RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 RYR3Q15413 4870 aa10.33□□□□□ -0.76
RCCD1-201ENST00000394258 KRTAP17-1Q9BYP8 105 aa10.31□□□□□ -0.76
RCCD1-201ENST00000394258 MYCBP2O75592 4640 aa10.31□□□□□ -0.76
RCCD1-201ENST00000394258 COX6B2Q6YFQ2 88 aa10.24□□□□□ -0.77
RCCD1-201ENST00000394258 KIAA1109Q2LD37 5005 aa10.23□□□□□ -0.77
RCCD1-201ENST00000394258 RYR1P21817 5038 aa10.21□□□□□ -0.77
RCCD1-201ENST00000394258 KRTAP25-1Q3LHN0 102 aa10.21□□□□□ -0.77
RCCD1-201ENST00000394258 A0A1B0GU33 70 aa10.2□□□□□ -0.78
RCCD1-201ENST00000394258 XP32Q5T750 250 aa10.16□□□□□ -0.78
RCCD1-201ENST00000394258 RPL37P61927 97 aaKnown RBP10.15□□□□□ -0.78
RCCD1-201ENST00000394258 ROMO1P60602 79 aa10.13□□□□□ -0.79
RCCD1-201ENST00000394258 H1FX-AS1Q4G0G2 97 aa10.12□□□□□ -0.79
RCCD1-201ENST00000394258 MT1HL1P0DM35 61 aa10.08□□□□□ -0.8
RCCD1-201ENST00000394258 KRTAP3-3Q9BYR6 98 aa10□□□□□ -0.81
RCCD1-201ENST00000394258 EPPK1P58107 5090 aaKnown RBP9.99□□□□□ -0.81
RCCD1-201ENST00000394258 LPAP08519 4548 aa9.95□□□□□ -0.82
RCCD1-201ENST00000394258 LRP2P98164 4655 aa9.92□□□□□ -0.82
RCCD1-201ENST00000394258 P0C880 135 aa9.92□□□□□ -0.82
RCCD1-201ENST00000394258 S4R3F8 94 aa9.91□□□□□ -0.82
RCCD1-201ENST00000394258 K7ERS5 55 aa9.91□□□□□ -0.82
RCCD1-201ENST00000394258 KRTAP10-6P60371 365 aaPredicted RBP9.9□□□□□ -0.82
RCCD1-201ENST00000394258 A0A0D9SG42 100 aa9.88□□□□□ -0.83
RCCD1-201ENST00000394258 KRTAP13-4Q3LI77 160 aa9.86□□□□□ -0.83
RCCD1-201ENST00000394258 KRTAP4-5Q9BYR2 181 aa9.84□□□□□ -0.83
RCCD1-201ENST00000394258 KRTAP3-2Q9BYR7 98 aa9.84□□□□□ -0.83
RCCD1-201ENST00000394258 ABCA13Q86UQ4 5058 aa9.83□□□□□ -0.84
RCCD1-201ENST00000394258 C10orf95Q9H7T3 257 aa9.77□□□□□ -0.85
RCCD1-201ENST00000394258 TPRXLQ17RH7 258 aa9.76□□□□□ -0.85
RCCD1-201ENST00000394258 SPINT4Q6UDR6 99 aa9.75□□□□□ -0.85
RCCD1-201ENST00000394258 NDUFAF8A1L188 74 aa9.54□□□□□ -0.88
RCCD1-201ENST00000394258 KRTAP12-2P59991 146 aa9.51□□□□□ -0.89
RCCD1-201ENST00000394258 J3QL48 77 aa9.48□□□□□ -0.89
RCCD1-201ENST00000394258 SEC61BP60468 96 aaKnown RBP9.42□□□□□ -0.9
RCCD1-201ENST00000394258 KRTAP15-1Q3LI76 137 aa9.42□□□□□ -0.9
RCCD1-201ENST00000394258 HERC2O95714 4834 aa9.42□□□□□ -0.9
RCCD1-201ENST00000394258 KRTAP12-1P59990 96 aa9.4□□□□□ -0.9
RCCD1-201ENST00000394258 KRTAP4-1Q9BYQ7 146 aa9.4□□□□□ -0.9
RCCD1-201ENST00000394258 MUC17Q685J3 4493 aa9.36□□□□□ -0.91
RCCD1-201ENST00000394258 M0QZ58 72 aa9.32□□□□□ -0.92
RCCD1-201ENST00000394258 MUC2Q02817 5179 aa9.27□□□□□ -0.92
RCCD1-201ENST00000394258 R4GN34 69 aa9.24□□□□□ -0.93
RCCD1-201ENST00000394258 LORP23490 312 aaPredicted RBP9.21□□□□□ -0.94
RCCD1-201ENST00000394258 KRTAP19-2Q3LHN2 52 aa9.12□□□□□ -0.95
RCCD1-201ENST00000394258 BIRC6Q9NR09 4857 aa9.07□□□□□ -0.96
RCCD1-201ENST00000394258 HERC1Q15751 4861 aa9.05□□□□□ -0.96
RCCD1-201ENST00000394258 A0A0A0MQY5 61 aa9.02□□□□□ -0.97
RCCD1-201ENST00000394258 PCLOQ9Y6V0 5065 aa9□□□□□ -0.97
RCCD1-201ENST00000394258 FLGP20930 4061 aaPredicted RBP8.89□□□□□ -0.99
RCCD1-201ENST00000394258 PLAC4Q8WY50 150 aa8.84□□□□□ -0.99
RCCD1-201ENST00000394258 HMCN2Q8NDA2 5059 aa8.83□□□□□ -1
RCCD1-201ENST00000394258 FAT4Q6V0I7 4981 aa8.8□□□□□ -1
RCCD1-201ENST00000394258 LUZP6Q538Z0 58 aa8.77□□□□□ -1
RCCD1-201ENST00000394258 CAMK2N1Q7Z7J9 78 aa8.77□□□□□ -1.01
RCCD1-201ENST00000394258 RNF213Q63HN8 5207 aa8.66□□□□□ -1.02
RCCD1-201ENST00000394258 LCE2CQ5TA81 110 aa8.66□□□□□ -1.02
RCCD1-201ENST00000394258 UBR4Q5T4S7 5183 aa8.6□□□□□ -1.03
RCCD1-201ENST00000394258 M0R2T5 61 aa8.57□□□□□ -1.04
RCCD1-201ENST00000394258 MT1HP80294 61 aa8.45□□□□□ -1.06
RCCD1-201ENST00000394258 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
RCCD1-201ENST00000394258 PP632Q6XCG6 107 aa8.37□□□□□ -1.07
RCCD1-201ENST00000394258 SPRR2GQ9BYE4 73 aa8.36□□□□□ -1.07
RCCD1-201ENST00000394258 TNP1P09430 55 aa8.36□□□□□ -1.07
RCCD1-201ENST00000394258 KRTAP10-10P60014 251 aa8.33□□□□□ -1.08
RCCD1-201ENST00000394258 MT1FP04733 61 aa8.3□□□□□ -1.08
RCCD1-201ENST00000394258 MT2AP02795 61 aa8.28□□□□□ -1.08
RCCD1-201ENST00000394258 KRTAP9-8Q9BYQ0 159 aa8.23□□□□□ -1.09
RCCD1-201ENST00000394258 KRTAP23-1A1A580 65 aa8.06□□□□□ -1.12
RCCD1-201ENST00000394258 LCE3AQ5TA76 89 aa7.99□□□□□ -1.13
RCCD1-201ENST00000394258 KRTAP19-8Q3LI54 63 aa7.98□□□□□ -1.13
RCCD1-201ENST00000394258 SPRR5A0A1B0GTR4 108 aa7.97□□□□□ -1.13
RCCD1-201ENST00000394258 MT1BP07438 61 aa7.96□□□□□ -1.13
RCCD1-201ENST00000394258 KRTAP10-5P60370 271 aa7.89□□□□□ -1.15
RCCD1-201ENST00000394258 MT1XP80297 61 aa7.88□□□□□ -1.15
RCCD1-201ENST00000394258 KRTAP9-3Q9BYQ3 159 aa7.87□□□□□ -1.15
RCCD1-201ENST00000394258 KRTAP10-7P60409 375 aaPredicted RBP7.7□□□□□ -1.18
RCCD1-201ENST00000394258 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
RCCD1-201ENST00000394258 USH2AO75445 5202 aa7.69□□□□□ -1.18
RCCD1-201ENST00000394258 KRTAP10-12P60413 245 aa7.69□□□□□ -1.18
RCCD1-201ENST00000394258 KRTAP8-1Q8IUC2 63 aa7.69□□□□□ -1.18
RCCD1-201ENST00000394258 LCE2BO14633 110 aa7.63□□□□□ -1.19
RCCD1-201ENST00000394258 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
RCCD1-201ENST00000394258 LCE2AQ5TA79 106 aaPredicted RBP7.51□□□□□ -1.21
RCCD1-201ENST00000394258 KMT2DO14686 5537 aa7.49□□□□□ -1.21
RCCD1-201ENST00000394258 INE1O15225 51 aa7.45□□□□□ -1.22
RCCD1-201ENST00000394258 KRTAP19-5Q3LI72 72 aa7.34□□□□□ -1.23
RCCD1-201ENST00000394258 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
RCCD1-201ENST00000394258 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
RCCD1-201ENST00000394258 FSIP2Q5CZC0 6907 aa7.15□□□□□ -1.27
RCCD1-201ENST00000394258 LCE3CQ5T5A8 94 aa7.11□□□□□ -1.27
RCCD1-201ENST00000394258 SSPOA2VEC9 5147 aa7.02□□□□□ -1.29
RCCD1-201ENST00000394258 KRTAP19-7Q3SYF9 63 aa7.02□□□□□ -1.29
RCCD1-201ENST00000394258 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.3
RCCD1-201ENST00000394258 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
RCCD1-201ENST00000394258 MT1EP04732 61 aa6.82□□□□□ -1.32
RCCD1-201ENST00000394258 MT1LQ93083 61 aa6.8□□□□□ -1.32
RCCD1-201ENST00000394258 KRTAP19-6Q3LI70 58 aa6.79□□□□□ -1.32
RCCD1-201ENST00000394258 FCGBPQ9Y6R7 5405 aaPredicted RBP6.68□□□□□ -1.34
RCCD1-201ENST00000394258 MUC12Q9UKN1 5478 aa6.63□□□□□ -1.35
RCCD1-201ENST00000394258 KRTAP2-3P0C7H8 128 aa6.56□□□□□ -1.36
RCCD1-201ENST00000394258 KRTAP4-3Q9BYR4 195 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms