RNA–Protein interactions for RNA: ENST00000392645.6

ATXN2-204, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-204ENST00000392645 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.88■□□□□ 0.292e-15■■□□□ 11.7
ATXN2-204ENST00000392645 PCBP2Q15366 365 aaKnown RBP eCLIP14.03□□□□□ -0.164e-14■■■■■ 36.9
ATXN2-204ENST00000392645 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.43□□□□□ -0.18e-13■■■■□ 20.6
ATXN2-204ENST00000392645 RBM22Q9NW64 420 aaKnown RBP eCLIP14.67□□□□□ -0.066e-11■■■■■ 45.7
ATXN2-204ENST00000392645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.87■□□□□ 0.771e-10■■■■□ 20.6
ATXN2-204ENST00000392645 MATR3P43243 847 aaKnown RBP eCLIP15.98■□□□□ 0.151e-10■■■■■ 41.7
ATXN2-204ENST00000392645 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.9□□□□□ -0.027e-10■□□□□ 10.9
ATXN2-204ENST00000392645 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.49■□□□□ 0.072e-9■■■□□ 14.6
ATXN2-204ENST00000392645 FUSP35637 526 aaKnown RBP eCLIP9.45□□□□□ -0.94e-9■□□□□ 9.7
ATXN2-204ENST00000392645 PRPF4O43172 522 aaKnown RBP eCLIP14.79□□□□□ -0.046e-9■■□□□ 12.3
ATXN2-204ENST00000392645 TIA1P31483 386 aaKnown RBP eCLIP13.79□□□□□ -0.29e-9■□□□□ 9.3
ATXN2-204ENST00000392645 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.93□□□□□ -0.022e-8■■□□□ 11.4
ATXN2-204ENST00000392645 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.91□□□□□ -0.183e-8■■□□□ 13.6
ATXN2-204ENST00000392645 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.12■□□□□ 0.013e-8■■□□□ 11.4
ATXN2-204ENST00000392645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.05■□□□□ 0.164e-8■■■■■ 61
ATXN2-204ENST00000392645 EFTUD2Q15029 972 aaKnown RBP eCLIP15.18■□□□□ 0.027e-8■■□□□ 13.5
ATXN2-204ENST00000392645 NONOQ15233 471 aaKnown RBP eCLIP16.23■□□□□ 0.198e-8■■■■□ 24.4
ATXN2-204ENST00000392645 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.48□□□□□ -0.091e-7■■■■■ 26.9
ATXN2-204ENST00000392645 PTBP1P26599 531 aaKnown RBP eCLIP12.75□□□□□ -0.372e-7■■■■■ 35.1
ATXN2-204ENST00000392645 EWSR1Q01844 656 aaKnown RBP eCLIP12.14□□□□□ -0.472e-7■■■■□ 20.4
ATXN2-204ENST00000392645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.29■□□□□ 0.363e-7■■■□□ 15.7
ATXN2-204ENST00000392645 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.74□□□□□ -0.213e-7■■■■□ 24.2
ATXN2-204ENST00000392645 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.33□□□□□ -0.433e-7■■■■■ 31.4
ATXN2-204ENST00000392645 QKIQ96PU8 341 aaKnown RBP eCLIP14.79□□□□□ -0.043e-7■■■■■ 29.4
ATXN2-204ENST00000392645 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.73□□□□□ -0.533e-7■■■■■ 26.8
ATXN2-204ENST00000392645 KHSRPQ92945 711 aaKnown RBP eCLIP15.04■□□□□ -04e-7■■■□□ 15.8
ATXN2-204ENST00000392645 CDC40O60508 579 aaKnown RBP eCLIP13.21□□□□□ -0.294e-7■□□□□ 10.6
ATXN2-204ENST00000392645 ZNF622Q969S3 477 aaKnown RBP eCLIP16.45■□□□□ 0.224e-7■■□□□ 12
ATXN2-204ENST00000392645 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.995e-7■■■■■ 30.6
ATXN2-204ENST00000392645 NKRFO15226 690 aaKnown RBP eCLIP16.33■□□□□ 0.25e-7■■□□□ 11.6
ATXN2-204ENST00000392645 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.69□□□□□ -0.385e-7■■■□□ 15.7
ATXN2-204ENST00000392645 RBFOX2O43251 390 aaKnown RBP eCLIP11.64□□□□□ -0.555e-7■□□□□ 8.4
ATXN2-204ENST00000392645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.46■□□□□ 0.237e-7■■□□□ 12.8
ATXN2-204ENST00000392645 HNRNPCP07910 306 aaKnown RBP eCLIP13.52□□□□□ -0.247e-7■■■■□ 24.6
ATXN2-204ENST00000392645 FXR2P51116 673 aaKnown RBP eCLIP15.99■□□□□ 0.157e-7■□□□□ 9.9
ATXN2-204ENST00000392645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.847e-7■□□□□ 10.8
ATXN2-204ENST00000392645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.44■□□□□ 0.867e-7■■■□□ 17.2
ATXN2-204ENST00000392645 SUB1P53999 127 aaKnown RBP eCLIP11.44□□□□□ -0.588e-7■■■■□ 25.4
ATXN2-204ENST00000392645 GTF2F1P35269 517 aaKnown RBP eCLIP16.18■□□□□ 0.189e-7■■■■□ 20.5
ATXN2-204ENST00000392645 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.01□□□□□ -0.019e-7■■■□□ 14.9
ATXN2-204ENST00000392645 SF3B4Q15427 424 aaKnown RBP eCLIP13.12□□□□□ -0.319e-7■■■□□ 17.9
ATXN2-204ENST00000392645 ILF3Q12906 894 aaKnown RBP eCLIP13.46□□□□□ -0.259e-7■■■■□ 19.9
ATXN2-204ENST00000392645 TARDBPQ13148 414 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■■■ 42.4
ATXN2-204ENST00000392645 CSTF2P33240 577 aaKnown RBP eCLIP13.35□□□□□ -0.271e-6■■■□□ 18.7
ATXN2-204ENST00000392645 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.15■□□□□ 0.021e-6■■■□□ 16.3
ATXN2-204ENST00000392645 SFPQP23246 707 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■□□□□ 10.6
ATXN2-204ENST00000392645 RBM5P52756 815 aaKnown RBP eCLIP16.41■□□□□ 0.221e-6■■□□□ 13.4
ATXN2-204ENST00000392645 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.47□□□□□ -0.091e-6■■□□□ 11.8
ATXN2-204ENST00000392645 EIF3HO15372 352 aaKnown RBP eCLIP15.28■□□□□ 0.041e-6■■■□□ 15.9
ATXN2-204ENST00000392645 DKC1O60832 514 aaKnown RBP eCLIP15.31■□□□□ 0.041e-6■■□□□ 12.2
ATXN2-204ENST00000392645 HNRNPMP52272 730 aaKnown RBP eCLIP20.41■□□□□ 0.862e-6■■■■□ 21
ATXN2-204ENST00000392645 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.11■□□□□ 0.172e-6■■□□□ 13.2
ATXN2-204ENST00000392645 NCBP2P52298 156 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■■■■□ 22.6
ATXN2-204ENST00000392645 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■■□□ 15.9
ATXN2-204ENST00000392645 SF3B1O75533 1304 aaKnown RBP eCLIP14.52□□□□□ -0.082e-6■■■■■ 114.5
ATXN2-204ENST00000392645 XRCC6P12956 609 aaKnown RBP eCLIP17.51■□□□□ 0.392e-6■□□□□ 10.4
ATXN2-204ENST00000392645 AARSP49588 968 aaKnown RBP eCLIP15.41■□□□□ 0.063e-6■■■■■ 61.8
ATXN2-204ENST00000392645 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.75□□□□□ -0.213e-6■□□□□ 9.6
ATXN2-204ENST00000392645 U2AF2P26368 475 aaKnown RBP eCLIP16.54■□□□□ 0.244e-6■■■□□ 14.7
ATXN2-204ENST00000392645 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.94■□□□□ 0.144e-6■□□□□ 8.1
ATXN2-204ENST00000392645 SRSF1Q07955 248 aaKnown RBP eCLIP11.06□□□□□ -0.646e-6■■□□□ 12.1
ATXN2-204ENST00000392645 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.12□□□□□ -0.158e-6■■□□□ 11.8
ATXN2-204ENST00000392645 HNRNPLP14866 589 aaKnown RBP eCLIP14.61□□□□□ -0.079e-6■□□□□ 8.2
Retrieved 63 of 63 RNA–protein pairs in 35.6 ms