RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
TDP1-203ENST00000393454 CHKB-CPT1BH3BT56 60 aa4.48□□□□□ -1.69
TDP1-203ENST00000393454 A8MUN3 132 aa4.47□□□□□ -1.69
TDP1-203ENST00000393454 COX6B2Q6YFQ2 88 aa4.45□□□□□ -1.7
TDP1-203ENST00000393454 MPLKIPQ8TAP9 179 aa4.45□□□□□ -1.7
TDP1-203ENST00000393454 KRTAP3-1Q9BYR8 98 aa4.44□□□□□ -1.7
TDP1-203ENST00000393454 KRTAP4-8A0A0G2JLE6 195 aa4.41□□□□□ -1.7
TDP1-203ENST00000393454 RBM12B-AS1Q9P1G2 102 aa4.4□□□□□ -1.71
TDP1-203ENST00000393454 HMCN2Q8NDA2 5059 aa4.39□□□□□ -1.71
TDP1-203ENST00000393454 Q1T7F1 81 aa4.38□□□□□ -1.71
TDP1-203ENST00000393454 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
TDP1-203ENST00000393454 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
TDP1-203ENST00000393454 V9GYY9 64 aa4.37□□□□□ -1.71
TDP1-203ENST00000393454 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
TDP1-203ENST00000393454 SPTSSBQ8NFR3 76 aa4.36□□□□□ -1.71
TDP1-203ENST00000393454 H1FX-AS1Q4G0G2 97 aa4.36□□□□□ -1.71
TDP1-203ENST00000393454 PSPHP1O15172 72 aa4.35□□□□□ -1.71
TDP1-203ENST00000393454 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
TDP1-203ENST00000393454 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
TDP1-203ENST00000393454 S4R3F8 94 aa4.33□□□□□ -1.72
TDP1-203ENST00000393454 LCA10Q71F78 164 aa4.32□□□□□ -1.72
TDP1-203ENST00000393454 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
TDP1-203ENST00000393454 A0A1B0GU69 56 aa4.29□□□□□ -1.72
TDP1-203ENST00000393454 UBR4Q5T4S7 5183 aa4.28□□□□□ -1.72
TDP1-203ENST00000393454 Q5VV11 94 aa4.28□□□□□ -1.72
TDP1-203ENST00000393454 SEC61GP60059 68 aa4.27□□□□□ -1.73
TDP1-203ENST00000393454 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
TDP1-203ENST00000393454 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
TDP1-203ENST00000393454 CSAG1Q6PB30 78 aa4.23□□□□□ -1.73
TDP1-203ENST00000393454 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
TDP1-203ENST00000393454 MUC2Q02817 5179 aa4.22□□□□□ -1.73
TDP1-203ENST00000393454 A6NED7 52 aa4.22□□□□□ -1.73
TDP1-203ENST00000393454 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
TDP1-203ENST00000393454 RNF213Q63HN8 5207 aa4.18□□□□□ -1.74
TDP1-203ENST00000393454 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
TDP1-203ENST00000393454 KRTAP9-8Q9BYQ0 159 aa4.17□□□□□ -1.74
TDP1-203ENST00000393454 UQCR11O14957 56 aa4.15□□□□□ -1.74
TDP1-203ENST00000393454 ADM2Q7Z4H4 148 aa4.15□□□□□ -1.74
TDP1-203ENST00000393454 A0A1B0GU33 70 aa4.15□□□□□ -1.75
TDP1-203ENST00000393454 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
TDP1-203ENST00000393454 FLGP20930 4061 aaPredicted RBP4.14□□□□□ -1.75
TDP1-203ENST00000393454 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
TDP1-203ENST00000393454 P0C880 135 aa4.12□□□□□ -1.75
TDP1-203ENST00000393454 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
TDP1-203ENST00000393454 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
TDP1-203ENST00000393454 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
TDP1-203ENST00000393454 A8MU10 97 aa4.1□□□□□ -1.75
TDP1-203ENST00000393454 H0YAA0 97 aa4.09□□□□□ -1.75
TDP1-203ENST00000393454 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
TDP1-203ENST00000393454 M0R2T5 61 aa4.09□□□□□ -1.76
TDP1-203ENST00000393454 SPATA8Q6RVD6 105 aa4.09□□□□□ -1.76
TDP1-203ENST00000393454 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
TDP1-203ENST00000393454 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
TDP1-203ENST00000393454 FAT4Q6V0I7 4981 aa4.06□□□□□ -1.76
TDP1-203ENST00000393454 MT1HP80294 61 aa4.06□□□□□ -1.76
TDP1-203ENST00000393454 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
TDP1-203ENST00000393454 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
TDP1-203ENST00000393454 A0A0D9SG42 100 aa4.01□□□□□ -1.77
TDP1-203ENST00000393454 M0QZ58 72 aa4.01□□□□□ -1.77
TDP1-203ENST00000393454 R4GN34 69 aa4.01□□□□□ -1.77
TDP1-203ENST00000393454 LINC01554Q52M75 96 aa3.96□□□□□ -1.77
TDP1-203ENST00000393454 PMAIP1Q13794 54 aa3.96□□□□□ -1.78
TDP1-203ENST00000393454 K7ERS5 55 aa3.94□□□□□ -1.78
TDP1-203ENST00000393454 CRIPTQ9P021 101 aa3.93□□□□□ -1.78
TDP1-203ENST00000393454 KRTAP10-10P60014 251 aa3.91□□□□□ -1.78
TDP1-203ENST00000393454 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
TDP1-203ENST00000393454 MT2AP02795 61 aa3.91□□□□□ -1.78
TDP1-203ENST00000393454 A6NN06 94 aa3.9□□□□□ -1.79
TDP1-203ENST00000393454 MT1FP04733 61 aa3.89□□□□□ -1.79
TDP1-203ENST00000393454 KRTAP12-2P59991 146 aa3.88□□□□□ -1.79
TDP1-203ENST00000393454 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
TDP1-203ENST00000393454 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
TDP1-203ENST00000393454 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
TDP1-203ENST00000393454 KRTAP19-1Q8IUB9 90 aa3.82□□□□□ -1.8
TDP1-203ENST00000393454 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
TDP1-203ENST00000393454 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
TDP1-203ENST00000393454 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
TDP1-203ENST00000393454 ROMO1P60602 79 aa3.77□□□□□ -1.81
TDP1-203ENST00000393454 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
TDP1-203ENST00000393454 KRTAP9-3Q9BYQ3 159 aa3.76□□□□□ -1.81
TDP1-203ENST00000393454 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
TDP1-203ENST00000393454 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
TDP1-203ENST00000393454 MT1BP07438 61 aa3.67□□□□□ -1.82
TDP1-203ENST00000393454 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
TDP1-203ENST00000393454 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
TDP1-203ENST00000393454 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
TDP1-203ENST00000393454 TNP1P09430 55 aa3.57□□□□□ -1.84
TDP1-203ENST00000393454 MT1XP80297 61 aa3.56□□□□□ -1.84
TDP1-203ENST00000393454 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
TDP1-203ENST00000393454 CRCT1Q9UGL9 99 aa3.55□□□□□ -1.84
TDP1-203ENST00000393454 PRO2289Q9P1D8 64 aa3.55□□□□□ -1.84
TDP1-203ENST00000393454 USH2AO75445 5202 aa3.53□□□□□ -1.84
TDP1-203ENST00000393454 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
TDP1-203ENST00000393454 KRTAP10-7P60409 375 aaPredicted RBP3.44□□□□□ -1.86
TDP1-203ENST00000393454 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
TDP1-203ENST00000393454 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
TDP1-203ENST00000393454 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
TDP1-203ENST00000393454 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
TDP1-203ENST00000393454 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
TDP1-203ENST00000393454 KRTAP15-1Q3LI76 137 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms