENST00000396617 KRTAP10-12P60413 245 aa6.04□□□□□ -1.44
MKL1-202ENST00000396617 PKD1P98161 4303 aa5.99□□□□□ -1.45
MKL1-202ENST00000396617 MT1HP80294 61 aa5.96□□□□□ -1.46
MKL1-202ENST00000396617 LCE3AQ5TA76 89 aa5.95□□□□□ -1.46
MKL1-202ENST00000396617 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
MKL1-202ENST00000396617 HSPG2P98160 4391 aa5.91□□□□□ -1.46
MKL1-202ENST00000396617 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
MKL1-202ENST00000396617 LRP2P98164 4655 aa5.89□□□□□ -1.47
MKL1-202ENST00000396617 MT2AP02795 61 aa5.89□□□□□ -1.47
MKL1-202ENST00000396617 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
MKL1-202ENST00000396617 HERC2O95714 4834 aa5.86□□□□□ -1.47
MKL1-202ENST00000396617 MT1FP04733 61 aa5.81□□□□□ -1.48
MKL1-202ENST00000396617 INE1O15225 51 aa5.73□□□□□ -1.49
MKL1-202ENST00000396617 PKHD1L1Q86WI1 4243 aa5.69□□□□□ -1.5
MKL1-202ENST00000396617 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
MKL1-202ENST00000396617 BIRC6Q9NR09 4857 aa5.68□□□□□ -1.5
MKL1-202ENST00000396617 TNXBP22105 4242 aa5.65□□□□□ -1.51
MKL1-202ENST00000396617 LPAP08519 4548 aa5.63□□□□□ -1.51
MKL1-202ENST00000396617 LCE2CQ5TA81 110 aa5.58□□□□□ -1.52
MKL1-202ENST00000396617 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
MKL1-202ENST00000396617 EPPK1P58107 5090 aaKnown RBP5.55□□□□□ -1.52
MKL1-202ENST00000396617 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
MKL1-202ENST00000396617 KRTAP19-2Q3LHN2 52 aa5.55□□□□□ -1.52
MKL1-202ENST00000396617 HERC1Q15751 4861 aa5.55□□□□□ -1.52
MKL1-202ENST00000396617 KRTAP9-8Q9BYQ0 159 aa5.51□□□□□ -1.53
MKL1-202ENST00000396617 ABCA13Q86UQ4 5058 aa5.49□□□□□ -1.53
MKL1-202ENST00000396617 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.54
MKL1-202ENST00000396617 PCLOQ9Y6V0 5065 aa5.45□□□□□ -1.54
MKL1-202ENST00000396617 MT1BP07438 61 aa5.43□□□□□ -1.54
MKL1-202ENST00000396617 MUC17Q685J3 4493 aa5.41□□□□□ -1.54
MKL1-202ENST00000396617 MT1XP80297 61 aa5.41□□□□□ -1.54
MKL1-202ENST00000396617 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.54
MKL1-202ENST00000396617 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
MKL1-202ENST00000396617 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
MKL1-202ENST00000396617 FLGP20930 4061 aaPredicted RBP5.34□□□□□ -1.55
MKL1-202ENST00000396617 KRTAP9-3Q9BYQ3 159 aa5.33□□□□□ -1.56
MKL1-202ENST00000396617 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
MKL1-202ENST00000396617 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
MKL1-202ENST00000396617 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
MKL1-202ENST00000396617 RNF213Q63HN8 5207 aa5.12□□□□□ -1.59
MKL1-202ENST00000396617 LCE2BO14633 110 aa5.11□□□□□ -1.59
MKL1-202ENST00000396617 KRTAP4-8A0A0G2JLE6 195 aa5.1□□□□□ -1.59
MKL1-202ENST00000396617 KRTAP4-8Q9BYQ9 185 aa5.1□□□□□ -1.59
MKL1-202ENST00000396617 FAT4Q6V0I7 4981 aa5.1□□□□□ -1.59
MKL1-202ENST00000396617 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
MKL1-202ENST00000396617 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
MKL1-202ENST00000396617 MUC2Q02817 5179 aa5.02□□□□□ -1.61
MKL1-202ENST00000396617 UBR4Q5T4S7 5183 aa4.96□□□□□ -1.62
MKL1-202ENST00000396617 LCE2AQ5TA79 106 aaPredicted RBP4.89□□□□□ -1.63
MKL1-202ENST00000396617 FSIP2Q5CZC0 6907 aa4.88□□□□□ -1.63
MKL1-202ENST00000396617 MT1GP13640 62 aa4.85□□□□□ -1.63
MKL1-202ENST00000396617 MT1LQ93083 61 aa4.82□□□□□ -1.64
MKL1-202ENST00000396617 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
MKL1-202ENST00000396617 MT1EP04732 61 aa4.81□□□□□ -1.64
MKL1-202ENST00000396617 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
MKL1-202ENST00000396617 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
MKL1-202ENST00000396617 SPRR2EP22531 72 aa4.78□□□□□ -1.64
MKL1-202ENST00000396617 SPRR2BP35325 72 aa4.78□□□□□ -1.64
MKL1-202ENST00000396617 SPRR2AP35326 72 aa4.78□□□□□ -1.64
MKL1-202ENST00000396617 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms