RNA–Protein interactions for RNA: ENST00000394825.5

NR4A1-204, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR4A1, Length 2,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-204ENST00000394825 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
NR4A1-204ENST00000394825 APOBP04114 4563 aaKnown RBP8.63□□□□□ -1.03
NR4A1-204ENST00000394825 A0A0A0MQY5 61 aa8.62□□□□□ -1.03
NR4A1-204ENST00000394825 EPPK1P58107 5090 aaKnown RBP8.57□□□□□ -1.04
NR4A1-204ENST00000394825 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
NR4A1-204ENST00000394825 C10orf95Q9H7T3 257 aa8.53□□□□□ -1.04
NR4A1-204ENST00000394825 Q5VSD8 79 aa8.48□□□□□ -1.05
NR4A1-204ENST00000394825 KRTAP10-6P60371 365 aaPredicted RBP8.46□□□□□ -1.06
NR4A1-204ENST00000394825 FAT1Q14517 4588 aa8.46□□□□□ -1.06
NR4A1-204ENST00000394825 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
NR4A1-204ENST00000394825 PKHD1L1Q86WI1 4243 aa8.44□□□□□ -1.06
NR4A1-204ENST00000394825 A0A0D9SG42 100 aa8.41□□□□□ -1.06
NR4A1-204ENST00000394825 HSPG2P98160 4391 aa8.39□□□□□ -1.07
NR4A1-204ENST00000394825 RYR1P21817 5038 aa8.38□□□□□ -1.07
NR4A1-204ENST00000394825 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
NR4A1-204ENST00000394825 KRTAP10-8P60410 259 aa8.33□□□□□ -1.08
NR4A1-204ENST00000394825 BIRC6Q9NR09 4857 aa8.33□□□□□ -1.08
NR4A1-204ENST00000394825 S4R3F8 94 aa8.33□□□□□ -1.08
NR4A1-204ENST00000394825 C9orf92A6NGG3 77 aa8.3□□□□□ -1.08
NR4A1-204ENST00000394825 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
NR4A1-204ENST00000394825 KRTAP17-1Q9BYP8 105 aa8.28□□□□□ -1.08
NR4A1-204ENST00000394825 XP32Q5T750 250 aa8.26□□□□□ -1.09
NR4A1-204ENST00000394825 LUZP6Q538Z0 58 aa8.25□□□□□ -1.09
NR4A1-204ENST00000394825 KIAA1109Q2LD37 5005 aa8.24□□□□□ -1.09
NR4A1-204ENST00000394825 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
NR4A1-204ENST00000394825 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
NR4A1-204ENST00000394825 TNXBP22105 4242 aa8.17□□□□□ -1.1
NR4A1-204ENST00000394825 MT1HL1P0DM35 61 aa8.15□□□□□ -1.1
NR4A1-204ENST00000394825 KRTAP12-1P59990 96 aa8.15□□□□□ -1.1
NR4A1-204ENST00000394825 FAT3Q8TDW7 4589 aa8.15□□□□□ -1.11
NR4A1-204ENST00000394825 LRP1Q07954 4544 aaKnown RBP8.13□□□□□ -1.11
NR4A1-204ENST00000394825 HERC2O95714 4834 aa8.06□□□□□ -1.12
NR4A1-204ENST00000394825 KRTAP4-5Q9BYR2 181 aa8.04□□□□□ -1.12
NR4A1-204ENST00000394825 PCLOQ9Y6V0 5065 aa8.03□□□□□ -1.12
NR4A1-204ENST00000394825 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
NR4A1-204ENST00000394825 MYCBP2O75592 4640 aa7.97□□□□□ -1.13
NR4A1-204ENST00000394825 ABCA13Q86UQ4 5058 aa7.95□□□□□ -1.14
NR4A1-204ENST00000394825 M0QZ58 72 aa7.93□□□□□ -1.14
NR4A1-204ENST00000394825 J3QL48 77 aa7.88□□□□□ -1.15
NR4A1-204ENST00000394825 SEC61BP60468 96 aaKnown RBP7.7□□□□□ -1.18
NR4A1-204ENST00000394825 HERC1Q15751 4861 aa7.67□□□□□ -1.18
NR4A1-204ENST00000394825 PP632Q6XCG6 107 aa7.61□□□□□ -1.19
NR4A1-204ENST00000394825 LRP2P98164 4655 aa7.55□□□□□ -1.2
NR4A1-204ENST00000394825 LPAP08519 4548 aa7.55□□□□□ -1.2
NR4A1-204ENST00000394825 R4GN34 69 aa7.52□□□□□ -1.21
NR4A1-204ENST00000394825 MUC17Q685J3 4493 aa7.41□□□□□ -1.22
NR4A1-204ENST00000394825 SPRR5A0A1B0GTR4 108 aa7.4□□□□□ -1.23
NR4A1-204ENST00000394825 CAMK2N1Q7Z7J9 78 aa7.38□□□□□ -1.23
NR4A1-204ENST00000394825 KRTAP4-1Q9BYQ7 146 aa7.36□□□□□ -1.23
NR4A1-204ENST00000394825 HMCN2Q8NDA2 5059 aa7.34□□□□□ -1.23
NR4A1-204ENST00000394825 PRO2289Q9P1D8 64 aa7.31□□□□□ -1.24
NR4A1-204ENST00000394825 LORP23490 312 aaPredicted RBP7.28□□□□□ -1.24
NR4A1-204ENST00000394825 UBR4Q5T4S7 5183 aa7.26□□□□□ -1.25
NR4A1-204ENST00000394825 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
NR4A1-204ENST00000394825 KRTAP19-2Q3LHN2 52 aa7.22□□□□□ -1.25
NR4A1-204ENST00000394825 RNF213Q63HN8 5207 aa7.09□□□□□ -1.27
NR4A1-204ENST00000394825 INE1O15225 51 aa7.08□□□□□ -1.28
NR4A1-204ENST00000394825 TNP1P09430 55 aa7.08□□□□□ -1.28
NR4A1-204ENST00000394825 MUC2Q02817 5179 aa7.01□□□□□ -1.29
NR4A1-204ENST00000394825 LCE2CQ5TA81 110 aa6.99□□□□□ -1.29
NR4A1-204ENST00000394825 FLGP20930 4061 aaPredicted RBP6.98□□□□□ -1.29
NR4A1-204ENST00000394825 MT1HP80294 61 aa6.86□□□□□ -1.31
NR4A1-204ENST00000394825 M0R2T5 61 aa6.81□□□□□ -1.32
NR4A1-204ENST00000394825 FAT4Q6V0I7 4981 aa6.73□□□□□ -1.33
NR4A1-204ENST00000394825 KRTAP9-8Q9BYQ0 159 aa6.62□□□□□ -1.35
NR4A1-204ENST00000394825 MT2AP02795 61 aa6.61□□□□□ -1.35
NR4A1-204ENST00000394825 LCE3AQ5TA76 89 aa6.59□□□□□ -1.35
NR4A1-204ENST00000394825 SPRR2GQ9BYE4 73 aa6.58□□□□□ -1.36
NR4A1-204ENST00000394825 MT1FP04733 61 aa6.57□□□□□ -1.36
NR4A1-204ENST00000394825 KRTAP10-10P60014 251 aa6.57□□□□□ -1.36
NR4A1-204ENST00000394825 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
NR4A1-204ENST00000394825 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
NR4A1-204ENST00000394825 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
NR4A1-204ENST00000394825 KRTAP19-8Q3LI54 63 aa6.39□□□□□ -1.39
NR4A1-204ENST00000394825 KRTAP9-3Q9BYQ3 159 aa6.38□□□□□ -1.39
NR4A1-204ENST00000394825 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
NR4A1-204ENST00000394825 MT1BP07438 61 aa6.26□□□□□ -1.41
NR4A1-204ENST00000394825 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
NR4A1-204ENST00000394825 KRTAP9-2Q9BYQ4 174 aa6.25□□□□□ -1.41
NR4A1-204ENST00000394825 FSIP2Q5CZC0 6907 aa6.21□□□□□ -1.42
NR4A1-204ENST00000394825 LCE2BO14633 110 aa6.16□□□□□ -1.42
NR4A1-204ENST00000394825 KRTAP10-5P60370 271 aa6.12□□□□□ -1.43
NR4A1-204ENST00000394825 MT1XP80297 61 aa6.08□□□□□ -1.44
NR4A1-204ENST00000394825 KRTAP9-6A0A140TA67 174 aa5.98□□□□□ -1.45
NR4A1-204ENST00000394825 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
NR4A1-204ENST00000394825 LCE2DQ5TA82 110 aaPredicted RBP5.94□□□□□ -1.46
NR4A1-204ENST00000394825 USH2AO75445 5202 aa5.91□□□□□ -1.46
NR4A1-204ENST00000394825 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
NR4A1-204ENST00000394825 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
NR4A1-204ENST00000394825 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
NR4A1-204ENST00000394825 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
NR4A1-204ENST00000394825 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
NR4A1-204ENST00000394825 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
NR4A1-204ENST00000394825 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
NR4A1-204ENST00000394825 SSPOA2VEC9 5147 aa5.75□□□□□ -1.49
NR4A1-204ENST00000394825 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
NR4A1-204ENST00000394825 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
NR4A1-204ENST00000394825 KRTAP4-8A0A0G2JLE6 195 aa5.54□□□□□ -1.52
NR4A1-204ENST00000394825 KRTAP4-8Q9BYQ9 185 aa5.54□□□□□ -1.52
NR4A1-204ENST00000394825 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms