RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 A0A1B0GU69 56 aa9.95□□□□□ -0.82
GMDS-201ENST00000380805 A6NED7 52 aa9.93□□□□□ -0.82
GMDS-201ENST00000380805 LPAP08519 4548 aa9.93□□□□□ -0.82
GMDS-201ENST00000380805 LCA10Q71F78 164 aa9.88□□□□□ -0.83
GMDS-201ENST00000380805 CDC42SE1Q9NRR8 79 aa9.88□□□□□ -0.83
GMDS-201ENST00000380805 LRP2P98164 4655 aa9.85□□□□□ -0.83
GMDS-201ENST00000380805 A8MU10 97 aa9.85□□□□□ -0.83
GMDS-201ENST00000380805 SEC61GP60059 68 aa9.76□□□□□ -0.85
GMDS-201ENST00000380805 UQCR11O14957 56 aa9.73□□□□□ -0.85
GMDS-201ENST00000380805 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
GMDS-201ENST00000380805 SPATA8Q6RVD6 105 aa9.71□□□□□ -0.85
GMDS-201ENST00000380805 H1FX-AS1Q4G0G2 97 aa9.67□□□□□ -0.86
GMDS-201ENST00000380805 S4R3F8 94 aa9.67□□□□□ -0.86
GMDS-201ENST00000380805 SEC61BP60468 96 aaKnown RBP9.66□□□□□ -0.86
GMDS-201ENST00000380805 MIR22HGQ0VDD5 57 aa9.64□□□□□ -0.87
GMDS-201ENST00000380805 RBM12B-AS1Q9P1G2 102 aa9.62□□□□□ -0.87
GMDS-201ENST00000380805 UBR4Q5T4S7 5183 aa9.6□□□□□ -0.87
GMDS-201ENST00000380805 PMAIP1Q13794 54 aa9.56□□□□□ -0.88
GMDS-201ENST00000380805 MUC17Q685J3 4493 aa9.55□□□□□ -0.88
GMDS-201ENST00000380805 A0A1B0GU33 70 aa9.54□□□□□ -0.88
GMDS-201ENST00000380805 A6NN06 94 aa9.53□□□□□ -0.88
GMDS-201ENST00000380805 H0YAA0 97 aa9.5□□□□□ -0.89
GMDS-201ENST00000380805 KRTAP10-6P60371 365 aaPredicted RBP9.49□□□□□ -0.89
GMDS-201ENST00000380805 KRTAP4-1Q9BYQ7 146 aa9.47□□□□□ -0.89
GMDS-201ENST00000380805 KRTAP3-2Q9BYR7 98 aa9.47□□□□□ -0.89
GMDS-201ENST00000380805 MUC2Q02817 5179 aa9.4□□□□□ -0.9
GMDS-201ENST00000380805 CSAG1Q6PB30 78 aa9.4□□□□□ -0.9
GMDS-201ENST00000380805 RNF213Q63HN8 5207 aa9.4□□□□□ -0.9
GMDS-201ENST00000380805 KRTAP19-2Q3LHN2 52 aa9.36□□□□□ -0.91
GMDS-201ENST00000380805 KTN1-AS1Q86SY8 53 aa9.34□□□□□ -0.91
GMDS-201ENST00000380805 P0C880 135 aa9.31□□□□□ -0.92
GMDS-201ENST00000380805 ADM2Q7Z4H4 148 aa9.28□□□□□ -0.92
GMDS-201ENST00000380805 KRTAP13-4Q3LI77 160 aa9.26□□□□□ -0.93
GMDS-201ENST00000380805 M0QZ58 72 aa9.12□□□□□ -0.95
GMDS-201ENST00000380805 K7ERS5 55 aa9.1□□□□□ -0.95
GMDS-201ENST00000380805 FAT4Q6V0I7 4981 aa9.05□□□□□ -0.96
GMDS-201ENST00000380805 FLGP20930 4061 aaPredicted RBP9.04□□□□□ -0.96
GMDS-201ENST00000380805 A0A0D9SG42 100 aa9.02□□□□□ -0.96
GMDS-201ENST00000380805 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
GMDS-201ENST00000380805 KRTAP12-1P59990 96 aa8.93□□□□□ -0.98
GMDS-201ENST00000380805 PRAC1Q96KF2 57 aa8.92□□□□□ -0.98
GMDS-201ENST00000380805 R4GN34 69 aa8.91□□□□□ -0.98
GMDS-201ENST00000380805 KRTAP12-2P59991 146 aa8.91□□□□□ -0.98
GMDS-201ENST00000380805 LORP23490 312 aaPredicted RBP8.88□□□□□ -0.99
GMDS-201ENST00000380805 LCE2AQ5TA79 106 aaPredicted RBP8.83□□□□□ -1
GMDS-201ENST00000380805 ROMO1P60602 79 aa8.83□□□□□ -1
GMDS-201ENST00000380805 MT1HP80294 61 aa8.82□□□□□ -1
GMDS-201ENST00000380805 SPINT4Q6UDR6 99 aa8.8□□□□□ -1
GMDS-201ENST00000380805 CRIPTQ9P021 101 aa8.76□□□□□ -1.01
GMDS-201ENST00000380805 LINC01554Q52M75 96 aa8.71□□□□□ -1.01
GMDS-201ENST00000380805 KRTAP25-1Q3LHN0 102 aa8.67□□□□□ -1.02
GMDS-201ENST00000380805 M0R2T5 61 aa8.66□□□□□ -1.02
GMDS-201ENST00000380805 SPRR2GQ9BYE4 73 aa8.51□□□□□ -1.05
GMDS-201ENST00000380805 MT2AP02795 61 aa8.46□□□□□ -1.05
GMDS-201ENST00000380805 KRTAP9-8Q9BYQ0 159 aa8.46□□□□□ -1.05
GMDS-201ENST00000380805 KRTAP19-1Q8IUB9 90 aa8.44□□□□□ -1.06
GMDS-201ENST00000380805 C10orf95Q9H7T3 257 aa8.43□□□□□ -1.06
GMDS-201ENST00000380805 MT1FP04733 61 aa8.42□□□□□ -1.06
GMDS-201ENST00000380805 CAMK2N1Q7Z7J9 78 aa8.37□□□□□ -1.07
GMDS-201ENST00000380805 KRTAP10-10P60014 251 aa8.34□□□□□ -1.07
GMDS-201ENST00000380805 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
GMDS-201ENST00000380805 PLAC4Q8WY50 150 aa8.21□□□□□ -1.09
GMDS-201ENST00000380805 LCE2DQ5TA82 110 aaPredicted RBP8.17□□□□□ -1.1
GMDS-201ENST00000380805 KRTAP9-2Q9BYQ4 174 aa8.15□□□□□ -1.1
GMDS-201ENST00000380805 KRTAP9-3Q9BYQ3 159 aa8.15□□□□□ -1.11
GMDS-201ENST00000380805 MT1BP07438 61 aa8.08□□□□□ -1.12
GMDS-201ENST00000380805 PP632Q6XCG6 107 aa8.08□□□□□ -1.12
GMDS-201ENST00000380805 TNP1P09430 55 aa8.06□□□□□ -1.12
GMDS-201ENST00000380805 KRTAP23-1A1A580 65 aa8.02□□□□□ -1.13
GMDS-201ENST00000380805 LCE2BO14633 110 aa8.02□□□□□ -1.13
GMDS-201ENST00000380805 FSIP2Q5CZC0 6907 aa7.93□□□□□ -1.14
GMDS-201ENST00000380805 USH2AO75445 5202 aa7.93□□□□□ -1.14
GMDS-201ENST00000380805 KRTAP10-5P60370 271 aa7.89□□□□□ -1.15
GMDS-201ENST00000380805 MT1XP80297 61 aa7.89□□□□□ -1.15
GMDS-201ENST00000380805 KRTAP15-1Q3LI76 137 aa7.8□□□□□ -1.16
GMDS-201ENST00000380805 CRCT1Q9UGL9 99 aa7.77□□□□□ -1.17
GMDS-201ENST00000380805 SSPOA2VEC9 5147 aa7.76□□□□□ -1.17
GMDS-201ENST00000380805 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.18
GMDS-201ENST00000380805 KRTAP9-6A0A140TA67 174 aa7.69□□□□□ -1.18
GMDS-201ENST00000380805 LCE3AQ5TA76 89 aa7.66□□□□□ -1.18
GMDS-201ENST00000380805 KRTAP19-6Q3LI70 58 aa7.61□□□□□ -1.19
GMDS-201ENST00000380805 KRTAP8-1Q8IUC2 63 aa7.59□□□□□ -1.19
GMDS-201ENST00000380805 KRTAP10-7P60409 375 aaPredicted RBP7.58□□□□□ -1.2
GMDS-201ENST00000380805 KRTAP10-12P60413 245 aa7.58□□□□□ -1.2
GMDS-201ENST00000380805 FCGBPQ9Y6R7 5405 aaPredicted RBP7.52□□□□□ -1.21
GMDS-201ENST00000380805 H3BS24 57 aa7.47□□□□□ -1.21
GMDS-201ENST00000380805 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
GMDS-201ENST00000380805 KRTAP12-3P60328 96 aa7.35□□□□□ -1.23
GMDS-201ENST00000380805 NDUFAF8A1L188 74 aa7.33□□□□□ -1.24
GMDS-201ENST00000380805 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.22□□□□□ -1.25
GMDS-201ENST00000380805 MACF1Q9UPN3 7388 aaKnown RBP7.21□□□□□ -1.25
GMDS-201ENST00000380805 KRTAP19-5Q3LI72 72 aa7.18□□□□□ -1.26
GMDS-201ENST00000380805 LUZP6Q538Z0 58 aa7.17□□□□□ -1.26
GMDS-201ENST00000380805 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
GMDS-201ENST00000380805 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
GMDS-201ENST00000380805 KMT2DO14686 5537 aa7.11□□□□□ -1.27
GMDS-201ENST00000380805 SYNE2Q8WXH0 6885 aaKnown RBP7.06□□□□□ -1.28
GMDS-201ENST00000380805 KRTAP19-7Q3SYF9 63 aa7.05□□□□□ -1.28
GMDS-201ENST00000380805 KRTAP9-7A8MTY7 169 aa6.98□□□□□ -1.29
GMDS-201ENST00000380805 KRTAP19-4Q3LI73 84 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms