RNA–Protein interactions for RNA: ENST00000380135.7

LETMD1-202, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 1,566 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-202ENST00000380135 SVIPQ8NHG7 77 aa7.43□□□□□ -1.22
LETMD1-202ENST00000380135 KRTAP19-1Q8IUB9 90 aa7.42□□□□□ -1.22
LETMD1-202ENST00000380135 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
LETMD1-202ENST00000380135 FAM236AA0A1B0GUQ0 79 aa7.4□□□□□ -1.22
LETMD1-202ENST00000380135 FAM236BA0A1B0GV22 79 aa7.4□□□□□ -1.22
LETMD1-202ENST00000380135 KLKP1Q107X0 134 aa7.38□□□□□ -1.23
LETMD1-202ENST00000380135 CCDC179H3BU77 68 aa7.36□□□□□ -1.23
LETMD1-202ENST00000380135 A8MUN3 132 aa7.35□□□□□ -1.23
LETMD1-202ENST00000380135 H3BPC8 53 aa7.35□□□□□ -1.23
LETMD1-202ENST00000380135 FCGBPQ9Y6R7 5405 aaPredicted RBP7.32□□□□□ -1.24
LETMD1-202ENST00000380135 NDUFC1O43677 76 aa7.32□□□□□ -1.24
LETMD1-202ENST00000380135 KRTAP19-6Q3LI70 58 aa7.32□□□□□ -1.24
LETMD1-202ENST00000380135 COX7CP15954 63 aa7.3□□□□□ -1.24
LETMD1-202ENST00000380135 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
LETMD1-202ENST00000380135 SERP2Q8N6R1 65 aa7.26□□□□□ -1.25
LETMD1-202ENST00000380135 SPRR2GQ9BYE4 73 aa7.25□□□□□ -1.25
LETMD1-202ENST00000380135 SMIM20Q8N5G0 67 aa7.23□□□□□ -1.25
LETMD1-202ENST00000380135 H0YAA0 97 aa7.2□□□□□ -1.26
LETMD1-202ENST00000380135 TRAV7A0A075B6U4 112 aa7.2□□□□□ -1.26
LETMD1-202ENST00000380135 CRIPTQ9P021 101 aa7.2□□□□□ -1.26
LETMD1-202ENST00000380135 KRTAP19-8Q3LI54 63 aa7.19□□□□□ -1.26
LETMD1-202ENST00000380135 Q5VV11 94 aa7.18□□□□□ -1.26
LETMD1-202ENST00000380135 DMAC1Q96GE9 116 aa7.18□□□□□ -1.26
LETMD1-202ENST00000380135 MT1BP07438 61 aa7.16□□□□□ -1.26
LETMD1-202ENST00000380135 KRTAP9-7A8MTY7 169 aa7.15□□□□□ -1.27
LETMD1-202ENST00000380135 TMEM258P61165 79 aa7.15□□□□□ -1.27
LETMD1-202ENST00000380135 RPS28P62857 69 aaKnown RBP7.13□□□□□ -1.27
LETMD1-202ENST00000380135 ADM2Q7Z4H4 148 aa7.13□□□□□ -1.27
LETMD1-202ENST00000380135 ACYP2P14621 99 aa7.05□□□□□ -1.28
LETMD1-202ENST00000380135 A6NN06 94 aa7.03□□□□□ -1.28
LETMD1-202ENST00000380135 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
LETMD1-202ENST00000380135 C20orf197Q8N268 126 aa7.03□□□□□ -1.28
LETMD1-202ENST00000380135 SNURFQ9Y675 71 aa7.02□□□□□ -1.29
LETMD1-202ENST00000380135 CYSTM1Q9H1C7 97 aa6.99□□□□□ -1.29
LETMD1-202ENST00000380135 P0C880 135 aa6.98□□□□□ -1.29
LETMD1-202ENST00000380135 ATP5EP56381 51 aaPredicted RBP6.98□□□□□ -1.29
LETMD1-202ENST00000380135 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
LETMD1-202ENST00000380135 H7BZZ5 65 aa6.95□□□□□ -1.3
LETMD1-202ENST00000380135 SPTSSBQ8NFR3 76 aa6.95□□□□□ -1.3
LETMD1-202ENST00000380135 KRTAP3-2Q9BYR7 98 aa6.95□□□□□ -1.3
LETMD1-202ENST00000380135 SERP1Q9Y6X1 66 aa6.94□□□□□ -1.3
LETMD1-202ENST00000380135 R4GN34 69 aa6.94□□□□□ -1.3
LETMD1-202ENST00000380135 SPANXA2-OT1Q8N9U9 137 aa6.93□□□□□ -1.3
LETMD1-202ENST00000380135 CHKB-CPT1BH3BT56 60 aa6.91□□□□□ -1.3
LETMD1-202ENST00000380135 SYNE2Q8WXH0 6885 aaKnown RBP6.89□□□□□ -1.31
LETMD1-202ENST00000380135 M0QZ58 72 aa6.89□□□□□ -1.31
LETMD1-202ENST00000380135 KRTAP6-3Q3LI67 103 aa6.86□□□□□ -1.31
LETMD1-202ENST00000380135 PLAC4Q8WY50 150 aa6.86□□□□□ -1.31
LETMD1-202ENST00000380135 SMIM26A0A096LP01 95 aa6.82□□□□□ -1.32
LETMD1-202ENST00000380135 LINC01554Q52M75 96 aa6.78□□□□□ -1.32
LETMD1-202ENST00000380135 PRO2289Q9P1D8 64 aa6.78□□□□□ -1.32
LETMD1-202ENST00000380135 MT1XP80297 61 aa6.74□□□□□ -1.33
LETMD1-202ENST00000380135 COA5Q86WW8 74 aa6.71□□□□□ -1.34
LETMD1-202ENST00000380135 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
LETMD1-202ENST00000380135 V9GYY9 64 aa6.59□□□□□ -1.35
LETMD1-202ENST00000380135 Q1T7F1 81 aa6.58□□□□□ -1.36
LETMD1-202ENST00000380135 SEC61GP60059 68 aa6.57□□□□□ -1.36
LETMD1-202ENST00000380135 KRTAP12-2P59991 146 aa6.57□□□□□ -1.36
LETMD1-202ENST00000380135 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
LETMD1-202ENST00000380135 PRO0628Q9UI54 55 aa6.55□□□□□ -1.36
LETMD1-202ENST00000380135 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.37
LETMD1-202ENST00000380135 NEBP20929 6669 aa6.5□□□□□ -1.37
LETMD1-202ENST00000380135 KMT2DO14686 5537 aa6.48□□□□□ -1.37
LETMD1-202ENST00000380135 KRTAP8-1Q8IUC2 63 aa6.47□□□□□ -1.37
LETMD1-202ENST00000380135 A0A1B0GU33 70 aa6.44□□□□□ -1.38
LETMD1-202ENST00000380135 KRTAP10-7P60409 375 aaPredicted RBP6.44□□□□□ -1.38
LETMD1-202ENST00000380135 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
LETMD1-202ENST00000380135 BRK1Q8WUW1 75 aa6.43□□□□□ -1.38
LETMD1-202ENST00000380135 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
LETMD1-202ENST00000380135 KRTAP10-12P60413 245 aa6.41□□□□□ -1.38
LETMD1-202ENST00000380135 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
LETMD1-202ENST00000380135 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.38
LETMD1-202ENST00000380135 CAMK2N1Q7Z7J9 78 aa6.4□□□□□ -1.38
LETMD1-202ENST00000380135 A0A0D9SG42 100 aa6.39□□□□□ -1.39
LETMD1-202ENST00000380135 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
LETMD1-202ENST00000380135 A0A1B0GU69 56 aa6.38□□□□□ -1.39
LETMD1-202ENST00000380135 PSPHP1O15172 72 aa6.35□□□□□ -1.39
LETMD1-202ENST00000380135 LINC01558Q9Y6Z2 57 aa6.33□□□□□ -1.4
LETMD1-202ENST00000380135 SPRR2EP22531 72 aa6.31□□□□□ -1.4
LETMD1-202ENST00000380135 SPRR2BP35325 72 aa6.31□□□□□ -1.4
LETMD1-202ENST00000380135 SPRR2AP35326 72 aa6.31□□□□□ -1.4
LETMD1-202ENST00000380135 PRR15LQ9BU68 103 aa6.31□□□□□ -1.4
LETMD1-202ENST00000380135 SPINT4Q6UDR6 99 aa6.3□□□□□ -1.4
LETMD1-202ENST00000380135 KRTAP20-1Q3LI63 56 aa6.28□□□□□ -1.4
LETMD1-202ENST00000380135 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
LETMD1-202ENST00000380135 LCE1AQ5T7P2 110 aa6.25□□□□□ -1.41
LETMD1-202ENST00000380135 A6NED7 52 aa6.22□□□□□ -1.41
LETMD1-202ENST00000380135 A8MU10 97 aa6.19□□□□□ -1.42
LETMD1-202ENST00000380135 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
LETMD1-202ENST00000380135 KRTAP2-3P0C7H8 128 aa6.18□□□□□ -1.42
LETMD1-202ENST00000380135 KRTAP2-4Q9BYR9 128 aa6.18□□□□□ -1.42
LETMD1-202ENST00000380135 PMAIP1Q13794 54 aa6.12□□□□□ -1.43
LETMD1-202ENST00000380135 SPRR2DP22532 72 aa6.1□□□□□ -1.43
LETMD1-202ENST00000380135 UQCR11O14957 56 aa6.03□□□□□ -1.44
LETMD1-202ENST00000380135 KRTAP19-7Q3SYF9 63 aa6.03□□□□□ -1.44
LETMD1-202ENST00000380135 KTN1-AS1Q86SY8 53 aa6.01□□□□□ -1.45
LETMD1-202ENST00000380135 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
LETMD1-202ENST00000380135 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
LETMD1-202ENST00000380135 C10orf95Q9H7T3 257 aa5.98□□□□□ -1.45
LETMD1-202ENST00000380135 MT1EP04732 61 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms