RNA–Protein interactions for RNA: ENST00000396076.5

LDHB-203, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LDHB, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-203ENST00000396076 RPS28P62857 69 aaKnown RBP11.52□□□□□ -0.57
LDHB-203ENST00000396076 LCA10Q71F78 164 aa11.52□□□□□ -0.57
LDHB-203ENST00000396076 KRTAP3-3Q9BYR6 98 aa11.47□□□□□ -0.57
LDHB-203ENST00000396076 FLGP20930 4061 aaPredicted RBP11.44□□□□□ -0.58
LDHB-203ENST00000396076 SPTSSBQ8NFR3 76 aa11.4□□□□□ -0.58
LDHB-203ENST00000396076 FAT4Q6V0I7 4981 aa11.39□□□□□ -0.59
LDHB-203ENST00000396076 CSAG1Q6PB30 78 aa11.34□□□□□ -0.59
LDHB-203ENST00000396076 MT1HP80294 61 aa11.32□□□□□ -0.6
LDHB-203ENST00000396076 SMIM26A0A096LP01 95 aa11.3□□□□□ -0.6
LDHB-203ENST00000396076 M0R2T5 61 aa11.19□□□□□ -0.62
LDHB-203ENST00000396076 LINC01558Q9Y6Z2 57 aa11.14□□□□□ -0.63
LDHB-203ENST00000396076 Q1T7F1 81 aa11.14□□□□□ -0.63
LDHB-203ENST00000396076 V9GYY9 64 aa11.11□□□□□ -0.63
LDHB-203ENST00000396076 H0YAA0 97 aa11.06□□□□□ -0.64
LDHB-203ENST00000396076 A0A1B0GU69 56 aa11.04□□□□□ -0.64
LDHB-203ENST00000396076 SEC61GP60059 68 aa11.04□□□□□ -0.64
LDHB-203ENST00000396076 LCE2AQ5TA79 106 aaPredicted RBP11.04□□□□□ -0.64
LDHB-203ENST00000396076 ADM2Q7Z4H4 148 aa11.02□□□□□ -0.65
LDHB-203ENST00000396076 KRTAP3-2Q9BYR7 98 aa11.01□□□□□ -0.65
LDHB-203ENST00000396076 PRR15LQ9BU68 103 aa10.99□□□□□ -0.65
LDHB-203ENST00000396076 KRTAP10-6P60371 365 aaPredicted RBP10.97□□□□□ -0.65
LDHB-203ENST00000396076 PSPHP1O15172 72 aa10.95□□□□□ -0.66
LDHB-203ENST00000396076 P0C880 135 aa10.93□□□□□ -0.66
LDHB-203ENST00000396076 LORP23490 312 aaPredicted RBP10.88□□□□□ -0.67
LDHB-203ENST00000396076 KRTAP9-8Q9BYQ0 159 aa10.88□□□□□ -0.67
LDHB-203ENST00000396076 Q5VV11 94 aa10.85□□□□□ -0.67
LDHB-203ENST00000396076 MT2AP02795 61 aa10.82□□□□□ -0.68
LDHB-203ENST00000396076 A0A1B0GU33 70 aa10.79□□□□□ -0.68
LDHB-203ENST00000396076 MT1FP04733 61 aa10.75□□□□□ -0.69
LDHB-203ENST00000396076 KRTAP10-10P60014 251 aa10.73□□□□□ -0.69
LDHB-203ENST00000396076 UQCR11O14957 56 aa10.67□□□□□ -0.7
LDHB-203ENST00000396076 CRIPTQ9P021 101 aa10.67□□□□□ -0.7
LDHB-203ENST00000396076 M0QZ58 72 aa10.63□□□□□ -0.71
LDHB-203ENST00000396076 KRTAP13-4Q3LI77 160 aa10.63□□□□□ -0.71
LDHB-203ENST00000396076 R4GN34 69 aa10.63□□□□□ -0.71
LDHB-203ENST00000396076 A6NED7 52 aa10.61□□□□□ -0.71
LDHB-203ENST00000396076 SPATA8Q6RVD6 105 aa10.61□□□□□ -0.71
LDHB-203ENST00000396076 MIR22HGQ0VDD5 57 aa10.53□□□□□ -0.72
LDHB-203ENST00000396076 SPRR2GQ9BYE4 73 aa10.5□□□□□ -0.73
LDHB-203ENST00000396076 KRTAP9-3Q9BYQ3 159 aa10.5□□□□□ -0.73
LDHB-203ENST00000396076 KRTAP19-1Q8IUB9 90 aa10.48□□□□□ -0.73
LDHB-203ENST00000396076 A8MU10 97 aa10.43□□□□□ -0.74
LDHB-203ENST00000396076 LINC01554Q52M75 96 aa10.43□□□□□ -0.74
LDHB-203ENST00000396076 A0A0D9SG42 100 aa10.41□□□□□ -0.74
LDHB-203ENST00000396076 CDC42SE1Q9NRR8 79 aa10.39□□□□□ -0.75
LDHB-203ENST00000396076 BRK1Q8WUW1 75 aa10.32□□□□□ -0.76
LDHB-203ENST00000396076 KRTAP19-8Q3LI54 63 aa10.26□□□□□ -0.77
LDHB-203ENST00000396076 A6NN06 94 aa10.24□□□□□ -0.77
LDHB-203ENST00000396076 LCE2BO14633 110 aa10.23□□□□□ -0.77
LDHB-203ENST00000396076 KRTAP12-1P59990 96 aa10.22□□□□□ -0.77
LDHB-203ENST00000396076 SPINT4Q6UDR6 99 aa10.18□□□□□ -0.78
LDHB-203ENST00000396076 KRTAP12-2P59991 146 aa10.17□□□□□ -0.78
LDHB-203ENST00000396076 MT1BP07438 61 aa10.13□□□□□ -0.79
LDHB-203ENST00000396076 LCE2DQ5TA82 110 aaPredicted RBP10.12□□□□□ -0.79
LDHB-203ENST00000396076 PLAC4Q8WY50 150 aa10.1□□□□□ -0.79
LDHB-203ENST00000396076 K7ERS5 55 aa10.09□□□□□ -0.79
LDHB-203ENST00000396076 USH2AO75445 5202 aa10.01□□□□□ -0.81
LDHB-203ENST00000396076 PRO0628Q9UI54 55 aa9.97□□□□□ -0.81
LDHB-203ENST00000396076 CAMK2N1Q7Z7J9 78 aa9.94□□□□□ -0.82
LDHB-203ENST00000396076 KRTAP9-2Q9BYQ4 174 aa9.82□□□□□ -0.84
LDHB-203ENST00000396076 PMAIP1Q13794 54 aa9.77□□□□□ -0.85
LDHB-203ENST00000396076 MT1XP80297 61 aa9.76□□□□□ -0.85
LDHB-203ENST00000396076 KRTAP10-5P60370 271 aa9.73□□□□□ -0.85
LDHB-203ENST00000396076 SSPOA2VEC9 5147 aa9.7□□□□□ -0.86
LDHB-203ENST00000396076 C10orf95Q9H7T3 257 aa9.69□□□□□ -0.86
LDHB-203ENST00000396076 PRO2289Q9P1D8 64 aa9.67□□□□□ -0.86
LDHB-203ENST00000396076 KRTAP19-6Q3LI70 58 aa9.66□□□□□ -0.86
LDHB-203ENST00000396076 ROMO1P60602 79 aa9.64□□□□□ -0.87
LDHB-203ENST00000396076 FSIP2Q5CZC0 6907 aa9.63□□□□□ -0.87
LDHB-203ENST00000396076 CRCT1Q9UGL9 99 aa9.46□□□□□ -0.9
LDHB-203ENST00000396076 TNP1P09430 55 aa9.42□□□□□ -0.9
LDHB-203ENST00000396076 KRTAP25-1Q3LHN0 102 aa9.39□□□□□ -0.91
LDHB-203ENST00000396076 KRTAP10-7P60409 375 aaPredicted RBP9.35□□□□□ -0.91
LDHB-203ENST00000396076 FCGBPQ9Y6R7 5405 aaPredicted RBP9.34□□□□□ -0.91
LDHB-203ENST00000396076 KTN1-AS1Q86SY8 53 aa9.26□□□□□ -0.93
LDHB-203ENST00000396076 KRTAP10-12P60413 245 aa9.26□□□□□ -0.93
LDHB-203ENST00000396076 PRAC1Q96KF2 57 aa9.16□□□□□ -0.94
LDHB-203ENST00000396076 KRTAP9-6A0A140TA67 174 aa9.14□□□□□ -0.95
LDHB-203ENST00000396076 KRTAP23-1A1A580 65 aa9.08□□□□□ -0.96
LDHB-203ENST00000396076 LCE3AQ5TA76 89 aa9.07□□□□□ -0.96
LDHB-203ENST00000396076 KRTAP4-8A0A0G2JLE6 195 aa9.05□□□□□ -0.96
LDHB-203ENST00000396076 KRTAP4-8Q9BYQ9 185 aa9.05□□□□□ -0.96
LDHB-203ENST00000396076 PP632Q6XCG6 107 aa9.01□□□□□ -0.97
LDHB-203ENST00000396076 KMT2DO14686 5537 aa8.99□□□□□ -0.97
LDHB-203ENST00000396076 KRTAP8-1Q8IUC2 63 aa8.88□□□□□ -0.99
LDHB-203ENST00000396076 MACF1Q9UPN3 7388 aaKnown RBP8.85□□□□□ -0.99
LDHB-203ENST00000396076 KRTAP19-5Q3LI72 72 aa8.77□□□□□ -1.01
LDHB-203ENST00000396076 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.75□□□□□ -1.01
LDHB-203ENST00000396076 SVIPQ8NHG7 77 aa8.74□□□□□ -1.01
LDHB-203ENST00000396076 KRTAP12-3P60328 96 aa8.72□□□□□ -1.01
LDHB-203ENST00000396076 KRTAP19-7Q3SYF9 63 aa8.7□□□□□ -1.02
LDHB-203ENST00000396076 SYNE2Q8WXH0 6885 aaKnown RBP8.61□□□□□ -1.03
LDHB-203ENST00000396076 MT1EP04732 61 aa8.57□□□□□ -1.04
LDHB-203ENST00000396076 SPRR2FQ96RM1 72 aa8.55□□□□□ -1.04
LDHB-203ENST00000396076 KRTAP5-9P26371 169 aa8.54□□□□□ -1.04
LDHB-203ENST00000396076 KRTAP6-3Q3LI67 103 aa8.5□□□□□ -1.05
LDHB-203ENST00000396076 KRTAP15-1Q3LI76 137 aa8.49□□□□□ -1.05
LDHB-203ENST00000396076 MUC12Q9UKN1 5478 aa8.38□□□□□ -1.07
LDHB-203ENST00000396076 MT1LQ93083 61 aa8.36□□□□□ -1.07
LDHB-203ENST00000396076 KRTAP9-7A8MTY7 169 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms