RNA–Protein interactions for RNA: ENST00000392645.6

ATXN2-204, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-204ENST00000392645 KRTAP3-1Q9BYR8 98 aa7.66□□□□□ -1.18
ATXN2-204ENST00000392645 RPS29P62273 56 aaKnown RBP7.65□□□□□ -1.18
ATXN2-204ENST00000392645 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.18
ATXN2-204ENST00000392645 KRTAP10-8P60410 259 aa7.63□□□□□ -1.19
ATXN2-204ENST00000392645 MT1HL1P0DM35 61 aa7.55□□□□□ -1.2
ATXN2-204ENST00000392645 MUC2Q02817 5179 aa7.55□□□□□ -1.2
ATXN2-204ENST00000392645 LINC01554Q52M75 96 aa7.55□□□□□ -1.2
ATXN2-204ENST00000392645 XP32Q5T750 250 aa7.54□□□□□ -1.2
ATXN2-204ENST00000392645 HERC2O95714 4834 aa7.47□□□□□ -1.21
ATXN2-204ENST00000392645 MIR22HGQ0VDD5 57 aa7.46□□□□□ -1.22
ATXN2-204ENST00000392645 SPATA8Q6RVD6 105 aa7.45□□□□□ -1.22
ATXN2-204ENST00000392645 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
ATXN2-204ENST00000392645 UQCR11O14957 56 aa7.42□□□□□ -1.22
ATXN2-204ENST00000392645 COX6B2Q6YFQ2 88 aa7.42□□□□□ -1.22
ATXN2-204ENST00000392645 CSAG1Q6PB30 78 aa7.4□□□□□ -1.22
ATXN2-204ENST00000392645 HERC1Q15751 4861 aa7.36□□□□□ -1.23
ATXN2-204ENST00000392645 H0YAA0 97 aa7.34□□□□□ -1.23
ATXN2-204ENST00000392645 A0A0A0MQY5 61 aa7.34□□□□□ -1.23
ATXN2-204ENST00000392645 A0A0D9SG42 100 aa7.3□□□□□ -1.24
ATXN2-204ENST00000392645 A0A1B0GU33 70 aa7.3□□□□□ -1.24
ATXN2-204ENST00000392645 KRTAP3-3Q9BYR6 98 aa7.3□□□□□ -1.24
ATXN2-204ENST00000392645 PCLOQ9Y6V0 5065 aa7.3□□□□□ -1.24
ATXN2-204ENST00000392645 J3QL48 77 aa7.27□□□□□ -1.25
ATXN2-204ENST00000392645 S4R3F8 94 aa7.25□□□□□ -1.25
ATXN2-204ENST00000392645 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
ATXN2-204ENST00000392645 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
ATXN2-204ENST00000392645 P0C880 135 aa7.23□□□□□ -1.25
ATXN2-204ENST00000392645 KRTAP13-4Q3LI77 160 aa7.21□□□□□ -1.25
ATXN2-204ENST00000392645 RNF213Q63HN8 5207 aa7.17□□□□□ -1.26
ATXN2-204ENST00000392645 KRTAP10-6P60371 365 aaPredicted RBP7.16□□□□□ -1.26
ATXN2-204ENST00000392645 TPRXLQ17RH7 258 aa7.15□□□□□ -1.26
ATXN2-204ENST00000392645 KRTAP4-1Q9BYQ7 146 aa7.14□□□□□ -1.27
ATXN2-204ENST00000392645 BIRC6Q9NR09 4857 aa7.13□□□□□ -1.27
ATXN2-204ENST00000392645 KRTAP3-2Q9BYR7 98 aa7.12□□□□□ -1.27
ATXN2-204ENST00000392645 FAT4Q6V0I7 4981 aa7.12□□□□□ -1.27
ATXN2-204ENST00000392645 MUC17Q685J3 4493 aa7.12□□□□□ -1.27
ATXN2-204ENST00000392645 ROMO1P60602 79 aa7.07□□□□□ -1.28
ATXN2-204ENST00000392645 UBR4Q5T4S7 5183 aa7.01□□□□□ -1.29
ATXN2-204ENST00000392645 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
ATXN2-204ENST00000392645 KRTAP25-1Q3LHN0 102 aa6.98□□□□□ -1.29
ATXN2-204ENST00000392645 HMCN2Q8NDA2 5059 aa6.93□□□□□ -1.3
ATXN2-204ENST00000392645 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
ATXN2-204ENST00000392645 KRTAP12-2P59991 146 aa6.93□□□□□ -1.3
ATXN2-204ENST00000392645 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
ATXN2-204ENST00000392645 K7ERS5 55 aa6.9□□□□□ -1.31
ATXN2-204ENST00000392645 C10orf95Q9H7T3 257 aa6.87□□□□□ -1.31
ATXN2-204ENST00000392645 M0QZ58 72 aa6.86□□□□□ -1.31
ATXN2-204ENST00000392645 R4GN34 69 aa6.8□□□□□ -1.32
ATXN2-204ENST00000392645 KRTAP12-1P59990 96 aa6.79□□□□□ -1.32
ATXN2-204ENST00000392645 NDUFAF8A1L188 74 aa6.77□□□□□ -1.33
ATXN2-204ENST00000392645 KRTAP19-2Q3LHN2 52 aa6.74□□□□□ -1.33
ATXN2-204ENST00000392645 FLGP20930 4061 aaPredicted RBP6.74□□□□□ -1.33
ATXN2-204ENST00000392645 M0R2T5 61 aa6.58□□□□□ -1.36
ATXN2-204ENST00000392645 KRTAP15-1Q3LI76 137 aa6.49□□□□□ -1.37
ATXN2-204ENST00000392645 LCE2CQ5TA81 110 aa6.49□□□□□ -1.37
ATXN2-204ENST00000392645 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
ATXN2-204ENST00000392645 MT1HP80294 61 aa6.35□□□□□ -1.39
ATXN2-204ENST00000392645 USH2AO75445 5202 aa6.35□□□□□ -1.39
ATXN2-204ENST00000392645 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
ATXN2-204ENST00000392645 LUZP6Q538Z0 58 aa6.27□□□□□ -1.41
ATXN2-204ENST00000392645 MT1FP04733 61 aa6.26□□□□□ -1.41
ATXN2-204ENST00000392645 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
ATXN2-204ENST00000392645 MT2AP02795 61 aa6.21□□□□□ -1.42
ATXN2-204ENST00000392645 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
ATXN2-204ENST00000392645 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
ATXN2-204ENST00000392645 PLAC4Q8WY50 150 aa6.12□□□□□ -1.43
ATXN2-204ENST00000392645 KMT2DO14686 5537 aa6.12□□□□□ -1.43
ATXN2-204ENST00000392645 SPRR2GQ9BYE4 73 aa6.07□□□□□ -1.44
ATXN2-204ENST00000392645 TNP1P09430 55 aa6.03□□□□□ -1.44
ATXN2-204ENST00000392645 MT1BP07438 61 aa5.92□□□□□ -1.46
ATXN2-204ENST00000392645 LCE3AQ5TA76 89 aa5.9□□□□□ -1.46
ATXN2-204ENST00000392645 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
ATXN2-204ENST00000392645 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
ATXN2-204ENST00000392645 KRTAP10-5P60370 271 aa5.84□□□□□ -1.47
ATXN2-204ENST00000392645 MT1XP80297 61 aa5.84□□□□□ -1.47
ATXN2-204ENST00000392645 LCE2BO14633 110 aa5.8□□□□□ -1.48
ATXN2-204ENST00000392645 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
ATXN2-204ENST00000392645 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
ATXN2-204ENST00000392645 LCE2DQ5TA82 110 aaPredicted RBP5.8□□□□□ -1.48
ATXN2-204ENST00000392645 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
ATXN2-204ENST00000392645 LCE2AQ5TA79 106 aaPredicted RBP5.67□□□□□ -1.5
ATXN2-204ENST00000392645 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
ATXN2-204ENST00000392645 SSPOA2VEC9 5147 aa5.65□□□□□ -1.51
ATXN2-204ENST00000392645 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
ATXN2-204ENST00000392645 KRTAP4-8Q9BYQ9 185 aa5.62□□□□□ -1.51
ATXN2-204ENST00000392645 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
ATXN2-204ENST00000392645 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
ATXN2-204ENST00000392645 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
ATXN2-204ENST00000392645 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
ATXN2-204ENST00000392645 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
ATXN2-204ENST00000392645 MUC12Q9UKN1 5478 aa5.42□□□□□ -1.54
ATXN2-204ENST00000392645 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
ATXN2-204ENST00000392645 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
ATXN2-204ENST00000392645 DSTQ03001 7570 aaKnown RBP5.35□□□□□ -1.55
ATXN2-204ENST00000392645 KRTAP19-7Q3SYF9 63 aa5.2□□□□□ -1.58
ATXN2-204ENST00000392645 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
ATXN2-204ENST00000392645 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
ATXN2-204ENST00000392645 MACF1Q9UPN3 7388 aaKnown RBP5.14□□□□□ -1.59
ATXN2-204ENST00000392645 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
ATXN2-204ENST00000392645 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms