RNA–Protein interactions for RNA: ENST00000395792.6

AFP-202, Transcript of alpha fetoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFP, Length 2,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-202ENST00000395792 LINC01558Q9Y6Z2 57 aa3.52□□□□□ -1.85
AFP-202ENST00000395792 SMR3BP02814 79 aaPredicted RBP3.51□□□□□ -1.85
AFP-202ENST00000395792 Q5W150 140 aa3.51□□□□□ -1.85
AFP-202ENST00000395792 WFDC13Q8IUB5 93 aa3.51□□□□□ -1.85
AFP-202ENST00000395792 SRRM2Q9UQ35 2752 aaKnown RBP3.5□□□□□ -1.85
AFP-202ENST00000395792 LINC00208Q96KT6 92 aa3.49□□□□□ -1.85
AFP-202ENST00000395792 ZCCHC13Q8WW36 166 aaKnown RBP3.49□□□□□ -1.85
AFP-202ENST00000395792 KMT2CQ8NEZ4 4911 aaKnown RBP3.48□□□□□ -1.85
AFP-202ENST00000395792 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
AFP-202ENST00000395792 Q5VSD8 79 aa3.48□□□□□ -1.85
AFP-202ENST00000395792 KRTAP17-1Q9BYP8 105 aa3.48□□□□□ -1.85
AFP-202ENST00000395792 H0Y9P7 68 aa3.47□□□□□ -1.85
AFP-202ENST00000395792 KRTAP3-1Q9BYR8 98 aa3.47□□□□□ -1.85
AFP-202ENST00000395792 SPINK7P58062 85 aa3.46□□□□□ -1.86
AFP-202ENST00000395792 KRTAP10-8P60410 259 aa3.46□□□□□ -1.86
AFP-202ENST00000395792 HSPG2P98160 4391 aa3.44□□□□□ -1.86
AFP-202ENST00000395792 UQCR11O14957 56 aa3.44□□□□□ -1.86
AFP-202ENST00000395792 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
AFP-202ENST00000395792 FAT1Q14517 4588 aa3.42□□□□□ -1.86
AFP-202ENST00000395792 RYR1P21817 5038 aa3.42□□□□□ -1.86
AFP-202ENST00000395792 RYR3Q15413 4870 aa3.42□□□□□ -1.86
AFP-202ENST00000395792 KRTAP15-1Q3LI76 137 aa3.42□□□□□ -1.86
AFP-202ENST00000395792 KRTAP13-3Q3SY46 172 aa3.42□□□□□ -1.86
AFP-202ENST00000395792 SPINT4Q6UDR6 99 aa3.4□□□□□ -1.87
AFP-202ENST00000395792 TNXBP22105 4242 aa3.4□□□□□ -1.87
AFP-202ENST00000395792 SPATA8Q6RVD6 105 aa3.39□□□□□ -1.87
AFP-202ENST00000395792 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
AFP-202ENST00000395792 FAT3Q8TDW7 4589 aa3.39□□□□□ -1.87
AFP-202ENST00000395792 IGKV2-30P06310 120 aa3.37□□□□□ -1.87
AFP-202ENST00000395792 PRO2289Q9P1D8 64 aa3.37□□□□□ -1.87
AFP-202ENST00000395792 KRTAP9-8Q9BYQ0 159 aa3.36□□□□□ -1.87
AFP-202ENST00000395792 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
AFP-202ENST00000395792 R4GN34 69 aa3.35□□□□□ -1.87
AFP-202ENST00000395792 MT1HL1P0DM35 61 aa3.34□□□□□ -1.87
AFP-202ENST00000395792 COA5Q86WW8 74 aa3.33□□□□□ -1.88
AFP-202ENST00000395792 ACYP2P14621 99 aa3.32□□□□□ -1.88
AFP-202ENST00000395792 PCOTHQ58A44 107 aa3.31□□□□□ -1.88
AFP-202ENST00000395792 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
AFP-202ENST00000395792 C9orf92A6NGG3 77 aa3.3□□□□□ -1.88
AFP-202ENST00000395792 HRES1P13985 223 aa3.3□□□□□ -1.88
AFP-202ENST00000395792 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
AFP-202ENST00000395792 TPRXLQ17RH7 258 aa3.3□□□□□ -1.88
AFP-202ENST00000395792 KRTAP4-5Q9BYR2 181 aa3.3□□□□□ -1.88
AFP-202ENST00000395792 IGKV2D-30A0A075B6S6 120 aa3.28□□□□□ -1.88
AFP-202ENST00000395792 EPPK1P58107 5090 aaKnown RBP3.27□□□□□ -1.89
AFP-202ENST00000395792 LRP1Q07954 4544 aaKnown RBP3.27□□□□□ -1.89
AFP-202ENST00000395792 A0A1B0GU69 56 aa3.27□□□□□ -1.89
AFP-202ENST00000395792 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
AFP-202ENST00000395792 KIAA1109Q2LD37 5005 aa3.26□□□□□ -1.89
AFP-202ENST00000395792 BIRC6Q9NR09 4857 aa3.24□□□□□ -1.89
AFP-202ENST00000395792 HERC2O95714 4834 aa3.22□□□□□ -1.89
AFP-202ENST00000395792 COX6B2Q6YFQ2 88 aa3.21□□□□□ -1.89
AFP-202ENST00000395792 MYCBP2O75592 4640 aa3.21□□□□□ -1.9
AFP-202ENST00000395792 MUC17Q685J3 4493 aa3.17□□□□□ -1.9
AFP-202ENST00000395792 DMBT1Q9UGM3 2413 aaPredicted RBP3.17□□□□□ -1.9
AFP-202ENST00000395792 ABCA13Q86UQ4 5058 aa3.13□□□□□ -1.91
AFP-202ENST00000395792 H1FX-AS1Q4G0G2 97 aa3.12□□□□□ -1.91
AFP-202ENST00000395792 S4R3F8 94 aa3.1□□□□□ -1.91
AFP-202ENST00000395792 INE1O15225 51 aa3.09□□□□□ -1.91
AFP-202ENST00000395792 LRP2P98164 4655 aa3.04□□□□□ -1.92
AFP-202ENST00000395792 H0YAA0 97 aa3.03□□□□□ -1.92
AFP-202ENST00000395792 LPAP08519 4548 aa3.03□□□□□ -1.92
AFP-202ENST00000395792 PLAC4Q8WY50 150 aa3.01□□□□□ -1.93
AFP-202ENST00000395792 PCLOQ9Y6V0 5065 aa3.01□□□□□ -1.93
AFP-202ENST00000395792 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
AFP-202ENST00000395792 LCE5AQ5TCM9 118 aa2.98□□□□□ -1.93
AFP-202ENST00000395792 KRTAP4-1Q9BYQ7 146 aa2.98□□□□□ -1.93
AFP-202ENST00000395792 HERC1Q15751 4861 aa2.98□□□□□ -1.93
AFP-202ENST00000395792 HMCN2Q8NDA2 5059 aa2.97□□□□□ -1.93
AFP-202ENST00000395792 KRTAP19-2Q3LHN2 52 aa2.97□□□□□ -1.93
AFP-202ENST00000395792 CRIPTQ9P021 101 aa2.96□□□□□ -1.94
AFP-202ENST00000395792 KRTAP10-6P60371 365 aaPredicted RBP2.96□□□□□ -1.94
AFP-202ENST00000395792 KRTAP19-4Q3LI73 84 aa2.96□□□□□ -1.94
AFP-202ENST00000395792 M0QZ58 72 aa2.95□□□□□ -1.94
AFP-202ENST00000395792 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
AFP-202ENST00000395792 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
AFP-202ENST00000395792 KRTAP9-7A8MTY7 169 aa2.91□□□□□ -1.94
AFP-202ENST00000395792 PP632Q6XCG6 107 aa2.89□□□□□ -1.95
AFP-202ENST00000395792 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
AFP-202ENST00000395792 KRTAP13-4Q3LI77 160 aa2.84□□□□□ -1.96
AFP-202ENST00000395792 MT1HP80294 61 aa2.81□□□□□ -1.96
AFP-202ENST00000395792 RNF213Q63HN8 5207 aa2.79□□□□□ -1.96
AFP-202ENST00000395792 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
AFP-202ENST00000395792 A0A0D9SG42 100 aa2.78□□□□□ -1.96
AFP-202ENST00000395792 M0R2T5 61 aa2.78□□□□□ -1.96
AFP-202ENST00000395792 C10orf95Q9H7T3 257 aa2.77□□□□□ -1.97
AFP-202ENST00000395792 SPRR2GQ9BYE4 73 aa2.75□□□□□ -1.97
AFP-202ENST00000395792 MUC2Q02817 5179 aa2.73□□□□□ -1.97
AFP-202ENST00000395792 KRTAP9-3Q9BYQ3 159 aa2.71□□□□□ -1.97
AFP-202ENST00000395792 FAT4Q6V0I7 4981 aa2.71□□□□□ -1.98
AFP-202ENST00000395792 MT2AP02795 61 aa2.71□□□□□ -1.98
AFP-202ENST00000395792 UBR4Q5T4S7 5183 aa2.69□□□□□ -1.98
AFP-202ENST00000395792 KRTAP10-10P60014 251 aa2.69□□□□□ -1.98
AFP-202ENST00000395792 KRTAP2-2Q9BYT5 123 aa2.68□□□□□ -1.98
AFP-202ENST00000395792 MT1FP04733 61 aa2.67□□□□□ -1.98
AFP-202ENST00000395792 KRTAP19-8Q3LI54 63 aa2.67□□□□□ -1.98
AFP-202ENST00000395792 TNP1P09430 55 aa2.59□□□□□ -1.99
AFP-202ENST00000395792 MT1BP07438 61 aa2.57□□□□□ -2
AFP-202ENST00000395792 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
AFP-202ENST00000395792 MT3P25713 68 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms