RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 KRTAP3-3Q9BYR6 98 aa8.82□□□□□ -1
PTPA-207ENST00000393370 S4R3F8 94 aa8.82□□□□□ -1
PTPA-207ENST00000393370 RPS29P62273 56 aaKnown RBP8.79□□□□□ -1
PTPA-207ENST00000393370 KRTAP12-2P59991 146 aa8.79□□□□□ -1
PTPA-207ENST00000393370 FAT2Q9NYQ8 4349 aa8.77□□□□□ -1
PTPA-207ENST00000393370 RYR3Q15413 4870 aa8.74□□□□□ -1.01
PTPA-207ENST00000393370 RYR2Q92736 4967 aa8.72□□□□□ -1.01
PTPA-207ENST00000393370 PKD1P98161 4303 aa8.71□□□□□ -1.01
PTPA-207ENST00000393370 XP32Q5T750 250 aa8.66□□□□□ -1.02
PTPA-207ENST00000393370 PKHD1P08F94 4074 aa8.66□□□□□ -1.02
PTPA-207ENST00000393370 KRTAP12-1P59990 96 aa8.64□□□□□ -1.03
PTPA-207ENST00000393370 LUZP6Q538Z0 58 aa8.6□□□□□ -1.03
PTPA-207ENST00000393370 KRTAP10-8P60410 259 aa8.51□□□□□ -1.05
PTPA-207ENST00000393370 PKHD1L1Q86WI1 4243 aa8.5□□□□□ -1.05
PTPA-207ENST00000393370 EPPK1P58107 5090 aaKnown RBP8.47□□□□□ -1.05
PTPA-207ENST00000393370 SMR3BP02814 79 aaPredicted RBP8.43□□□□□ -1.06
PTPA-207ENST00000393370 DYNC1H1Q14204 4646 aaKnown RBP8.42□□□□□ -1.06
PTPA-207ENST00000393370 PLAC4Q8WY50 150 aa8.41□□□□□ -1.06
PTPA-207ENST00000393370 A0A1B0GVY2 172 aa8.38□□□□□ -1.07
PTPA-207ENST00000393370 KIAA1109Q2LD37 5005 aa8.34□□□□□ -1.07
PTPA-207ENST00000393370 FAT1Q14517 4588 aa8.34□□□□□ -1.07
PTPA-207ENST00000393370 HSPG2P98160 4391 aa8.33□□□□□ -1.08
PTPA-207ENST00000393370 M0QZ58 72 aa8.31□□□□□ -1.08
PTPA-207ENST00000393370 APOBP04114 4563 aaKnown RBP8.29□□□□□ -1.08
PTPA-207ENST00000393370 LRP1Q07954 4544 aaKnown RBP8.29□□□□□ -1.08
PTPA-207ENST00000393370 KRTAP10-4P60372 401 aaPredicted RBP8.23□□□□□ -1.09
PTPA-207ENST00000393370 FAT3Q8TDW7 4589 aa8.21□□□□□ -1.09
PTPA-207ENST00000393370 RYR1P21817 5038 aa8.17□□□□□ -1.1
PTPA-207ENST00000393370 MYCBP2O75592 4640 aa8.16□□□□□ -1.1
PTPA-207ENST00000393370 KRTAP17-1Q9BYP8 105 aa8.14□□□□□ -1.11
PTPA-207ENST00000393370 TNXBP22105 4242 aa8.12□□□□□ -1.11
PTPA-207ENST00000393370 LPAP08519 4548 aa8.06□□□□□ -1.12
PTPA-207ENST00000393370 Q5VSD8 79 aa8.02□□□□□ -1.12
PTPA-207ENST00000393370 R4GN34 69 aa8.02□□□□□ -1.12
PTPA-207ENST00000393370 BIRC6Q9NR09 4857 aa8.02□□□□□ -1.12
PTPA-207ENST00000393370 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
PTPA-207ENST00000393370 ABCA13Q86UQ4 5058 aa7.95□□□□□ -1.14
PTPA-207ENST00000393370 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
PTPA-207ENST00000393370 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
PTPA-207ENST00000393370 HERC2O95714 4834 aa7.88□□□□□ -1.15
PTPA-207ENST00000393370 PCLOQ9Y6V0 5065 aa7.85□□□□□ -1.15
PTPA-207ENST00000393370 SEC61BP60468 96 aaKnown RBP7.81□□□□□ -1.16
PTPA-207ENST00000393370 LRP2P98164 4655 aa7.78□□□□□ -1.16
PTPA-207ENST00000393370 CAMK2N1Q7Z7J9 78 aa7.71□□□□□ -1.18
PTPA-207ENST00000393370 SPRR5A0A1B0GTR4 108 aa7.68□□□□□ -1.18
PTPA-207ENST00000393370 MT1HL1P0DM35 61 aa7.65□□□□□ -1.18
PTPA-207ENST00000393370 HERC1Q15751 4861 aa7.64□□□□□ -1.19
PTPA-207ENST00000393370 J3QL48 77 aa7.59□□□□□ -1.19
PTPA-207ENST00000393370 PRO2289Q9P1D8 64 aa7.52□□□□□ -1.21
PTPA-207ENST00000393370 TNP1P09430 55 aa7.47□□□□□ -1.21
PTPA-207ENST00000393370 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
PTPA-207ENST00000393370 MUC17Q685J3 4493 aa7.36□□□□□ -1.23
PTPA-207ENST00000393370 MUC2Q02817 5179 aa7.3□□□□□ -1.24
PTPA-207ENST00000393370 HMCN2Q8NDA2 5059 aa7.3□□□□□ -1.24
PTPA-207ENST00000393370 KRTAP4-1Q9BYQ7 146 aa7.28□□□□□ -1.24
PTPA-207ENST00000393370 INE1O15225 51 aa7.26□□□□□ -1.25
PTPA-207ENST00000393370 UBR4Q5T4S7 5183 aa7.26□□□□□ -1.25
PTPA-207ENST00000393370 RNF213Q63HN8 5207 aa7.23□□□□□ -1.25
PTPA-207ENST00000393370 KRTAP19-2Q3LHN2 52 aa7.19□□□□□ -1.26
PTPA-207ENST00000393370 LCE3AQ5TA76 89 aa7.06□□□□□ -1.28
PTPA-207ENST00000393370 FAT4Q6V0I7 4981 aa6.95□□□□□ -1.3
PTPA-207ENST00000393370 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
PTPA-207ENST00000393370 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
PTPA-207ENST00000393370 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
PTPA-207ENST00000393370 KRTAP19-1Q8IUB9 90 aa6.77□□□□□ -1.33
PTPA-207ENST00000393370 KRTAP10-12P60413 245 aa6.7□□□□□ -1.34
PTPA-207ENST00000393370 KRTAP12-3P60328 96 aa6.65□□□□□ -1.34
PTPA-207ENST00000393370 LCE2CQ5TA81 110 aa6.58□□□□□ -1.36
PTPA-207ENST00000393370 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
PTPA-207ENST00000393370 M0R2T5 61 aa6.51□□□□□ -1.37
PTPA-207ENST00000393370 MT1HP80294 61 aa6.47□□□□□ -1.37
PTPA-207ENST00000393370 KRTAP10-5P60370 271 aa6.46□□□□□ -1.38
PTPA-207ENST00000393370 MT1XP80297 61 aa6.43□□□□□ -1.38
PTPA-207ENST00000393370 MT1FP04733 61 aa6.38□□□□□ -1.39
PTPA-207ENST00000393370 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
PTPA-207ENST00000393370 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
PTPA-207ENST00000393370 MT2AP02795 61 aa6.32□□□□□ -1.4
PTPA-207ENST00000393370 MT1BP07438 61 aa6.31□□□□□ -1.4
PTPA-207ENST00000393370 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
PTPA-207ENST00000393370 LCE2AQ5TA79 106 aaPredicted RBP6.3□□□□□ -1.4
PTPA-207ENST00000393370 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
PTPA-207ENST00000393370 KRTAP9-6A8MVA2 160 aa6.23□□□□□ -1.41
PTPA-207ENST00000393370 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
PTPA-207ENST00000393370 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
PTPA-207ENST00000393370 KRTAP2-3P0C7H8 128 aa6.16□□□□□ -1.42
PTPA-207ENST00000393370 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
PTPA-207ENST00000393370 KRTAP2-1Q9BYU5 128 aa6.16□□□□□ -1.42
PTPA-207ENST00000393370 USH2AO75445 5202 aa6.16□□□□□ -1.42
PTPA-207ENST00000393370 KMT2DO14686 5537 aa5.97□□□□□ -1.45
PTPA-207ENST00000393370 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.46
PTPA-207ENST00000393370 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
PTPA-207ENST00000393370 LCE2BO14633 110 aa5.9□□□□□ -1.46
PTPA-207ENST00000393370 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
PTPA-207ENST00000393370 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
PTPA-207ENST00000393370 KRTAP9-2Q9BYQ4 174 aa5.85□□□□□ -1.47
PTPA-207ENST00000393370 SSPOA2VEC9 5147 aa5.83□□□□□ -1.48
PTPA-207ENST00000393370 KRTAP19-7Q3SYF9 63 aa5.73□□□□□ -1.49
PTPA-207ENST00000393370 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
PTPA-207ENST00000393370 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
PTPA-207ENST00000393370 MT1LQ93083 61 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms