RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 SPINK7P58062 85 aa3.53□□□□□ -1.84
FOCAD-202ENST00000380249 MMP24-AS1A0A0U1RRL7 71 aa3.52□□□□□ -1.85
FOCAD-202ENST00000380249 LRP1Q07954 4544 aaKnown RBP3.52□□□□□ -1.85
FOCAD-202ENST00000380249 VPS13BQ7Z7G8 4022 aa3.51□□□□□ -1.85
FOCAD-202ENST00000380249 PLAC4Q8WY50 150 aa3.5□□□□□ -1.85
FOCAD-202ENST00000380249 LINC01558Q9Y6Z2 57 aa3.5□□□□□ -1.85
FOCAD-202ENST00000380249 HMCN2Q8NDA2 5059 aa3.48□□□□□ -1.85
FOCAD-202ENST00000380249 KRTAP13-3Q3SY46 172 aa3.48□□□□□ -1.85
FOCAD-202ENST00000380249 HERC1Q15751 4861 aa3.48□□□□□ -1.85
FOCAD-202ENST00000380249 FAT3Q8TDW7 4589 aa3.47□□□□□ -1.85
FOCAD-202ENST00000380249 HRES1P13985 223 aa3.46□□□□□ -1.86
FOCAD-202ENST00000380249 XP32Q5T750 250 aa3.45□□□□□ -1.86
FOCAD-202ENST00000380249 C9orf92A6NGG3 77 aa3.44□□□□□ -1.86
FOCAD-202ENST00000380249 A0A1B0GU33 70 aa3.43□□□□□ -1.86
FOCAD-202ENST00000380249 A8MU10 97 aa3.42□□□□□ -1.86
FOCAD-202ENST00000380249 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
FOCAD-202ENST00000380249 C20orf166-AS1Q96NR2 134 aa3.41□□□□□ -1.86
FOCAD-202ENST00000380249 A8MUU9 505 aa3.41□□□□□ -1.86
FOCAD-202ENST00000380249 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
FOCAD-202ENST00000380249 UBR4Q5T4S7 5183 aa3.4□□□□□ -1.86
FOCAD-202ENST00000380249 H1FX-AS1Q4G0G2 97 aa3.4□□□□□ -1.86
FOCAD-202ENST00000380249 COX6B2Q6YFQ2 88 aa3.4□□□□□ -1.86
FOCAD-202ENST00000380249 ADM2Q7Z4H4 148 aa3.39□□□□□ -1.87
FOCAD-202ENST00000380249 ROMO1P60602 79 aa3.39□□□□□ -1.87
FOCAD-202ENST00000380249 A6NN06 94 aa3.38□□□□□ -1.87
FOCAD-202ENST00000380249 PKHD1L1Q86WI1 4243 aa3.37□□□□□ -1.87
FOCAD-202ENST00000380249 Q5W150 140 aa3.36□□□□□ -1.87
FOCAD-202ENST00000380249 LRP2P98164 4655 aa3.35□□□□□ -1.87
FOCAD-202ENST00000380249 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
FOCAD-202ENST00000380249 NOTCH2NLQ7Z3S9 236 aa3.33□□□□□ -1.88
FOCAD-202ENST00000380249 TNXBP22105 4242 aa3.31□□□□□ -1.88
FOCAD-202ENST00000380249 SPATA8Q6RVD6 105 aa3.29□□□□□ -1.88
FOCAD-202ENST00000380249 KRTAP25-1Q3LHN0 102 aa3.28□□□□□ -1.88
FOCAD-202ENST00000380249 S4R3F8 94 aa3.21□□□□□ -1.9
FOCAD-202ENST00000380249 M0R2T5 61 aa3.2□□□□□ -1.9
FOCAD-202ENST00000380249 KRTAP4-1Q9BYQ7 146 aa3.19□□□□□ -1.9
FOCAD-202ENST00000380249 R4GN34 69 aa3.19□□□□□ -1.9
FOCAD-202ENST00000380249 FAT4Q6V0I7 4981 aa3.15□□□□□ -1.9
FOCAD-202ENST00000380249 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
FOCAD-202ENST00000380249 M0QZ58 72 aa3.14□□□□□ -1.91
FOCAD-202ENST00000380249 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
FOCAD-202ENST00000380249 LCE2CQ5TA81 110 aa3.12□□□□□ -1.91
FOCAD-202ENST00000380249 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
FOCAD-202ENST00000380249 LCE2AQ5TA79 106 aaPredicted RBP3.11□□□□□ -1.91
FOCAD-202ENST00000380249 LPAP08519 4548 aa3.1□□□□□ -1.91
FOCAD-202ENST00000380249 MUC17Q685J3 4493 aa3.09□□□□□ -1.92
FOCAD-202ENST00000380249 MUC2Q02817 5179 aa3.09□□□□□ -1.92
FOCAD-202ENST00000380249 MT1HP80294 61 aa3.07□□□□□ -1.92
FOCAD-202ENST00000380249 KRTAP3-1Q9BYR8 98 aa3.05□□□□□ -1.92
FOCAD-202ENST00000380249 H0YAA0 97 aa3.03□□□□□ -1.92
FOCAD-202ENST00000380249 P0C880 135 aa3.03□□□□□ -1.92
FOCAD-202ENST00000380249 KRTAP10-6P60371 365 aaPredicted RBP3.01□□□□□ -1.93
FOCAD-202ENST00000380249 LORP23490 312 aaPredicted RBP3□□□□□ -1.93
FOCAD-202ENST00000380249 FLGP20930 4061 aaPredicted RBP2.97□□□□□ -1.93
FOCAD-202ENST00000380249 KRTAP3-3Q9BYR6 98 aa2.95□□□□□ -1.94
FOCAD-202ENST00000380249 MT2AP02795 61 aa2.94□□□□□ -1.94
FOCAD-202ENST00000380249 KRTAP9-8Q9BYQ0 159 aa2.94□□□□□ -1.94
FOCAD-202ENST00000380249 TNP1P09430 55 aa2.94□□□□□ -1.94
FOCAD-202ENST00000380249 KRTAP10-10P60014 251 aa2.94□□□□□ -1.94
FOCAD-202ENST00000380249 LCE2DQ5TA82 110 aaPredicted RBP2.93□□□□□ -1.94
FOCAD-202ENST00000380249 MT1FP04733 61 aa2.89□□□□□ -1.95
FOCAD-202ENST00000380249 KRTAP9-3Q9BYQ3 159 aa2.86□□□□□ -1.95
FOCAD-202ENST00000380249 SPRR2GQ9BYE4 73 aa2.84□□□□□ -1.95
FOCAD-202ENST00000380249 USH2AO75445 5202 aa2.83□□□□□ -1.96
FOCAD-202ENST00000380249 KRTAP9-2Q9BYQ4 174 aa2.83□□□□□ -1.96
FOCAD-202ENST00000380249 KRTAP3-2Q9BYR7 98 aa2.82□□□□□ -1.96
FOCAD-202ENST00000380249 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
FOCAD-202ENST00000380249 KRTAP19-1Q8IUB9 90 aa2.81□□□□□ -1.96
FOCAD-202ENST00000380249 KRTAP12-2P59991 146 aa2.8□□□□□ -1.96
FOCAD-202ENST00000380249 FSIP2Q5CZC0 6907 aa2.78□□□□□ -1.96
FOCAD-202ENST00000380249 LCE2BO14633 110 aa2.77□□□□□ -1.97
FOCAD-202ENST00000380249 KRTAP12-1P59990 96 aa2.77□□□□□ -1.97
FOCAD-202ENST00000380249 KRTAP23-1A1A580 65 aa2.76□□□□□ -1.97
FOCAD-202ENST00000380249 SSPOA2VEC9 5147 aa2.76□□□□□ -1.97
FOCAD-202ENST00000380249 CRCT1Q9UGL9 99 aa2.75□□□□□ -1.97
FOCAD-202ENST00000380249 KRTAP13-4Q3LI77 160 aa2.73□□□□□ -1.97
FOCAD-202ENST00000380249 KRTAP19-6Q3LI70 58 aa2.72□□□□□ -1.97
FOCAD-202ENST00000380249 MT1BP07438 61 aa2.72□□□□□ -1.97
FOCAD-202ENST00000380249 PRO2289Q9P1D8 64 aa2.72□□□□□ -1.97
FOCAD-202ENST00000380249 KRTAP15-1Q3LI76 137 aa2.71□□□□□ -1.98
FOCAD-202ENST00000380249 KRTAP9-6A0A140TA67 174 aa2.71□□□□□ -1.98
FOCAD-202ENST00000380249 INE1O15225 51 aa2.69□□□□□ -1.98
FOCAD-202ENST00000380249 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
FOCAD-202ENST00000380249 KRTAP10-5P60370 271 aa2.65□□□□□ -1.98
FOCAD-202ENST00000380249 MT1XP80297 61 aa2.58□□□□□ -2
FOCAD-202ENST00000380249 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.53□□□□□ -2
FOCAD-202ENST00000380249 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
FOCAD-202ENST00000380249 KRTAP10-12P60413 245 aa2.48□□□□□ -2.01
FOCAD-202ENST00000380249 MACF1Q9UPN3 7388 aaKnown RBP2.48□□□□□ -2.01
FOCAD-202ENST00000380249 KRTAP9-7A8MTY7 169 aa2.46□□□□□ -2.02
FOCAD-202ENST00000380249 KMT2DO14686 5537 aa2.45□□□□□ -2.02
FOCAD-202ENST00000380249 KRTAP8-1Q8IUC2 63 aa2.44□□□□□ -2.02
FOCAD-202ENST00000380249 KRTAP5-9P26371 169 aa2.44□□□□□ -2.02
FOCAD-202ENST00000380249 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
FOCAD-202ENST00000380249 KRTAP19-4Q3LI73 84 aa2.42□□□□□ -2.02
FOCAD-202ENST00000380249 MDN1Q9NU22 5596 aa2.4□□□□□ -2.02
FOCAD-202ENST00000380249 SYNE2Q8WXH0 6885 aaKnown RBP2.38□□□□□ -2.03
FOCAD-202ENST00000380249 SPRR2FQ96RM1 72 aa2.37□□□□□ -2.03
FOCAD-202ENST00000380249 KRTAP4-8A0A0G2JLE6 195 aa2.36□□□□□ -2.03
FOCAD-202ENST00000380249 KRTAP4-8Q9BYQ9 185 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms