RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 KRTAP4-1Q9BYQ7 146 aa9.03□□□□□ -0.96
CLDND1-204ENST00000394185 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
CLDND1-204ENST00000394185 SVIPQ8NHG7 77 aa9.03□□□□□ -0.96
CLDND1-204ENST00000394185 A0A1B0GU69 56 aa9.02□□□□□ -0.97
CLDND1-204ENST00000394185 A8MU10 97 aa9.02□□□□□ -0.97
CLDND1-204ENST00000394185 LCA10Q71F78 164 aa9.01□□□□□ -0.97
CLDND1-204ENST00000394185 KRTAP3-3Q9BYR6 98 aa9□□□□□ -0.97
CLDND1-204ENST00000394185 SPTSSBQ8NFR3 76 aa8.97□□□□□ -0.97
CLDND1-204ENST00000394185 A6NED7 52 aa8.97□□□□□ -0.97
CLDND1-204ENST00000394185 H1FX-AS1Q4G0G2 97 aa8.94□□□□□ -0.98
CLDND1-204ENST00000394185 S4R3F8 94 aa8.94□□□□□ -0.98
CLDND1-204ENST00000394185 RBM12B-AS1Q9P1G2 102 aa8.93□□□□□ -0.98
CLDND1-204ENST00000394185 PRO0628Q9UI54 55 aa8.89□□□□□ -0.99
CLDND1-204ENST00000394185 SEC61GP60059 68 aa8.85□□□□□ -0.99
CLDND1-204ENST00000394185 UBR4Q5T4S7 5183 aa8.81□□□□□ -1
CLDND1-204ENST00000394185 CDC42SE1Q9NRR8 79 aa8.8□□□□□ -1
CLDND1-204ENST00000394185 KRTAP19-2Q3LHN2 52 aa8.78□□□□□ -1
CLDND1-204ENST00000394185 UQCR11O14957 56 aa8.76□□□□□ -1.01
CLDND1-204ENST00000394185 RNF213Q63HN8 5207 aa8.74□□□□□ -1.01
CLDND1-204ENST00000394185 KRTAP10-6P60371 365 aaPredicted RBP8.72□□□□□ -1.01
CLDND1-204ENST00000394185 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
CLDND1-204ENST00000394185 MIR22HGQ0VDD5 57 aa8.71□□□□□ -1.01
CLDND1-204ENST00000394185 A0A1B0GU33 70 aa8.69□□□□□ -1.02
CLDND1-204ENST00000394185 SPATA8Q6RVD6 105 aa8.69□□□□□ -1.02
CLDND1-204ENST00000394185 CSAG1Q6PB30 78 aa8.68□□□□□ -1.02
CLDND1-204ENST00000394185 FAT4Q6V0I7 4981 aa8.67□□□□□ -1.02
CLDND1-204ENST00000394185 H0YAA0 97 aa8.67□□□□□ -1.02
CLDND1-204ENST00000394185 FLGP20930 4061 aaPredicted RBP8.66□□□□□ -1.02
CLDND1-204ENST00000394185 P0C880 135 aa8.66□□□□□ -1.02
CLDND1-204ENST00000394185 ADM2Q7Z4H4 148 aa8.62□□□□□ -1.03
CLDND1-204ENST00000394185 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
CLDND1-204ENST00000394185 PMAIP1Q13794 54 aa8.54□□□□□ -1.04
CLDND1-204ENST00000394185 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
CLDND1-204ENST00000394185 A6NN06 94 aa8.46□□□□□ -1.05
CLDND1-204ENST00000394185 A0A0D9SG42 100 aa8.42□□□□□ -1.06
CLDND1-204ENST00000394185 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
CLDND1-204ENST00000394185 MT1HP80294 61 aa8.29□□□□□ -1.08
CLDND1-204ENST00000394185 M0QZ58 72 aa8.28□□□□□ -1.08
CLDND1-204ENST00000394185 R4GN34 69 aa8.26□□□□□ -1.09
CLDND1-204ENST00000394185 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
CLDND1-204ENST00000394185 LINC01554Q52M75 96 aa8.22□□□□□ -1.09
CLDND1-204ENST00000394185 M0R2T5 61 aa8.21□□□□□ -1.1
CLDND1-204ENST00000394185 KTN1-AS1Q86SY8 53 aa8.21□□□□□ -1.1
CLDND1-204ENST00000394185 KRTAP12-1P59990 96 aa8.18□□□□□ -1.1
CLDND1-204ENST00000394185 K7ERS5 55 aa8.17□□□□□ -1.1
CLDND1-204ENST00000394185 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
CLDND1-204ENST00000394185 PRAC1Q96KF2 57 aa8.09□□□□□ -1.11
CLDND1-204ENST00000394185 KRTAP9-8Q9BYQ0 159 aa8.01□□□□□ -1.13
CLDND1-204ENST00000394185 MT2AP02795 61 aa8□□□□□ -1.13
CLDND1-204ENST00000394185 MT1FP04733 61 aa8□□□□□ -1.13
CLDND1-204ENST00000394185 CRIPTQ9P021 101 aa7.98□□□□□ -1.13
CLDND1-204ENST00000394185 ROMO1P60602 79 aa7.95□□□□□ -1.14
CLDND1-204ENST00000394185 KRTAP10-10P60014 251 aa7.93□□□□□ -1.14
CLDND1-204ENST00000394185 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
CLDND1-204ENST00000394185 SPRR2GQ9BYE4 73 aa7.88□□□□□ -1.15
CLDND1-204ENST00000394185 LCE2AQ5TA79 106 aaPredicted RBP7.78□□□□□ -1.16
CLDND1-204ENST00000394185 CAMK2N1Q7Z7J9 78 aa7.76□□□□□ -1.17
CLDND1-204ENST00000394185 C10orf95Q9H7T3 257 aa7.76□□□□□ -1.17
CLDND1-204ENST00000394185 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
CLDND1-204ENST00000394185 KRTAP9-3Q9BYQ3 159 aa7.7□□□□□ -1.18
CLDND1-204ENST00000394185 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
CLDND1-204ENST00000394185 KRTAP19-8Q3LI54 63 aa7.63□□□□□ -1.19
CLDND1-204ENST00000394185 MT1BP07438 61 aa7.59□□□□□ -1.19
CLDND1-204ENST00000394185 USH2AO75445 5202 aa7.55□□□□□ -1.2
CLDND1-204ENST00000394185 LCE2BO14633 110 aa7.5□□□□□ -1.21
CLDND1-204ENST00000394185 MT1XP80297 61 aa7.4□□□□□ -1.22
CLDND1-204ENST00000394185 KRTAP10-5P60370 271 aa7.4□□□□□ -1.23
CLDND1-204ENST00000394185 TNP1P09430 55 aa7.37□□□□□ -1.23
CLDND1-204ENST00000394185 FSIP2Q5CZC0 6907 aa7.23□□□□□ -1.25
CLDND1-204ENST00000394185 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
CLDND1-204ENST00000394185 SSPOA2VEC9 5147 aa7.17□□□□□ -1.26
CLDND1-204ENST00000394185 KRTAP10-7P60409 375 aaPredicted RBP7.16□□□□□ -1.26
CLDND1-204ENST00000394185 PRO2289Q9P1D8 64 aa7.15□□□□□ -1.27
CLDND1-204ENST00000394185 LCE3AQ5TA76 89 aa7.14□□□□□ -1.27
CLDND1-204ENST00000394185 KRTAP23-1A1A580 65 aa7.1□□□□□ -1.27
CLDND1-204ENST00000394185 KMT2DO14686 5537 aa7.1□□□□□ -1.27
CLDND1-204ENST00000394185 KRTAP10-12P60413 245 aa7.04□□□□□ -1.28
CLDND1-204ENST00000394185 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
CLDND1-204ENST00000394185 KRTAP8-1Q8IUC2 63 aa6.92□□□□□ -1.3
CLDND1-204ENST00000394185 LCE2DQ5TA82 110 aaPredicted RBP6.89□□□□□ -1.31
CLDND1-204ENST00000394185 KRTAP19-6Q3LI70 58 aa6.88□□□□□ -1.31
CLDND1-204ENST00000394185 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
CLDND1-204ENST00000394185 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
CLDND1-204ENST00000394185 KRTAP12-3P60328 96 aa6.8□□□□□ -1.32
CLDND1-204ENST00000394185 FCGBPQ9Y6R7 5405 aaPredicted RBP6.79□□□□□ -1.32
CLDND1-204ENST00000394185 KRTAP19-5Q3LI72 72 aa6.74□□□□□ -1.33
CLDND1-204ENST00000394185 LOC100996750A0A140TA64 210 aa6.66□□□□□ -1.34
CLDND1-204ENST00000394185 KRTAP4-6Q9BYQ5 205 aa6.66□□□□□ -1.34
CLDND1-204ENST00000394185 KRTAP9-2Q9BYQ4 174 aa6.63□□□□□ -1.35
CLDND1-204ENST00000394185 KRTAP19-7Q3SYF9 63 aa6.61□□□□□ -1.35
CLDND1-204ENST00000394185 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
CLDND1-204ENST00000394185 NDUFAF8A1L188 74 aa6.51□□□□□ -1.37
CLDND1-204ENST00000394185 MACF1Q9UPN3 7388 aaKnown RBP6.5□□□□□ -1.37
CLDND1-204ENST00000394185 MUC12Q9UKN1 5478 aa6.45□□□□□ -1.38
CLDND1-204ENST00000394185 MT1EP04732 61 aa6.45□□□□□ -1.38
CLDND1-204ENST00000394185 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.39
CLDND1-204ENST00000394185 LUZP6Q538Z0 58 aa6.37□□□□□ -1.39
CLDND1-204ENST00000394185 SYNE2Q8WXH0 6885 aaKnown RBP6.37□□□□□ -1.39
CLDND1-204ENST00000394185 LCE3CQ5T5A8 94 aa6.36□□□□□ -1.39
CLDND1-204ENST00000394185 H3BS24 57 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms