RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 MT1HP80294 61 aa11.85□□□□□ -0.51
LRFN4-202ENST00000393952 COA5Q86WW8 74 aa11.85□□□□□ -0.51
LRFN4-202ENST00000393952 KRTAP3-3Q9BYR6 98 aa11.8□□□□□ -0.52
LRFN4-202ENST00000393952 CHKB-CPT1BH3BT56 60 aa11.79□□□□□ -0.52
LRFN4-202ENST00000393952 M0R2T5 61 aa11.71□□□□□ -0.54
LRFN4-202ENST00000393952 CSAG1Q6PB30 78 aa11.68□□□□□ -0.54
LRFN4-202ENST00000393952 SERP1Q9Y6X1 66 aa11.67□□□□□ -0.54
LRFN4-202ENST00000393952 LCE2AQ5TA79 106 aaPredicted RBP11.64□□□□□ -0.55
LRFN4-202ENST00000393952 SPTSSBQ8NFR3 76 aa11.62□□□□□ -0.55
LRFN4-202ENST00000393952 KRTAP10-6P60371 365 aaPredicted RBP11.47□□□□□ -0.57
LRFN4-202ENST00000393952 RPS28P62857 69 aaKnown RBP11.46□□□□□ -0.57
LRFN4-202ENST00000393952 LORP23490 312 aaPredicted RBP11.41□□□□□ -0.58
LRFN4-202ENST00000393952 H0YAA0 97 aa11.36□□□□□ -0.59
LRFN4-202ENST00000393952 KRTAP9-8Q9BYQ0 159 aa11.36□□□□□ -0.59
LRFN4-202ENST00000393952 ADM2Q7Z4H4 148 aa11.34□□□□□ -0.59
LRFN4-202ENST00000393952 SMIM26A0A096LP01 95 aa11.32□□□□□ -0.6
LRFN4-202ENST00000393952 MT2AP02795 61 aa11.32□□□□□ -0.6
LRFN4-202ENST00000393952 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
LRFN4-202ENST00000393952 LINC01558Q9Y6Z2 57 aa11.26□□□□□ -0.61
LRFN4-202ENST00000393952 MT1FP04733 61 aa11.24□□□□□ -0.61
LRFN4-202ENST00000393952 P0C880 135 aa11.24□□□□□ -0.61
LRFN4-202ENST00000393952 SEC61GP60059 68 aa11.22□□□□□ -0.61
LRFN4-202ENST00000393952 A0A1B0GU69 56 aa11.2□□□□□ -0.62
LRFN4-202ENST00000393952 KRTAP10-10P60014 251 aa11.2□□□□□ -0.62
LRFN4-202ENST00000393952 Q1T7F1 81 aa11.18□□□□□ -0.62
LRFN4-202ENST00000393952 V9GYY9 64 aa11.16□□□□□ -0.62
LRFN4-202ENST00000393952 PRR15LQ9BU68 103 aa11.11□□□□□ -0.63
LRFN4-202ENST00000393952 PSPHP1O15172 72 aa11.04□□□□□ -0.64
LRFN4-202ENST00000393952 CRIPTQ9P021 101 aa10.99□□□□□ -0.65
LRFN4-202ENST00000393952 A0A1B0GU33 70 aa10.98□□□□□ -0.65
LRFN4-202ENST00000393952 KRTAP9-3Q9BYQ3 159 aa10.97□□□□□ -0.65
LRFN4-202ENST00000393952 R4GN34 69 aa10.95□□□□□ -0.66
LRFN4-202ENST00000393952 M0QZ58 72 aa10.94□□□□□ -0.66
LRFN4-202ENST00000393952 Q5VV11 94 aa10.93□□□□□ -0.66
LRFN4-202ENST00000393952 KRTAP13-4Q3LI77 160 aa10.9□□□□□ -0.66
LRFN4-202ENST00000393952 KRTAP19-1Q8IUB9 90 aa10.9□□□□□ -0.66
LRFN4-202ENST00000393952 SPRR2GQ9BYE4 73 aa10.87□□□□□ -0.67
LRFN4-202ENST00000393952 SPATA8Q6RVD6 105 aa10.84□□□□□ -0.67
LRFN4-202ENST00000393952 UQCR11O14957 56 aa10.78□□□□□ -0.68
LRFN4-202ENST00000393952 LINC01554Q52M75 96 aa10.76□□□□□ -0.69
LRFN4-202ENST00000393952 LCE2BO14633 110 aa10.73□□□□□ -0.69
LRFN4-202ENST00000393952 LCE2DQ5TA82 110 aaPredicted RBP10.7□□□□□ -0.7
LRFN4-202ENST00000393952 A6NED7 52 aa10.69□□□□□ -0.7
LRFN4-202ENST00000393952 A0A0D9SG42 100 aa10.66□□□□□ -0.7
LRFN4-202ENST00000393952 KRTAP19-8Q3LI54 63 aa10.66□□□□□ -0.7
LRFN4-202ENST00000393952 A8MU10 97 aa10.65□□□□□ -0.71
LRFN4-202ENST00000393952 MIR22HGQ0VDD5 57 aa10.65□□□□□ -0.71
LRFN4-202ENST00000393952 USH2AO75445 5202 aa10.58□□□□□ -0.72
LRFN4-202ENST00000393952 MT1BP07438 61 aa10.56□□□□□ -0.72
LRFN4-202ENST00000393952 A6NN06 94 aa10.51□□□□□ -0.73
LRFN4-202ENST00000393952 KRTAP9-2Q9BYQ4 174 aa10.49□□□□□ -0.73
LRFN4-202ENST00000393952 KRTAP12-1P59990 96 aa10.45□□□□□ -0.74
LRFN4-202ENST00000393952 SPINT4Q6UDR6 99 aa10.43□□□□□ -0.74
LRFN4-202ENST00000393952 PLAC4Q8WY50 150 aa10.43□□□□□ -0.74
LRFN4-202ENST00000393952 CDC42SE1Q9NRR8 79 aa10.43□□□□□ -0.74
LRFN4-202ENST00000393952 KRTAP12-2P59991 146 aa10.41□□□□□ -0.74
LRFN4-202ENST00000393952 FSIP2Q5CZC0 6907 aa10.34□□□□□ -0.75
LRFN4-202ENST00000393952 BRK1Q8WUW1 75 aa10.3□□□□□ -0.76
LRFN4-202ENST00000393952 SSPOA2VEC9 5147 aa10.29□□□□□ -0.76
LRFN4-202ENST00000393952 CAMK2N1Q7Z7J9 78 aa10.22□□□□□ -0.77
LRFN4-202ENST00000393952 K7ERS5 55 aa10.21□□□□□ -0.78
LRFN4-202ENST00000393952 KRTAP19-6Q3LI70 58 aa10.14□□□□□ -0.79
LRFN4-202ENST00000393952 MT1XP80297 61 aa10.14□□□□□ -0.79
LRFN4-202ENST00000393952 KRTAP10-5P60370 271 aa10.1□□□□□ -0.79
LRFN4-202ENST00000393952 CRCT1Q9UGL9 99 aa10.06□□□□□ -0.8
LRFN4-202ENST00000393952 KRTAP9-6A0A140TA67 174 aa10.03□□□□□ -0.8
LRFN4-202ENST00000393952 PRO2289Q9P1D8 64 aa10.03□□□□□ -0.8
LRFN4-202ENST00000393952 C10orf95Q9H7T3 257 aa9.92□□□□□ -0.82
LRFN4-202ENST00000393952 FCGBPQ9Y6R7 5405 aaPredicted RBP9.9□□□□□ -0.82
LRFN4-202ENST00000393952 PRO0628Q9UI54 55 aa9.86□□□□□ -0.83
LRFN4-202ENST00000393952 ROMO1P60602 79 aa9.75□□□□□ -0.85
LRFN4-202ENST00000393952 KRTAP10-7P60409 375 aaPredicted RBP9.71□□□□□ -0.85
LRFN4-202ENST00000393952 PMAIP1Q13794 54 aa9.71□□□□□ -0.85
LRFN4-202ENST00000393952 TNP1P09430 55 aa9.65□□□□□ -0.86
LRFN4-202ENST00000393952 KRTAP10-12P60413 245 aa9.59□□□□□ -0.87
LRFN4-202ENST00000393952 KRTAP25-1Q3LHN0 102 aa9.57□□□□□ -0.88
LRFN4-202ENST00000393952 MACF1Q9UPN3 7388 aaKnown RBP9.48□□□□□ -0.89
LRFN4-202ENST00000393952 KMT2DO14686 5537 aa9.43□□□□□ -0.9
LRFN4-202ENST00000393952 KRTAP4-8A0A0G2JLE6 195 aa9.42□□□□□ -0.9
LRFN4-202ENST00000393952 KRTAP4-8Q9BYQ9 185 aa9.42□□□□□ -0.9
LRFN4-202ENST00000393952 LCE3AQ5TA76 89 aa9.34□□□□□ -0.91
LRFN4-202ENST00000393952 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.33□□□□□ -0.92
LRFN4-202ENST00000393952 KRTAP8-1Q8IUC2 63 aa9.24□□□□□ -0.93
LRFN4-202ENST00000393952 SYNE2Q8WXH0 6885 aaKnown RBP9.23□□□□□ -0.93
LRFN4-202ENST00000393952 KRTAP23-1A1A580 65 aa9.21□□□□□ -0.93
LRFN4-202ENST00000393952 KTN1-AS1Q86SY8 53 aa9.19□□□□□ -0.94
LRFN4-202ENST00000393952 PRAC1Q96KF2 57 aa9.19□□□□□ -0.94
LRFN4-202ENST00000393952 PP632Q6XCG6 107 aa9.13□□□□□ -0.95
LRFN4-202ENST00000393952 KRTAP19-5Q3LI72 72 aa9.07□□□□□ -0.96
LRFN4-202ENST00000393952 KRTAP19-7Q3SYF9 63 aa9.04□□□□□ -0.96
LRFN4-202ENST00000393952 KRTAP9-7A8MTY7 169 aa9.03□□□□□ -0.96
LRFN4-202ENST00000393952 KRTAP6-3Q3LI67 103 aa9□□□□□ -0.97
LRFN4-202ENST00000393952 SPRR2FQ96RM1 72 aa8.99□□□□□ -0.97
LRFN4-202ENST00000393952 KRTAP5-9P26371 169 aa8.99□□□□□ -0.97
LRFN4-202ENST00000393952 KRTAP12-3P60328 96 aa8.97□□□□□ -0.97
LRFN4-202ENST00000393952 MT1EP04732 61 aa8.9□□□□□ -0.98
LRFN4-202ENST00000393952 MUC12Q9UKN1 5478 aa8.86□□□□□ -0.99
LRFN4-202ENST00000393952 SVIPQ8NHG7 77 aa8.71□□□□□ -1.02
LRFN4-202ENST00000393952 KRTAP15-1Q3LI76 137 aa8.69□□□□□ -1.02
LRFN4-202ENST00000393952 MDN1Q9NU22 5596 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms