RNA–Protein interactions for RNA: ENST00000380135.7

LETMD1-202, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 1,566 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-202ENST00000380135 NISCHQ9Y2I1 1504 aa39.09■■■■□ 3.85
LETMD1-202ENST00000380135 CCDC180Q9P1Z9 1646 aa34.74■■■■□ 3.15
LETMD1-202ENST00000380135 ABCC9O60706 1549 aa34.1■■■■□ 3.05
LETMD1-202ENST00000380135 RB1CC1Q8TDY2 1594 aa32.77■■■□□ 2.84
LETMD1-202ENST00000380135 DCAF8L2P0C7V8 631 aa32.75■■■□□ 2.83
LETMD1-202ENST00000380135 NACADO15069 1562 aa32.72■■■□□ 2.83
LETMD1-202ENST00000380135 ZCCHC6Q5VYS8 1495 aaKnown RBP32.52■■■□□ 2.8
LETMD1-202ENST00000380135 MYO15BQ96JP2 1530 aa32.5■■■□□ 2.79
LETMD1-202ENST00000380135 DCAF1Q9Y4B6 1507 aa32.34■■■□□ 2.77
LETMD1-202ENST00000380135 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
LETMD1-202ENST00000380135 PABPN1Q86U42 306 aaKnown RBP eCLIP31.89■■■□□ 2.7
LETMD1-202ENST00000380135 BICRAQ9NZM4 1560 aa31.76■■■□□ 2.68
LETMD1-202ENST00000380135 SCRIBQ14160 1630 aa31.69■■■□□ 2.66
LETMD1-202ENST00000380135 SHROOM4Q9ULL8 1493 aa31.43■■■□□ 2.62
LETMD1-202ENST00000380135 DNAJC5BQ9UF47 199 aa31.4■■■□□ 2.62
LETMD1-202ENST00000380135 EIF4G1Q04637 1599 aaKnown RBP30.93■■■□□ 2.54
LETMD1-202ENST00000380135 CC2D2AQ9P2K1 1620 aa30.82■■■□□ 2.53
LETMD1-202ENST00000380135 CECR2Q9BXF3 1484 aa30.66■■■□□ 2.5
LETMD1-202ENST00000380135 SMARCA4P51532 1647 aa30.32■■■□□ 2.44
LETMD1-202ENST00000380135 BAZ1AQ9NRL2 1556 aaPredicted RBP30.29■■■□□ 2.44
LETMD1-202ENST00000380135 NCAPD3P42695 1498 aa30.22■■■□□ 2.43
LETMD1-202ENST00000380135 ATAD2BQ9ULI0 1458 aa30.2■■■□□ 2.43
LETMD1-202ENST00000380135 SMARCA2P51531 1590 aa30.16■■■□□ 2.42
LETMD1-202ENST00000380135 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
LETMD1-202ENST00000380135 PEG3Q9GZU2 1588 aa30.03■■■□□ 2.4
LETMD1-202ENST00000380135 HMGXB3Q12766 1538 aa30.02■■■□□ 2.4
LETMD1-202ENST00000380135 BAZ1BQ9UIG0 1483 aaKnown RBP29.94■■■□□ 2.38
LETMD1-202ENST00000380135 WIZO95785 1651 aa29.77■■■□□ 2.36
LETMD1-202ENST00000380135 RSF1Q96T23 1441 aaPredicted RBP29.76■■■□□ 2.35
LETMD1-202ENST00000380135 NESP48681 1621 aa29.48■■■□□ 2.31
LETMD1-202ENST00000380135 TOP2AP11388 1531 aaKnown RBP29.46■■■□□ 2.31
LETMD1-202ENST00000380135 ERCC6Q03468 1493 aa29.4■■■□□ 2.3
LETMD1-202ENST00000380135 LAMC3Q9Y6N6 1575 aa29.4■■■□□ 2.3
LETMD1-202ENST00000380135 CADPSQ9ULU8 1353 aa29.34■■■□□ 2.29
LETMD1-202ENST00000380135 PDS5BQ9NTI5 1447 aa29.24■■■□□ 2.27
LETMD1-202ENST00000380135 CCDC88BA6NC98 1476 aa29.14■■■□□ 2.26
LETMD1-202ENST00000380135 CFTRP13569 1480 aa29.12■■■□□ 2.25
LETMD1-202ENST00000380135 CUX2O14529 1486 aa29.12■■■□□ 2.25
LETMD1-202ENST00000380135 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
LETMD1-202ENST00000380135 THOC2Q8NI27 1593 aaKnown RBP29.01■■■□□ 2.23
LETMD1-202ENST00000380135 SUPT5HO00267 1087 aaKnown RBP28.99■■■□□ 2.23
LETMD1-202ENST00000380135 FANCD2Q9BXW9 1451 aa28.98■■■□□ 2.23
LETMD1-202ENST00000380135 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
LETMD1-202ENST00000380135 MRC2Q9UBG0 1479 aa28.91■■■□□ 2.22
LETMD1-202ENST00000380135 PRDM2Q13029 1718 aa28.83■■■□□ 2.21
LETMD1-202ENST00000380135 WDR62O43379 1518 aa28.81■■■□□ 2.2
LETMD1-202ENST00000380135 URB2Q14146 1524 aaKnown RBP28.68■■■□□ 2.18
LETMD1-202ENST00000380135 ABCC8Q09428 1581 aa28.53■■■□□ 2.16
LETMD1-202ENST00000380135 TOPBP1Q92547 1522 aa28.5■■■□□ 2.15
LETMD1-202ENST00000380135 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.14
LETMD1-202ENST00000380135 DNAJC5Q9H3Z4 198 aa28.36■■■□□ 2.13
LETMD1-202ENST00000380135 IFT140Q96RY7 1462 aa28.35■■■□□ 2.13
LETMD1-202ENST00000380135 CUX1P39880 1505 aa28.25■■■□□ 2.11
LETMD1-202ENST00000380135 POLA1P09884 1462 aaPredicted RBP28.25■■■□□ 2.11
LETMD1-202ENST00000380135 ZNF608Q9ULD9 1512 aaPredicted RBP28.21■■■□□ 2.11
LETMD1-202ENST00000380135 TARBP1Q13395 1621 aaKnown RBP28.18■■■□□ 2.1
LETMD1-202ENST00000380135 FGD5Q6ZNL6 1462 aa28.17■■■□□ 2.1
LETMD1-202ENST00000380135 SOGA1O94964 1423 aa28.17■■■□□ 2.1
LETMD1-202ENST00000380135 RAD54L2Q9Y4B4 1467 aa28.14■■■□□ 2.09
LETMD1-202ENST00000380135 AQRO60306 1485 aaKnown RBP eCLIP28.07■■■□□ 2.081e-6■■□□□ 12.7
LETMD1-202ENST00000380135 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
LETMD1-202ENST00000380135 WRNQ14191 1432 aaPredicted RBP eCLIP28.07■■■□□ 2.08
LETMD1-202ENST00000380135 TDRD9Q8NDG6 1382 aaKnown RBP28.01■■■□□ 2.08
LETMD1-202ENST00000380135 TOP2BQ02880 1626 aa27.99■■■□□ 2.07
LETMD1-202ENST00000380135 BIVM-ERCC5R4GMW8 1640 aa27.97■■■□□ 2.07
LETMD1-202ENST00000380135 SYNJ1O43426 1573 aa27.96■■■□□ 2.07
LETMD1-202ENST00000380135 WDR97A6NE52 1622 aa27.95■■■□□ 2.07
LETMD1-202ENST00000380135 OSCARQ8IYS5 282 aa27.95■■■□□ 2.07
LETMD1-202ENST00000380135 ABCA10Q8WWZ4 1543 aa27.91■■■□□ 2.06
LETMD1-202ENST00000380135 GRIN2BQ13224 1484 aa27.83■■■□□ 2.05
LETMD1-202ENST00000380135 GAPVD1Q14C86 1478 aa27.82■■■□□ 2.04
LETMD1-202ENST00000380135 SNAPC4Q5SXM2 1469 aa27.79■■■□□ 2.04
LETMD1-202ENST00000380135 FBLN2P98095 1184 aa27.77■■■□□ 2.04
LETMD1-202ENST00000380135 ABCA5Q8WWZ7 1642 aa27.76■■■□□ 2.03
LETMD1-202ENST00000380135 MAGI1Q96QZ7 1491 aaPredicted RBP27.75■■■□□ 2.03
LETMD1-202ENST00000380135 CHD1O14646 1710 aa27.72■■■□□ 2.03
LETMD1-202ENST00000380135 PBRM1Q86U86 1689 aa27.71■■■□□ 2.03
LETMD1-202ENST00000380135 CHMP7Q8WUX9 453 aaPredicted RBP27.69■■■□□ 2.02
LETMD1-202ENST00000380135 SYNJ2O15056 1496 aa27.65■■■□□ 2.02
LETMD1-202ENST00000380135 ERICH3Q5RHP9 1530 aa27.56■■■□□ 2
LETMD1-202ENST00000380135 ADAMTS12P58397 1594 aa27.51■■□□□ 1.99
LETMD1-202ENST00000380135 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
LETMD1-202ENST00000380135 KIF27Q86VH2 1401 aa27.49■■□□□ 1.99
LETMD1-202ENST00000380135 GRIN2AQ12879 1464 aa27.46■■□□□ 1.99
LETMD1-202ENST00000380135 CLASP1Q7Z460 1538 aa27.44■■□□□ 1.98
LETMD1-202ENST00000380135 RIMBP3CA6NJZ7 1639 aa27.44■■□□□ 1.98
LETMD1-202ENST00000380135 RIMBP3BA6NNM3 1639 aa27.44■■□□□ 1.98
LETMD1-202ENST00000380135 RIMBP3Q9UFD9 1639 aa27.44■■□□□ 1.98
LETMD1-202ENST00000380135 ARHGEF11O15085 1522 aa27.44■■□□□ 1.98
LETMD1-202ENST00000380135 IGF1RP08069 1367 aa27.41■■□□□ 1.98
LETMD1-202ENST00000380135 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
LETMD1-202ENST00000380135 NUP160Q12769 1436 aa27.34■■□□□ 1.97
LETMD1-202ENST00000380135 CEP170Q5SW79 1584 aa27.31■■□□□ 1.96
LETMD1-202ENST00000380135 CUL7Q14999 1698 aa27.28■■□□□ 1.96
LETMD1-202ENST00000380135 CYB5RLQ6IPT4 315 aa27.25■■□□□ 1.95
LETMD1-202ENST00000380135 CARMIL1Q5VZK9 1371 aa27.24■■□□□ 1.95
LETMD1-202ENST00000380135 RUSC2Q8N2Y8 1516 aa27.21■■□□□ 1.95
LETMD1-202ENST00000380135 ARAP1Q96P48 1450 aa27.21■■□□□ 1.95
LETMD1-202ENST00000380135 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
LETMD1-202ENST00000380135 JPH4Q96JJ6 628 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 217.8 ms