RNA–Protein interactions for RNA: ENST00000389506.9

KMT2A-201, Transcript of lysine methyltransferase 2A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KMT2A, Length 13,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KMT2A-201ENST00000389506 HECTD4Q9Y4D8 3996 aa4.7□□□□□ -1.66
KMT2A-201ENST00000389506 ZNF469Q96JG9 3925 aaPredicted RBP4.7□□□□□ -1.66
KMT2A-201ENST00000389506 KRTAP10-4P60372 401 aaPredicted RBP4.69□□□□□ -1.66
KMT2A-201ENST00000389506 CUBNO60494 3623 aa4.68□□□□□ -1.66
KMT2A-201ENST00000389506 ANK3Q12955 4377 aaKnown RBP4.66□□□□□ -1.66
KMT2A-201ENST00000389506 CMYA5Q8N3K9 4069 aa4.64□□□□□ -1.67
KMT2A-201ENST00000389506 LYSTQ99698 3801 aa4.64□□□□□ -1.67
KMT2A-201ENST00000389506 DNAH7Q8WXX0 4024 aa4.63□□□□□ -1.67
KMT2A-201ENST00000389506 DNAH11Q96DT5 4516 aa4.56□□□□□ -1.68
KMT2A-201ENST00000389506 KRTAP4-5Q9BYR2 181 aa4.56□□□□□ -1.68
KMT2A-201ENST00000389506 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
KMT2A-201ENST00000389506 ANK2Q01484 3957 aa4.54□□□□□ -1.68
KMT2A-201ENST00000389506 MUC3AQ02505 3323 aa4.53□□□□□ -1.68
KMT2A-201ENST00000389506 DNAH10Q8IVF4 4471 aa4.49□□□□□ -1.69
KMT2A-201ENST00000389506 DNAH6Q9C0G6 4158 aa4.47□□□□□ -1.69
KMT2A-201ENST00000389506 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
KMT2A-201ENST00000389506 KRTAP4-1Q9BYQ7 146 aa4.44□□□□□ -1.7
KMT2A-201ENST00000389506 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
KMT2A-201ENST00000389506 KRTAP8-1Q8IUC2 63 aa4.41□□□□□ -1.7
KMT2A-201ENST00000389506 CSMD2Q7Z408 3487 aa4.34□□□□□ -1.72
KMT2A-201ENST00000389506 VPS13DQ5THJ4 4388 aa4.28□□□□□ -1.72
KMT2A-201ENST00000389506 VPS13BQ7Z7G8 4022 aa4.27□□□□□ -1.73
KMT2A-201ENST00000389506 SPRR2GQ9BYE4 73 aa4.26□□□□□ -1.73
KMT2A-201ENST00000389506 KMT2AQ03164 3969 aa4.25□□□□□ -1.73
KMT2A-201ENST00000389506 MT2AP02795 61 aa4.25□□□□□ -1.73
KMT2A-201ENST00000389506 DNAH17Q9UFH2 4485 aa4.21□□□□□ -1.74
KMT2A-201ENST00000389506 MT1FP04733 61 aa4.21□□□□□ -1.74
KMT2A-201ENST00000389506 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
KMT2A-201ENST00000389506 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
KMT2A-201ENST00000389506 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
KMT2A-201ENST00000389506 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
KMT2A-201ENST00000389506 MT1HP80294 61 aa4.16□□□□□ -1.74
KMT2A-201ENST00000389506 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
KMT2A-201ENST00000389506 DNAH8Q96JB1 4490 aa4.14□□□□□ -1.75
KMT2A-201ENST00000389506 FRAS1Q86XX4 4008 aa4.1□□□□□ -1.75
KMT2A-201ENST00000389506 DNAH9Q9NYC9 4486 aa4.06□□□□□ -1.76
KMT2A-201ENST00000389506 DYNC2H1Q8NCM8 4307 aaKnown RBP4.06□□□□□ -1.76
KMT2A-201ENST00000389506 FLGP20930 4061 aaPredicted RBP4.06□□□□□ -1.76
KMT2A-201ENST00000389506 PRKDCP78527 4128 aaKnown RBP4.05□□□□□ -1.76
KMT2A-201ENST00000389506 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
KMT2A-201ENST00000389506 FAT2Q9NYQ8 4349 aa4.03□□□□□ -1.76
KMT2A-201ENST00000389506 DYNC1H1Q14204 4646 aaKnown RBP4.03□□□□□ -1.76
KMT2A-201ENST00000389506 DNAH5Q8TE73 4624 aa4.03□□□□□ -1.76
KMT2A-201ENST00000389506 MT1GP13640 62 aa4.02□□□□□ -1.77
KMT2A-201ENST00000389506 MT1XP80297 61 aa4.01□□□□□ -1.77
KMT2A-201ENST00000389506 PLECQ15149 4684 aaKnown RBP4□□□□□ -1.77
KMT2A-201ENST00000389506 FAT1Q14517 4588 aa3.99□□□□□ -1.77
KMT2A-201ENST00000389506 KRTAP19-1Q8IUB9 90 aa3.95□□□□□ -1.78
KMT2A-201ENST00000389506 PKHD1P08F94 4074 aa3.92□□□□□ -1.78
KMT2A-201ENST00000389506 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
KMT2A-201ENST00000389506 SACSQ9NZJ4 4579 aa3.86□□□□□ -1.79
KMT2A-201ENST00000389506 STARD9Q9P2P6 4700 aa3.85□□□□□ -1.79
KMT2A-201ENST00000389506 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
KMT2A-201ENST00000389506 APOBP04114 4563 aaKnown RBP3.85□□□□□ -1.79
KMT2A-201ENST00000389506 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
KMT2A-201ENST00000389506 PKD1P98161 4303 aa3.83□□□□□ -1.8
KMT2A-201ENST00000389506 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
KMT2A-201ENST00000389506 PRM1P04553 51 aa3.82□□□□□ -1.8
KMT2A-201ENST00000389506 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
KMT2A-201ENST00000389506 MT1BP07438 61 aa3.8□□□□□ -1.8
KMT2A-201ENST00000389506 KRTAP4-8A0A0G2JLE6 195 aa3.79□□□□□ -1.8
KMT2A-201ENST00000389506 KRTAP4-8Q9BYQ9 185 aa3.79□□□□□ -1.8
KMT2A-201ENST00000389506 LRP1BQ9NZR2 4599 aa3.78□□□□□ -1.8
KMT2A-201ENST00000389506 HSPG2P98160 4391 aa3.75□□□□□ -1.81
KMT2A-201ENST00000389506 PKHD1L1Q86WI1 4243 aa3.74□□□□□ -1.81
KMT2A-201ENST00000389506 KRTAP17-1Q9BYP8 105 aa3.73□□□□□ -1.81
KMT2A-201ENST00000389506 SPRR2EP22531 72 aa3.69□□□□□ -1.82
KMT2A-201ENST00000389506 SPRR2BP35325 72 aa3.69□□□□□ -1.82
KMT2A-201ENST00000389506 SPRR2AP35326 72 aa3.69□□□□□ -1.82
KMT2A-201ENST00000389506 MYCBP2O75592 4640 aa3.69□□□□□ -1.82
KMT2A-201ENST00000389506 MT1LQ93083 61 aa3.69□□□□□ -1.82
KMT2A-201ENST00000389506 LOC100996750A0A140TA64 210 aa3.66□□□□□ -1.82
KMT2A-201ENST00000389506 TNXBP22105 4242 aa3.65□□□□□ -1.82
KMT2A-201ENST00000389506 FAT3Q8TDW7 4589 aa3.63□□□□□ -1.83
KMT2A-201ENST00000389506 KRTAP9-8Q9BYQ0 159 aa3.59□□□□□ -1.83
KMT2A-201ENST00000389506 RYR3Q15413 4870 aa3.59□□□□□ -1.83
KMT2A-201ENST00000389506 KRTAP9-3Q9BYQ3 159 aa3.58□□□□□ -1.84
KMT2A-201ENST00000389506 MT1EP04732 61 aa3.57□□□□□ -1.84
KMT2A-201ENST00000389506 SPRR2DP22532 72 aa3.56□□□□□ -1.84
KMT2A-201ENST00000389506 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
KMT2A-201ENST00000389506 RYR1P21817 5038 aa3.55□□□□□ -1.84
KMT2A-201ENST00000389506 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
KMT2A-201ENST00000389506 LCE2BO14633 110 aa3.54□□□□□ -1.84
KMT2A-201ENST00000389506 LCE2CQ5TA81 110 aa3.52□□□□□ -1.85
KMT2A-201ENST00000389506 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
KMT2A-201ENST00000389506 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
KMT2A-201ENST00000389506 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
KMT2A-201ENST00000389506 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
KMT2A-201ENST00000389506 DNHD1Q96M86 4753 aa3.49□□□□□ -1.85
KMT2A-201ENST00000389506 MT1MQ8N339 61 aa3.47□□□□□ -1.85
KMT2A-201ENST00000389506 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
KMT2A-201ENST00000389506 KMT2CQ8NEZ4 4911 aaKnown RBP3.36□□□□□ -1.87
KMT2A-201ENST00000389506 KRTAP19-2Q3LHN2 52 aa3.36□□□□□ -1.87
KMT2A-201ENST00000389506 PCLOQ9Y6V0 5065 aa3.35□□□□□ -1.87
KMT2A-201ENST00000389506 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
KMT2A-201ENST00000389506 MT3P25713 68 aa3.32□□□□□ -1.88
KMT2A-201ENST00000389506 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
KMT2A-201ENST00000389506 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
KMT2A-201ENST00000389506 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
KMT2A-201ENST00000389506 KRTAP9-7A8MTY7 169 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms