RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 HERC2O95714 4834 aa8.22□□□□□ -1.09
BRF1-203ENST00000379937 TNXBP22105 4242 aa8.21□□□□□ -1.09
BRF1-203ENST00000379937 MIR22HGQ0VDD5 57 aa8.2□□□□□ -1.1
BRF1-203ENST00000379937 J3QL48 77 aa8.19□□□□□ -1.1
BRF1-203ENST00000379937 A8MUU9 505 aa8.19□□□□□ -1.1
BRF1-203ENST00000379937 XP32Q5T750 250 aa8.19□□□□□ -1.1
BRF1-203ENST00000379937 HERC1Q15751 4861 aa8.18□□□□□ -1.1
BRF1-203ENST00000379937 KTN1-AS1Q86SY8 53 aa8.18□□□□□ -1.1
BRF1-203ENST00000379937 C20orf166-AS1Q96NR2 134 aa8.17□□□□□ -1.1
BRF1-203ENST00000379937 UQCR11O14957 56 aa8.13□□□□□ -1.11
BRF1-203ENST00000379937 RNF213Q63HN8 5207 aa8.12□□□□□ -1.11
BRF1-203ENST00000379937 MT1HL1P0DM35 61 aa8.11□□□□□ -1.11
BRF1-203ENST00000379937 LINC01554Q52M75 96 aa8.09□□□□□ -1.11
BRF1-203ENST00000379937 RPS29P62273 56 aaKnown RBP8.07□□□□□ -1.12
BRF1-203ENST00000379937 H3BS24 57 aa8.05□□□□□ -1.12
BRF1-203ENST00000379937 RBM12B-AS1Q9P1G2 102 aa8.05□□□□□ -1.12
BRF1-203ENST00000379937 COX6B2Q6YFQ2 88 aa8.05□□□□□ -1.12
BRF1-203ENST00000379937 A0A1B0GU33 70 aa8.03□□□□□ -1.12
BRF1-203ENST00000379937 FAT4Q6V0I7 4981 aa8.03□□□□□ -1.12
BRF1-203ENST00000379937 RPL37P61927 97 aaKnown RBP8.02□□□□□ -1.13
BRF1-203ENST00000379937 H0YAA0 97 aa7.98□□□□□ -1.13
BRF1-203ENST00000379937 P0C880 135 aa7.95□□□□□ -1.14
BRF1-203ENST00000379937 PCLOQ9Y6V0 5065 aa7.95□□□□□ -1.14
BRF1-203ENST00000379937 S4R3F8 94 aa7.94□□□□□ -1.14
BRF1-203ENST00000379937 SPINT4Q6UDR6 99 aa7.92□□□□□ -1.14
BRF1-203ENST00000379937 H1FX-AS1Q4G0G2 97 aa7.86□□□□□ -1.15
BRF1-203ENST00000379937 CSAG1Q6PB30 78 aa7.86□□□□□ -1.15
BRF1-203ENST00000379937 UBR4Q5T4S7 5183 aa7.86□□□□□ -1.15
BRF1-203ENST00000379937 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
BRF1-203ENST00000379937 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
BRF1-203ENST00000379937 KRTAP4-1Q9BYQ7 146 aa7.75□□□□□ -1.17
BRF1-203ENST00000379937 KRTAP10-6P60371 365 aaPredicted RBP7.7□□□□□ -1.18
BRF1-203ENST00000379937 C10orf95Q9H7T3 257 aa7.7□□□□□ -1.18
BRF1-203ENST00000379937 K7ERS5 55 aa7.68□□□□□ -1.18
BRF1-203ENST00000379937 TPRXLQ17RH7 258 aa7.65□□□□□ -1.18
BRF1-203ENST00000379937 M0QZ58 72 aa7.64□□□□□ -1.19
BRF1-203ENST00000379937 KRTAP3-2Q9BYR7 98 aa7.63□□□□□ -1.19
BRF1-203ENST00000379937 LORP23490 312 aaPredicted RBP7.62□□□□□ -1.19
BRF1-203ENST00000379937 BIRC6Q9NR09 4857 aa7.61□□□□□ -1.19
BRF1-203ENST00000379937 R4GN34 69 aa7.58□□□□□ -1.2
BRF1-203ENST00000379937 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
BRF1-203ENST00000379937 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
BRF1-203ENST00000379937 HMCN2Q8NDA2 5059 aa7.57□□□□□ -1.2
BRF1-203ENST00000379937 M0R2T5 61 aa7.53□□□□□ -1.2
BRF1-203ENST00000379937 KRTAP25-1Q3LHN0 102 aa7.43□□□□□ -1.22
BRF1-203ENST00000379937 MUC17Q685J3 4493 aa7.42□□□□□ -1.22
BRF1-203ENST00000379937 FSIP2Q5CZC0 6907 aa7.41□□□□□ -1.22
BRF1-203ENST00000379937 ROMO1P60602 79 aa7.37□□□□□ -1.23
BRF1-203ENST00000379937 A0A0A0MQY5 61 aa7.35□□□□□ -1.23
BRF1-203ENST00000379937 KRTAP12-1P59990 96 aa7.35□□□□□ -1.23
BRF1-203ENST00000379937 CAMK2N1Q7Z7J9 78 aa7.32□□□□□ -1.24
BRF1-203ENST00000379937 USH2AO75445 5202 aa7.26□□□□□ -1.25
BRF1-203ENST00000379937 FLGP20930 4061 aaPredicted RBP7.06□□□□□ -1.28
BRF1-203ENST00000379937 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
BRF1-203ENST00000379937 KRTAP19-2Q3LHN2 52 aa7.04□□□□□ -1.28
BRF1-203ENST00000379937 KMT2DO14686 5537 aa6.92□□□□□ -1.3
BRF1-203ENST00000379937 LCE2CQ5TA81 110 aa6.9□□□□□ -1.3
BRF1-203ENST00000379937 MT1HP80294 61 aa6.86□□□□□ -1.31
BRF1-203ENST00000379937 NDUFAF8A1L188 74 aa6.85□□□□□ -1.31
BRF1-203ENST00000379937 PLAC4Q8WY50 150 aa6.8□□□□□ -1.32
BRF1-203ENST00000379937 MT1FP04733 61 aa6.8□□□□□ -1.32
BRF1-203ENST00000379937 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
BRF1-203ENST00000379937 MT2AP02795 61 aa6.71□□□□□ -1.34
BRF1-203ENST00000379937 KRTAP19-1Q8IUB9 90 aa6.68□□□□□ -1.34
BRF1-203ENST00000379937 TNP1P09430 55 aa6.65□□□□□ -1.35
BRF1-203ENST00000379937 KRTAP9-8Q9BYQ0 159 aa6.58□□□□□ -1.36
BRF1-203ENST00000379937 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
BRF1-203ENST00000379937 LUZP6Q538Z0 58 aa6.46□□□□□ -1.38
BRF1-203ENST00000379937 SPRR2GQ9BYE4 73 aa6.42□□□□□ -1.38
BRF1-203ENST00000379937 DSTQ03001 7570 aaKnown RBP6.42□□□□□ -1.38
BRF1-203ENST00000379937 PP632Q6XCG6 107 aa6.4□□□□□ -1.38
BRF1-203ENST00000379937 MT1BP07438 61 aa6.34□□□□□ -1.39
BRF1-203ENST00000379937 KRTAP10-7P60409 375 aaPredicted RBP6.33□□□□□ -1.4
BRF1-203ENST00000379937 OBSCNQ5VST9 7968 aa6.32□□□□□ -1.4
BRF1-203ENST00000379937 LCE2BO14633 110 aa6.28□□□□□ -1.4
BRF1-203ENST00000379937 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
BRF1-203ENST00000379937 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
BRF1-203ENST00000379937 MT1XP80297 61 aa6.27□□□□□ -1.41
BRF1-203ENST00000379937 KRTAP9-3Q9BYQ3 159 aa6.25□□□□□ -1.41
BRF1-203ENST00000379937 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
BRF1-203ENST00000379937 SSPOA2VEC9 5147 aa6.19□□□□□ -1.42
BRF1-203ENST00000379937 KRTAP10-12P60413 245 aa6.19□□□□□ -1.42
BRF1-203ENST00000379937 MUC12Q9UKN1 5478 aa6.17□□□□□ -1.42
BRF1-203ENST00000379937 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
BRF1-203ENST00000379937 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
BRF1-203ENST00000379937 KRTAP19-8Q3LI54 63 aa6.07□□□□□ -1.44
BRF1-203ENST00000379937 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
BRF1-203ENST00000379937 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
BRF1-203ENST00000379937 PRO2289Q9P1D8 64 aa6.02□□□□□ -1.45
BRF1-203ENST00000379937 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
BRF1-203ENST00000379937 LCE2AQ5TA79 106 aaPredicted RBP5.99□□□□□ -1.45
BRF1-203ENST00000379937 KRTAP19-5Q3LI72 72 aa5.99□□□□□ -1.45
BRF1-203ENST00000379937 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
BRF1-203ENST00000379937 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
BRF1-203ENST00000379937 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.47
BRF1-203ENST00000379937 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
BRF1-203ENST00000379937 MACF1Q9UPN3 7388 aaKnown RBP5.84□□□□□ -1.48
BRF1-203ENST00000379937 KRTAP4-3Q9BYR4 195 aa5.68□□□□□ -1.5
BRF1-203ENST00000379937 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
BRF1-203ENST00000379937 LOC100996750A0A140TA64 210 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms