RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 SEC61GP60059 68 aa7.64□□□□□ -1.19
SNX2-201ENST00000379516 LCA10Q71F78 164 aa7.64□□□□□ -1.19
SNX2-201ENST00000379516 SEC61BP60468 96 aaKnown RBP7.61□□□□□ -1.19
SNX2-201ENST00000379516 SVIPQ8NHG7 77 aa7.61□□□□□ -1.19
SNX2-201ENST00000379516 CDC42SE1Q9NRR8 79 aa7.6□□□□□ -1.19
SNX2-201ENST00000379516 RBM12B-AS1Q9P1G2 102 aa7.58□□□□□ -1.2
SNX2-201ENST00000379516 S4R3F8 94 aa7.58□□□□□ -1.2
SNX2-201ENST00000379516 H1FX-AS1Q4G0G2 97 aa7.57□□□□□ -1.2
SNX2-201ENST00000379516 KRTAP3-3Q9BYR6 98 aa7.57□□□□□ -1.2
SNX2-201ENST00000379516 UQCR11O14957 56 aa7.55□□□□□ -1.2
SNX2-201ENST00000379516 PCLOQ9Y6V0 5065 aa7.53□□□□□ -1.2
SNX2-201ENST00000379516 MIR22HGQ0VDD5 57 aa7.49□□□□□ -1.21
SNX2-201ENST00000379516 SPATA8Q6RVD6 105 aa7.48□□□□□ -1.21
SNX2-201ENST00000379516 KRTAP4-1Q9BYQ7 146 aa7.48□□□□□ -1.21
SNX2-201ENST00000379516 MUC17Q685J3 4493 aa7.47□□□□□ -1.21
SNX2-201ENST00000379516 HERC1Q15751 4861 aa7.46□□□□□ -1.22
SNX2-201ENST00000379516 A0A1B0GU33 70 aa7.45□□□□□ -1.22
SNX2-201ENST00000379516 PMAIP1Q13794 54 aa7.42□□□□□ -1.22
SNX2-201ENST00000379516 HMCN2Q8NDA2 5059 aa7.39□□□□□ -1.23
SNX2-201ENST00000379516 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
SNX2-201ENST00000379516 KRTAP10-6P60371 365 aaPredicted RBP7.37□□□□□ -1.23
SNX2-201ENST00000379516 H0YAA0 97 aa7.36□□□□□ -1.23
SNX2-201ENST00000379516 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
SNX2-201ENST00000379516 ADM2Q7Z4H4 148 aa7.31□□□□□ -1.24
SNX2-201ENST00000379516 MUC2Q02817 5179 aa7.31□□□□□ -1.24
SNX2-201ENST00000379516 A6NN06 94 aa7.3□□□□□ -1.24
SNX2-201ENST00000379516 P0C880 135 aa7.3□□□□□ -1.24
SNX2-201ENST00000379516 KRTAP19-2Q3LHN2 52 aa7.28□□□□□ -1.24
SNX2-201ENST00000379516 KRTAP13-4Q3LI77 160 aa7.22□□□□□ -1.25
SNX2-201ENST00000379516 A0A0D9SG42 100 aa7.15□□□□□ -1.26
SNX2-201ENST00000379516 KTN1-AS1Q86SY8 53 aa7.15□□□□□ -1.27
SNX2-201ENST00000379516 FLGP20930 4061 aaPredicted RBP7.11□□□□□ -1.27
SNX2-201ENST00000379516 K7ERS5 55 aa7.1□□□□□ -1.27
SNX2-201ENST00000379516 LCE2DQ5TA82 110 aaPredicted RBP7.09□□□□□ -1.28
SNX2-201ENST00000379516 M0QZ58 72 aa7.08□□□□□ -1.28
SNX2-201ENST00000379516 UBR4Q5T4S7 5183 aa7.07□□□□□ -1.28
SNX2-201ENST00000379516 RNF213Q63HN8 5207 aa7.04□□□□□ -1.28
SNX2-201ENST00000379516 LCE2CQ5TA81 110 aa7.02□□□□□ -1.29
SNX2-201ENST00000379516 R4GN34 69 aa7.02□□□□□ -1.29
SNX2-201ENST00000379516 LORP23490 312 aaPredicted RBP7□□□□□ -1.29
SNX2-201ENST00000379516 KRTAP12-2P59991 146 aa6.96□□□□□ -1.3
SNX2-201ENST00000379516 FAT4Q6V0I7 4981 aa6.96□□□□□ -1.3
SNX2-201ENST00000379516 LINC01554Q52M75 96 aa6.95□□□□□ -1.3
SNX2-201ENST00000379516 SPINT4Q6UDR6 99 aa6.95□□□□□ -1.3
SNX2-201ENST00000379516 PRAC1Q96KF2 57 aa6.95□□□□□ -1.3
SNX2-201ENST00000379516 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
SNX2-201ENST00000379516 M0R2T5 61 aa6.88□□□□□ -1.31
SNX2-201ENST00000379516 MT1HP80294 61 aa6.87□□□□□ -1.31
SNX2-201ENST00000379516 ROMO1P60602 79 aa6.85□□□□□ -1.31
SNX2-201ENST00000379516 CRIPTQ9P021 101 aa6.79□□□□□ -1.32
SNX2-201ENST00000379516 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
SNX2-201ENST00000379516 MT2AP02795 61 aa6.65□□□□□ -1.34
SNX2-201ENST00000379516 KRTAP9-8Q9BYQ0 159 aa6.65□□□□□ -1.35
SNX2-201ENST00000379516 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
SNX2-201ENST00000379516 MT1FP04733 61 aa6.63□□□□□ -1.35
SNX2-201ENST00000379516 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
SNX2-201ENST00000379516 CAMK2N1Q7Z7J9 78 aa6.61□□□□□ -1.35
SNX2-201ENST00000379516 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
SNX2-201ENST00000379516 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
SNX2-201ENST00000379516 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
SNX2-201ENST00000379516 KRTAP19-8Q3LI54 63 aa6.4□□□□□ -1.39
SNX2-201ENST00000379516 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.39
SNX2-201ENST00000379516 KRTAP9-3Q9BYQ3 159 aa6.39□□□□□ -1.39
SNX2-201ENST00000379516 MT1BP07438 61 aa6.32□□□□□ -1.4
SNX2-201ENST00000379516 TNP1P09430 55 aa6.31□□□□□ -1.4
SNX2-201ENST00000379516 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
SNX2-201ENST00000379516 LCE2BO14633 110 aa6.19□□□□□ -1.42
SNX2-201ENST00000379516 KRTAP10-5P60370 271 aa6.17□□□□□ -1.42
SNX2-201ENST00000379516 MT1XP80297 61 aa6.17□□□□□ -1.42
SNX2-201ENST00000379516 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
SNX2-201ENST00000379516 PRO2289Q9P1D8 64 aa6.07□□□□□ -1.44
SNX2-201ENST00000379516 USH2AO75445 5202 aa6.05□□□□□ -1.44
SNX2-201ENST00000379516 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
SNX2-201ENST00000379516 KRTAP10-7P60409 375 aaPredicted RBP5.97□□□□□ -1.45
SNX2-201ENST00000379516 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
SNX2-201ENST00000379516 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
SNX2-201ENST00000379516 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
SNX2-201ENST00000379516 SSPOA2VEC9 5147 aa5.77□□□□□ -1.49
SNX2-201ENST00000379516 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
SNX2-201ENST00000379516 KMT2DO14686 5537 aa5.73□□□□□ -1.49
SNX2-201ENST00000379516 KRTAP19-6Q3LI70 58 aa5.71□□□□□ -1.5
SNX2-201ENST00000379516 FSIP2Q5CZC0 6907 aa5.71□□□□□ -1.5
SNX2-201ENST00000379516 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
SNX2-201ENST00000379516 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
SNX2-201ENST00000379516 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
SNX2-201ENST00000379516 NDUFAF8A1L188 74 aa5.65□□□□□ -1.5
SNX2-201ENST00000379516 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
SNX2-201ENST00000379516 LUZP6Q538Z0 58 aa5.58□□□□□ -1.52
SNX2-201ENST00000379516 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
SNX2-201ENST00000379516 FCGBPQ9Y6R7 5405 aaPredicted RBP5.49□□□□□ -1.53
SNX2-201ENST00000379516 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
SNX2-201ENST00000379516 MT1EP04732 61 aa5.39□□□□□ -1.55
SNX2-201ENST00000379516 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
SNX2-201ENST00000379516 H3BS24 57 aa5.35□□□□□ -1.55
SNX2-201ENST00000379516 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
SNX2-201ENST00000379516 KRTAP4-6Q9BYQ5 205 aa5.33□□□□□ -1.56
SNX2-201ENST00000379516 MT1LQ93083 61 aa5.32□□□□□ -1.56
SNX2-201ENST00000379516 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
SNX2-201ENST00000379516 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
SNX2-201ENST00000379516 CRCT1Q9UGL9 99 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms