RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 TPRXLQ17RH7 258 aa5.18□□□□□ -1.58
LTN1-203ENST00000389195 FAT4Q6V0I7 4981 aa5.18□□□□□ -1.58
LTN1-203ENST00000389195 COX6B2Q6YFQ2 88 aa5.17□□□□□ -1.58
LTN1-203ENST00000389195 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
LTN1-203ENST00000389195 KRTAP4-1Q9BYQ7 146 aa5.17□□□□□ -1.58
LTN1-203ENST00000389195 HMCN2Q8NDA2 5059 aa5.16□□□□□ -1.58
LTN1-203ENST00000389195 A0A1B0GU69 56 aa5.16□□□□□ -1.58
LTN1-203ENST00000389195 LCA10Q71F78 164 aa5.16□□□□□ -1.58
LTN1-203ENST00000389195 V9GYY9 64 aa5.16□□□□□ -1.58
LTN1-203ENST00000389195 SPTSSBQ8NFR3 76 aa5.12□□□□□ -1.59
LTN1-203ENST00000389195 KRTAP3-3Q9BYR6 98 aa5.12□□□□□ -1.59
LTN1-203ENST00000389195 PRO0628Q9UI54 55 aa5.08□□□□□ -1.6
LTN1-203ENST00000389195 SPATA8Q6RVD6 105 aa5.05□□□□□ -1.6
LTN1-203ENST00000389195 S4R3F8 94 aa5.05□□□□□ -1.6
LTN1-203ENST00000389195 SEC61GP60059 68 aa5.01□□□□□ -1.61
LTN1-203ENST00000389195 H1FX-AS1Q4G0G2 97 aa5.01□□□□□ -1.61
LTN1-203ENST00000389195 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
LTN1-203ENST00000389195 RBM12B-AS1Q9P1G2 102 aa5□□□□□ -1.61
LTN1-203ENST00000389195 P0C880 135 aa4.99□□□□□ -1.61
LTN1-203ENST00000389195 CDC42SE1Q9NRR8 79 aa4.98□□□□□ -1.61
LTN1-203ENST00000389195 H0YAA0 97 aa4.97□□□□□ -1.61
LTN1-203ENST00000389195 MIR22HGQ0VDD5 57 aa4.97□□□□□ -1.61
LTN1-203ENST00000389195 PMAIP1Q13794 54 aa4.97□□□□□ -1.61
LTN1-203ENST00000389195 UQCR11O14957 56 aa4.96□□□□□ -1.61
LTN1-203ENST00000389195 KRTAP10-6P60371 365 aaPredicted RBP4.96□□□□□ -1.62
LTN1-203ENST00000389195 A0A1B0GU33 70 aa4.95□□□□□ -1.62
LTN1-203ENST00000389195 KRTAP13-4Q3LI77 160 aa4.95□□□□□ -1.62
LTN1-203ENST00000389195 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
LTN1-203ENST00000389195 A0A0D9SG42 100 aa4.94□□□□□ -1.62
LTN1-203ENST00000389195 ADM2Q7Z4H4 148 aa4.94□□□□□ -1.62
LTN1-203ENST00000389195 KRTAP19-2Q3LHN2 52 aa4.91□□□□□ -1.62
LTN1-203ENST00000389195 CSAG1Q6PB30 78 aa4.88□□□□□ -1.63
LTN1-203ENST00000389195 FLGP20930 4061 aaPredicted RBP4.88□□□□□ -1.63
LTN1-203ENST00000389195 LORP23490 312 aaPredicted RBP4.87□□□□□ -1.63
LTN1-203ENST00000389195 A6NN06 94 aa4.84□□□□□ -1.63
LTN1-203ENST00000389195 LINC01554Q52M75 96 aa4.83□□□□□ -1.64
LTN1-203ENST00000389195 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
LTN1-203ENST00000389195 LCE2CQ5TA81 110 aa4.77□□□□□ -1.65
LTN1-203ENST00000389195 CRIPTQ9P021 101 aa4.77□□□□□ -1.65
LTN1-203ENST00000389195 SPINT4Q6UDR6 99 aa4.74□□□□□ -1.65
LTN1-203ENST00000389195 M0QZ58 72 aa4.74□□□□□ -1.65
LTN1-203ENST00000389195 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
LTN1-203ENST00000389195 M0R2T5 61 aa4.72□□□□□ -1.65
LTN1-203ENST00000389195 R4GN34 69 aa4.71□□□□□ -1.66
LTN1-203ENST00000389195 LCE2DQ5TA82 110 aaPredicted RBP4.7□□□□□ -1.66
LTN1-203ENST00000389195 KTN1-AS1Q86SY8 53 aa4.68□□□□□ -1.66
LTN1-203ENST00000389195 KRTAP12-1P59990 96 aa4.66□□□□□ -1.66
LTN1-203ENST00000389195 MT1HP80294 61 aa4.66□□□□□ -1.66
LTN1-203ENST00000389195 K7ERS5 55 aa4.6□□□□□ -1.67
LTN1-203ENST00000389195 USH2AO75445 5202 aa4.6□□□□□ -1.67
LTN1-203ENST00000389195 C10orf95Q9H7T3 257 aa4.57□□□□□ -1.68
LTN1-203ENST00000389195 MT1FP04733 61 aa4.54□□□□□ -1.68
LTN1-203ENST00000389195 KRTAP10-10P60014 251 aa4.52□□□□□ -1.69
LTN1-203ENST00000389195 FSIP2Q5CZC0 6907 aa4.51□□□□□ -1.69
LTN1-203ENST00000389195 ROMO1P60602 79 aa4.51□□□□□ -1.69
LTN1-203ENST00000389195 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
LTN1-203ENST00000389195 MT2AP02795 61 aa4.51□□□□□ -1.69
LTN1-203ENST00000389195 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
LTN1-203ENST00000389195 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
LTN1-203ENST00000389195 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
LTN1-203ENST00000389195 SPRR2GQ9BYE4 73 aa4.37□□□□□ -1.71
LTN1-203ENST00000389195 KMT2DO14686 5537 aa4.34□□□□□ -1.71
LTN1-203ENST00000389195 LCE2AQ5TA79 106 aaPredicted RBP4.31□□□□□ -1.72
LTN1-203ENST00000389195 KRTAP9-3Q9BYQ3 159 aa4.31□□□□□ -1.72
LTN1-203ENST00000389195 PLAC4Q8WY50 150 aa4.3□□□□□ -1.72
LTN1-203ENST00000389195 MT1BP07438 61 aa4.28□□□□□ -1.72
LTN1-203ENST00000389195 LCE2BO14633 110 aa4.27□□□□□ -1.73
LTN1-203ENST00000389195 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
LTN1-203ENST00000389195 KRTAP10-5P60370 271 aa4.18□□□□□ -1.74
LTN1-203ENST00000389195 MT1XP80297 61 aa4.18□□□□□ -1.74
LTN1-203ENST00000389195 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
LTN1-203ENST00000389195 TNP1P09430 55 aa4.15□□□□□ -1.74
LTN1-203ENST00000389195 KRTAP10-7P60409 375 aaPredicted RBP4.12□□□□□ -1.75
LTN1-203ENST00000389195 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
LTN1-203ENST00000389195 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
LTN1-203ENST00000389195 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
LTN1-203ENST00000389195 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
LTN1-203ENST00000389195 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
LTN1-203ENST00000389195 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
LTN1-203ENST00000389195 PRO2289Q9P1D8 64 aa3.94□□□□□ -1.78
LTN1-203ENST00000389195 FCGBPQ9Y6R7 5405 aaPredicted RBP3.92□□□□□ -1.78
LTN1-203ENST00000389195 MUC12Q9UKN1 5478 aa3.88□□□□□ -1.79
LTN1-203ENST00000389195 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
LTN1-203ENST00000389195 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
LTN1-203ENST00000389195 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
LTN1-203ENST00000389195 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
LTN1-203ENST00000389195 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
LTN1-203ENST00000389195 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
LTN1-203ENST00000389195 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
LTN1-203ENST00000389195 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
LTN1-203ENST00000389195 KRTAP19-6Q3LI70 58 aa3.77□□□□□ -1.81
LTN1-203ENST00000389195 H3BS24 57 aa3.76□□□□□ -1.81
LTN1-203ENST00000389195 KRTAP4-7Q9BYR0 210 aa3.75□□□□□ -1.81
LTN1-203ENST00000389195 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
LTN1-203ENST00000389195 KRTAP9-2Q9BYQ4 174 aa3.72□□□□□ -1.81
LTN1-203ENST00000389195 MDN1Q9NU22 5596 aa3.65□□□□□ -1.82
LTN1-203ENST00000389195 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
LTN1-203ENST00000389195 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
LTN1-203ENST00000389195 MT1EP04732 61 aa3.61□□□□□ -1.83
LTN1-203ENST00000389195 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms