RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 FAM107BQ9H098 131 aa-6.34□□□□□ -3.42
SNORA40-201ENST00000388090 CLASP1Q7Z460 1538 aa-6.35□□□□□ -3.43
SNORA40-201ENST00000388090 LINC00643Q86TS7 51 aa-6.35□□□□□ -3.43
SNORA40-201ENST00000388090 MKI67P46013 3256 aaKnown RBP-6.35□□□□□ -3.43
SNORA40-201ENST00000388090 GYPAP02724 150 aa-6.4□□□□□ -3.43
SNORA40-201ENST00000388090 SNRPFP62306 86 aaKnown RBP-6.4□□□□□ -3.43
SNORA40-201ENST00000388090 KAAG1Q9UBP8 84 aa-6.4□□□□□ -3.43
SNORA40-201ENST00000388090 C20orf202A1L168 122 aa-6.41□□□□□ -3.44
SNORA40-201ENST00000388090 S100A8P05109 93 aa-6.41□□□□□ -3.44
SNORA40-201ENST00000388090 PVALEFA0A1B0GWK0 134 aa-6.42□□□□□ -3.44
SNORA40-201ENST00000388090 TTC37Q6PGP7 1564 aa-6.45□□□□□ -3.44
SNORA40-201ENST00000388090 ATP5EP2Q5VTU8 51 aa-6.46□□□□□ -3.44
SNORA40-201ENST00000388090 ABRACLQ9P1F3 81 aa-6.47□□□□□ -3.45
SNORA40-201ENST00000388090 CFAP47Q6ZTR5 3102 aa-6.48□□□□□ -3.45
SNORA40-201ENST00000388090 ABCC6O95255 1503 aa-6.5□□□□□ -3.45
SNORA40-201ENST00000388090 ENHOQ6UWT2 76 aa-6.51□□□□□ -3.45
SNORA40-201ENST00000388090 C2orf88Q9BSF0 95 aa-6.52□□□□□ -3.45
SNORA40-201ENST00000388090 KDM5DQ9BY66 1539 aa-6.52□□□□□ -3.45
SNORA40-201ENST00000388090 EIF2AK4Q9P2K8 1649 aaKnown RBP-6.53□□□□□ -3.45
SNORA40-201ENST00000388090 A0A087WXM4 84 aa-6.53□□□□□ -3.45
SNORA40-201ENST00000388090 EEA1Q15075 1411 aa-6.53□□□□□ -3.46
SNORA40-201ENST00000388090 S100A12P80511 92 aa-6.54□□□□□ -3.46
SNORA40-201ENST00000388090 MROH1Q8NDA8 1641 aa-6.55□□□□□ -3.46
SNORA40-201ENST00000388090 HMGN1P05114 100 aa-6.56□□□□□ -3.46
SNORA40-201ENST00000388090 SMIM13P0DJ93 91 aa-6.56□□□□□ -3.46
SNORA40-201ENST00000388090 GLI2P10070 1586 aa-6.58□□□□□ -3.46
SNORA40-201ENST00000388090 DIP2AQ14689 1571 aa-6.58□□□□□ -3.46
SNORA40-201ENST00000388090 USP34Q70CQ2 3546 aa-6.59□□□□□ -3.46
SNORA40-201ENST00000388090 RRBP1Q9P2E9 1410 aaKnown RBP-6.59□□□□□ -3.47
SNORA40-201ENST00000388090 DEFB114Q30KQ6 69 aa-6.6□□□□□ -3.47
SNORA40-201ENST00000388090 UACAQ9BZF9 1416 aa-6.6□□□□□ -3.47
SNORA40-201ENST00000388090 POLR2KP53803 58 aaKnown RBP-6.61□□□□□ -3.47
SNORA40-201ENST00000388090 NCMAPQ5T1S8 102 aa-6.61□□□□□ -3.47
SNORA40-201ENST00000388090 C3P01024 1663 aa-6.61□□□□□ -3.47
SNORA40-201ENST00000388090 ANKRD26Q9UPS8 1709 aa-6.63□□□□□ -3.47
SNORA40-201ENST00000388090 LINC00587B1AMM8 73 aa-6.65□□□□□ -3.47
SNORA40-201ENST00000388090 EFCAB10A6NFE3 127 aa-6.66□□□□□ -3.48
SNORA40-201ENST00000388090 TIAM1Q13009 1591 aa-6.66□□□□□ -3.48
SNORA40-201ENST00000388090 CNTLNQ9NXG0 1405 aa-6.68□□□□□ -3.48
SNORA40-201ENST00000388090 SMIM27A0A1W2PRY6 76 aa-6.69□□□□□ -3.48
SNORA40-201ENST00000388090 DEFB121Q5J5C9 76 aa-6.69□□□□□ -3.48
SNORA40-201ENST00000388090 PYY3Q5JQD4 70 aa-6.7□□□□□ -3.48
SNORA40-201ENST00000388090 S100A16Q96FQ6 103 aaKnown RBP-6.7□□□□□ -3.48
SNORA40-201ENST00000388090 WFDC10BQ8IUB3 73 aa-6.74□□□□□ -3.49
SNORA40-201ENST00000388090 LMTK2Q8IWU2 1503 aa-6.75□□□□□ -3.49
SNORA40-201ENST00000388090 C14orf144Q96I85 54 aa-6.76□□□□□ -3.49
SNORA40-201ENST00000388090 KANTRA0A1W2PQU2 76 aa-6.78□□□□□ -3.49
SNORA40-201ENST00000388090 TTTY10Q9BZA0 68 aa-6.79□□□□□ -3.5
SNORA40-201ENST00000388090 MADDQ8WXG6 1647 aa-6.8□□□□□ -3.5
SNORA40-201ENST00000388090 DNAH12Q6ZR08 3092 aa-6.81□□□□□ -3.5
SNORA40-201ENST00000388090 UNC80Q8N2C7 3258 aa-6.81□□□□□ -3.5
SNORA40-201ENST00000388090 SNHG12Q9BXW3 62 aa-6.9□□□□□ -3.51
SNORA40-201ENST00000388090 M0R143 59 aa-6.91□□□□□ -3.52
SNORA40-201ENST00000388090 ABCC3O15438 1527 aa-6.91□□□□□ -3.52
SNORA40-201ENST00000388090 LINC00308Q8TCZ7 52 aa-6.92□□□□□ -3.52
SNORA40-201ENST00000388090 ATP6V1G2-DDX39BF2Z307 99 aa-6.94□□□□□ -3.52
SNORA40-201ENST00000388090 TCEAL7Q9BRU2 100 aa-6.96□□□□□ -3.52
SNORA40-201ENST00000388090 TMEM167BQ9NRX6 74 aa-6.98□□□□□ -3.53
SNORA40-201ENST00000388090 ALS2Q96Q42 1657 aa-6.99□□□□□ -3.53
SNORA40-201ENST00000388090 DEFB131AP59861 70 aa-6.99□□□□□ -3.53
SNORA40-201ENST00000388090 LOC400499M0QZD8 3231 aa-7.01□□□□□ -3.53
SNORA40-201ENST00000388090 TDRG1Q3Y452 100 aa-7.01□□□□□ -3.53
SNORA40-201ENST00000388090 H3BVH4 76 aa-7.02□□□□□ -3.53
SNORA40-201ENST00000388090 CCDC180Q9P1Z9 1646 aa-7.02□□□□□ -3.53
SNORA40-201ENST00000388090 XIRP2A4UGR9 3374 aa-7.05□□□□□ -3.54
SNORA40-201ENST00000388090 LMO7Q8WWI1 1683 aa-7.05□□□□□ -3.54
SNORA40-201ENST00000388090 K7EMI3 77 aa-7.05□□□□□ -3.54
SNORA40-201ENST00000388090 NMES1Q9C002 83 aa-7.06□□□□□ -3.54
SNORA40-201ENST00000388090 KRTAP19-2Q3LHN2 52 aa-7.07□□□□□ -3.54
SNORA40-201ENST00000388090 H3BUT2 72 aa-7.08□□□□□ -3.54
SNORA40-201ENST00000388090 NRXN3Q9Y4C0 1643 aa-7.09□□□□□ -3.54
SNORA40-201ENST00000388090 ASPMQ8IZT6 3477 aa-7.1□□□□□ -3.55
SNORA40-201ENST00000388090 MROH2AA6NES4 1674 aa-7.11□□□□□ -3.55
SNORA40-201ENST00000388090 ABCC1P33527 1531 aa-7.11□□□□□ -3.55
SNORA40-201ENST00000388090 EFCAB6Q5THR3 1501 aa-7.13□□□□□ -3.55
SNORA40-201ENST00000388090 CENPFP49454 3210 aa-7.13□□□□□ -3.55
SNORA40-201ENST00000388090 ST20Q9HBF5 79 aa-7.15□□□□□ -3.55
SNORA40-201ENST00000388090 VCANP13611 3396 aa-7.16□□□□□ -3.56
SNORA40-201ENST00000388090 ATXN8Q156A1 80 aa-7.16□□□□□ -3.56
SNORA40-201ENST00000388090 PKIAP61925 76 aa-7.17□□□□□ -3.56
SNORA40-201ENST00000388090 SCRIBQ14160 1630 aa-7.17□□□□□ -3.56
SNORA40-201ENST00000388090 ANKARQ7Z5J8 1434 aa-7.18□□□□□ -3.56
SNORA40-201ENST00000388090 CFAP74Q9C0B2 1584 aa-7.18□□□□□ -3.56
SNORA40-201ENST00000388090 Q9H521 79 aa-7.19□□□□□ -3.56
SNORA40-201ENST00000388090 M0R1W7 72 aa-7.21□□□□□ -3.56
SNORA40-201ENST00000388090 ADIRFQ15847 76 aa-7.21□□□□□ -3.56
SNORA40-201ENST00000388090 VPS8Q8N3P4 1428 aa-7.22□□□□□ -3.57
SNORA40-201ENST00000388090 V9GYS6 101 aa-7.27□□□□□ -3.57
SNORA40-201ENST00000388090 DCAF1Q9Y4B6 1507 aa-7.32□□□□□ -3.58
SNORA40-201ENST00000388090 C18orf32Q8TCD1 76 aa-7.33□□□□□ -3.58
SNORA40-201ENST00000388090 CDH23Q9H251 3354 aa-7.35□□□□□ -3.59
SNORA40-201ENST00000388090 BRCA2P51587 3418 aa-7.36□□□□□ -3.59
SNORA40-201ENST00000388090 SYCP2Q9BX26 1530 aa-7.36□□□□□ -3.59
SNORA40-201ENST00000388090 SERF2P84101 59 aa-7.41□□□□□ -3.6
SNORA40-201ENST00000388090 DEFB133Q30KQ1 61 aa-7.41□□□□□ -3.6
SNORA40-201ENST00000388090 HILPDAQ9Y5L2 63 aa-7.41□□□□□ -3.6
SNORA40-201ENST00000388090 IGIPA6NJ69 53 aa-7.42□□□□□ -3.6
SNORA40-201ENST00000388090 ABCA8O94911 1581 aa-7.42□□□□□ -3.6
SNORA40-201ENST00000388090 LINC01549A6NIU2 74 aa-7.45□□□□□ -3.6
SNORA40-201ENST00000388090 S100A13Q99584 98 aa-7.46□□□□□ -3.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms