RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 LINC01554Q52M75 96 aa6.42□□□□□ -1.38
ITGB1-202ENST00000396033 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
ITGB1-202ENST00000396033 H3BS24 57 aa6.37□□□□□ -1.39
ITGB1-202ENST00000396033 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
ITGB1-202ENST00000396033 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
ITGB1-202ENST00000396033 ABCA13Q86UQ4 5058 aa6.35□□□□□ -1.39
ITGB1-202ENST00000396033 TPRXLQ17RH7 258 aa6.33□□□□□ -1.4
ITGB1-202ENST00000396033 COX6B2Q6YFQ2 88 aa6.33□□□□□ -1.4
ITGB1-202ENST00000396033 A0A1B0GU69 56 aa6.32□□□□□ -1.4
ITGB1-202ENST00000396033 BIRC6Q9NR09 4857 aa6.31□□□□□ -1.4
ITGB1-202ENST00000396033 MIR22HGQ0VDD5 57 aa6.3□□□□□ -1.4
ITGB1-202ENST00000396033 HERC2O95714 4834 aa6.29□□□□□ -1.4
ITGB1-202ENST00000396033 J3QL48 77 aa6.29□□□□□ -1.4
ITGB1-202ENST00000396033 LRP2P98164 4655 aa6.26□□□□□ -1.41
ITGB1-202ENST00000396033 LPAP08519 4548 aa6.25□□□□□ -1.41
ITGB1-202ENST00000396033 UQCR11O14957 56 aa6.23□□□□□ -1.41
ITGB1-202ENST00000396033 H0YAA0 97 aa6.21□□□□□ -1.41
ITGB1-202ENST00000396033 S4R3F8 94 aa6.14□□□□□ -1.43
ITGB1-202ENST00000396033 SEC61BP60468 96 aaKnown RBP6.12□□□□□ -1.43
ITGB1-202ENST00000396033 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
ITGB1-202ENST00000396033 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
ITGB1-202ENST00000396033 P0C880 135 aa6.1□□□□□ -1.43
ITGB1-202ENST00000396033 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.44
ITGB1-202ENST00000396033 CRIPTQ9P021 101 aa6.08□□□□□ -1.44
ITGB1-202ENST00000396033 ROMO1P60602 79 aa6.08□□□□□ -1.44
ITGB1-202ENST00000396033 A0A1B0GU33 70 aa6.04□□□□□ -1.44
ITGB1-202ENST00000396033 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
ITGB1-202ENST00000396033 PCLOQ9Y6V0 5065 aa6.01□□□□□ -1.45
ITGB1-202ENST00000396033 KRTAP4-1Q9BYQ7 146 aa5.99□□□□□ -1.45
ITGB1-202ENST00000396033 HERC1Q15751 4861 aa5.97□□□□□ -1.45
ITGB1-202ENST00000396033 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.45
ITGB1-202ENST00000396033 KRTAP3-2Q9BYR7 98 aa5.95□□□□□ -1.46
ITGB1-202ENST00000396033 HMCN2Q8NDA2 5059 aa5.93□□□□□ -1.46
ITGB1-202ENST00000396033 KRTAP13-4Q3LI77 160 aa5.89□□□□□ -1.47
ITGB1-202ENST00000396033 KRTAP19-2Q3LHN2 52 aa5.83□□□□□ -1.48
ITGB1-202ENST00000396033 MUC2Q02817 5179 aa5.82□□□□□ -1.48
ITGB1-202ENST00000396033 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
ITGB1-202ENST00000396033 A0A0D9SG42 100 aa5.81□□□□□ -1.48
ITGB1-202ENST00000396033 K7ERS5 55 aa5.79□□□□□ -1.48
ITGB1-202ENST00000396033 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
ITGB1-202ENST00000396033 FLGP20930 4061 aaPredicted RBP5.74□□□□□ -1.49
ITGB1-202ENST00000396033 M0QZ58 72 aa5.73□□□□□ -1.49
ITGB1-202ENST00000396033 R4GN34 69 aa5.68□□□□□ -1.5
ITGB1-202ENST00000396033 NDUFAF8A1L188 74 aa5.67□□□□□ -1.5
ITGB1-202ENST00000396033 KRTAP12-2P59991 146 aa5.66□□□□□ -1.5
ITGB1-202ENST00000396033 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
ITGB1-202ENST00000396033 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
ITGB1-202ENST00000396033 RNF213Q63HN8 5207 aa5.64□□□□□ -1.51
ITGB1-202ENST00000396033 LORP23490 312 aaPredicted RBP5.64□□□□□ -1.51
ITGB1-202ENST00000396033 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
ITGB1-202ENST00000396033 LCE2CQ5TA81 110 aa5.61□□□□□ -1.51
ITGB1-202ENST00000396033 FAT4Q6V0I7 4981 aa5.58□□□□□ -1.52
ITGB1-202ENST00000396033 M0R2T5 61 aa5.52□□□□□ -1.53
ITGB1-202ENST00000396033 MT1HP80294 61 aa5.51□□□□□ -1.53
ITGB1-202ENST00000396033 CAMK2N1Q7Z7J9 78 aa5.36□□□□□ -1.55
ITGB1-202ENST00000396033 MT2AP02795 61 aa5.34□□□□□ -1.55
ITGB1-202ENST00000396033 KRTAP10-10P60014 251 aa5.33□□□□□ -1.56
ITGB1-202ENST00000396033 MT1FP04733 61 aa5.33□□□□□ -1.56
ITGB1-202ENST00000396033 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
ITGB1-202ENST00000396033 KRTAP9-8Q9BYQ0 159 aa5.32□□□□□ -1.56
ITGB1-202ENST00000396033 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
ITGB1-202ENST00000396033 PLAC4Q8WY50 150 aa5.24□□□□□ -1.57
ITGB1-202ENST00000396033 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
ITGB1-202ENST00000396033 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
ITGB1-202ENST00000396033 KRTAP9-3Q9BYQ3 159 aa5.11□□□□□ -1.59
ITGB1-202ENST00000396033 TNP1P09430 55 aa5.11□□□□□ -1.59
ITGB1-202ENST00000396033 LCE2AQ5TA79 106 aaPredicted RBP5.09□□□□□ -1.59
ITGB1-202ENST00000396033 MT1BP07438 61 aa5.08□□□□□ -1.6
ITGB1-202ENST00000396033 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
ITGB1-202ENST00000396033 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
ITGB1-202ENST00000396033 MT1XP80297 61 aa4.97□□□□□ -1.61
ITGB1-202ENST00000396033 KRTAP10-5P60370 271 aa4.97□□□□□ -1.61
ITGB1-202ENST00000396033 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
ITGB1-202ENST00000396033 LCE2BO14633 110 aa4.95□□□□□ -1.62
ITGB1-202ENST00000396033 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
ITGB1-202ENST00000396033 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
ITGB1-202ENST00000396033 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
ITGB1-202ENST00000396033 USH2AO75445 5202 aa4.83□□□□□ -1.64
ITGB1-202ENST00000396033 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
ITGB1-202ENST00000396033 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
ITGB1-202ENST00000396033 KRTAP8-1Q8IUC2 63 aa4.74□□□□□ -1.65
ITGB1-202ENST00000396033 KRTAP12-3P60328 96 aa4.65□□□□□ -1.66
ITGB1-202ENST00000396033 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
ITGB1-202ENST00000396033 KMT2DO14686 5537 aa4.59□□□□□ -1.67
ITGB1-202ENST00000396033 KRTAP4-8A0A0G2JLE6 195 aa4.56□□□□□ -1.68
ITGB1-202ENST00000396033 KRTAP19-6Q3LI70 58 aa4.56□□□□□ -1.68
ITGB1-202ENST00000396033 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
ITGB1-202ENST00000396033 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
ITGB1-202ENST00000396033 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
ITGB1-202ENST00000396033 LCE2DQ5TA82 110 aaPredicted RBP4.52□□□□□ -1.69
ITGB1-202ENST00000396033 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
ITGB1-202ENST00000396033 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-202ENST00000396033 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
ITGB1-202ENST00000396033 MT1EP04732 61 aa4.34□□□□□ -1.72
ITGB1-202ENST00000396033 INE1O15225 51 aa4.31□□□□□ -1.72
ITGB1-202ENST00000396033 MT1LQ93083 61 aa4.29□□□□□ -1.72
ITGB1-202ENST00000396033 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
ITGB1-202ENST00000396033 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
ITGB1-202ENST00000396033 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
ITGB1-202ENST00000396033 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms