RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 A0A0A0MQY5 61 aa8.82□□□□□ -1
PCDHA1-201ENST00000378133 COX6B2Q6YFQ2 88 aa8.77□□□□□ -1.01
PCDHA1-201ENST00000378133 NDUFAF8A1L188 74 aa8.74□□□□□ -1.01
PCDHA1-201ENST00000378133 HSPG2P98160 4391 aa8.73□□□□□ -1.01
PCDHA1-201ENST00000378133 EPPK1P58107 5090 aaKnown RBP8.72□□□□□ -1.01
PCDHA1-201ENST00000378133 RYR1P21817 5038 aa8.69□□□□□ -1.02
PCDHA1-201ENST00000378133 SPINT4Q6UDR6 99 aa8.69□□□□□ -1.02
PCDHA1-201ENST00000378133 KRTAP17-1Q9BYP8 105 aa8.68□□□□□ -1.02
PCDHA1-201ENST00000378133 LRP1Q07954 4544 aaKnown RBP8.66□□□□□ -1.02
PCDHA1-201ENST00000378133 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
PCDHA1-201ENST00000378133 Q5VSD8 79 aa8.63□□□□□ -1.03
PCDHA1-201ENST00000378133 KIAA1109Q2LD37 5005 aa8.63□□□□□ -1.03
PCDHA1-201ENST00000378133 RPL37P61927 97 aaKnown RBP8.61□□□□□ -1.03
PCDHA1-201ENST00000378133 TNXBP22105 4242 aa8.59□□□□□ -1.03
PCDHA1-201ENST00000378133 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.03
PCDHA1-201ENST00000378133 A0A0D9SG42 100 aa8.56□□□□□ -1.04
PCDHA1-201ENST00000378133 KRTAP10-6P60371 365 aaPredicted RBP8.56□□□□□ -1.04
PCDHA1-201ENST00000378133 KRTAP15-1Q3LI76 137 aa8.55□□□□□ -1.04
PCDHA1-201ENST00000378133 KRTAP10-8P60410 259 aa8.54□□□□□ -1.04
PCDHA1-201ENST00000378133 TPRXLQ17RH7 258 aa8.54□□□□□ -1.04
PCDHA1-201ENST00000378133 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
PCDHA1-201ENST00000378133 MYCBP2O75592 4640 aa8.52□□□□□ -1.05
PCDHA1-201ENST00000378133 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
PCDHA1-201ENST00000378133 KRTAP3-2Q9BYR7 98 aa8.45□□□□□ -1.06
PCDHA1-201ENST00000378133 XP32Q5T750 250 aa8.45□□□□□ -1.06
PCDHA1-201ENST00000378133 C10orf95Q9H7T3 257 aa8.45□□□□□ -1.06
PCDHA1-201ENST00000378133 KRTAP4-5Q9BYR2 181 aa8.4□□□□□ -1.06
PCDHA1-201ENST00000378133 S4R3F8 94 aa8.38□□□□□ -1.07
PCDHA1-201ENST00000378133 MT1HL1P0DM35 61 aa8.33□□□□□ -1.08
PCDHA1-201ENST00000378133 BIRC6Q9NR09 4857 aa8.32□□□□□ -1.08
PCDHA1-201ENST00000378133 KRTAP12-2P59991 146 aa8.3□□□□□ -1.08
PCDHA1-201ENST00000378133 LPAP08519 4548 aa8.27□□□□□ -1.09
PCDHA1-201ENST00000378133 ABCA13Q86UQ4 5058 aa8.25□□□□□ -1.09
PCDHA1-201ENST00000378133 HERC2O95714 4834 aa8.24□□□□□ -1.09
PCDHA1-201ENST00000378133 LUZP6Q538Z0 58 aa8.23□□□□□ -1.09
PCDHA1-201ENST00000378133 KRTAP12-1P59990 96 aa8.2□□□□□ -1.1
PCDHA1-201ENST00000378133 LRP2P98164 4655 aa8.2□□□□□ -1.1
PCDHA1-201ENST00000378133 M0QZ58 72 aa8.06□□□□□ -1.12
PCDHA1-201ENST00000378133 J3QL48 77 aa8.01□□□□□ -1.13
PCDHA1-201ENST00000378133 PCLOQ9Y6V0 5065 aa7.97□□□□□ -1.13
PCDHA1-201ENST00000378133 R4GN34 69 aa7.82□□□□□ -1.16
PCDHA1-201ENST00000378133 MUC17Q685J3 4493 aa7.79□□□□□ -1.16
PCDHA1-201ENST00000378133 PLAC4Q8WY50 150 aa7.79□□□□□ -1.16
PCDHA1-201ENST00000378133 SEC61BP60468 96 aaKnown RBP7.78□□□□□ -1.16
PCDHA1-201ENST00000378133 HERC1Q15751 4861 aa7.77□□□□□ -1.16
PCDHA1-201ENST00000378133 KRTAP4-1Q9BYQ7 146 aa7.74□□□□□ -1.17
PCDHA1-201ENST00000378133 LORP23490 312 aaPredicted RBP7.73□□□□□ -1.17
PCDHA1-201ENST00000378133 HMCN2Q8NDA2 5059 aa7.66□□□□□ -1.18
PCDHA1-201ENST00000378133 KRTAP19-2Q3LHN2 52 aa7.58□□□□□ -1.2
PCDHA1-201ENST00000378133 MUC2Q02817 5179 aa7.54□□□□□ -1.2
PCDHA1-201ENST00000378133 PP632Q6XCG6 107 aa7.52□□□□□ -1.21
PCDHA1-201ENST00000378133 CAMK2N1Q7Z7J9 78 aa7.49□□□□□ -1.21
PCDHA1-201ENST00000378133 FLGP20930 4061 aaPredicted RBP7.39□□□□□ -1.23
PCDHA1-201ENST00000378133 UBR4Q5T4S7 5183 aa7.35□□□□□ -1.23
PCDHA1-201ENST00000378133 RNF213Q63HN8 5207 aa7.28□□□□□ -1.24
PCDHA1-201ENST00000378133 TNP1P09430 55 aa7.23□□□□□ -1.25
PCDHA1-201ENST00000378133 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
PCDHA1-201ENST00000378133 FAT4Q6V0I7 4981 aa7.16□□□□□ -1.26
PCDHA1-201ENST00000378133 KRTAP23-1A1A580 65 aa7.15□□□□□ -1.26
PCDHA1-201ENST00000378133 SPRR5A0A1B0GTR4 108 aa7.13□□□□□ -1.27
PCDHA1-201ENST00000378133 PRO2289Q9P1D8 64 aa7.12□□□□□ -1.27
PCDHA1-201ENST00000378133 LCE2DQ5TA82 110 aaPredicted RBP7.08□□□□□ -1.28
PCDHA1-201ENST00000378133 MT1HP80294 61 aa7.01□□□□□ -1.29
PCDHA1-201ENST00000378133 SPRR2GQ9BYE4 73 aa6.99□□□□□ -1.29
PCDHA1-201ENST00000378133 M0R2T5 61 aa6.99□□□□□ -1.29
PCDHA1-201ENST00000378133 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
PCDHA1-201ENST00000378133 KRTAP10-10P60014 251 aa6.84□□□□□ -1.32
PCDHA1-201ENST00000378133 MT1FP04733 61 aa6.83□□□□□ -1.32
PCDHA1-201ENST00000378133 MT2AP02795 61 aa6.81□□□□□ -1.32
PCDHA1-201ENST00000378133 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
PCDHA1-201ENST00000378133 INE1O15225 51 aa6.78□□□□□ -1.32
PCDHA1-201ENST00000378133 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
PCDHA1-201ENST00000378133 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
PCDHA1-201ENST00000378133 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
PCDHA1-201ENST00000378133 MT1BP07438 61 aa6.61□□□□□ -1.35
PCDHA1-201ENST00000378133 KRTAP8-1Q8IUC2 63 aa6.6□□□□□ -1.35
PCDHA1-201ENST00000378133 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
PCDHA1-201ENST00000378133 MT1XP80297 61 aa6.57□□□□□ -1.36
PCDHA1-201ENST00000378133 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
PCDHA1-201ENST00000378133 KRTAP10-12P60413 245 aa6.46□□□□□ -1.38
PCDHA1-201ENST00000378133 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
PCDHA1-201ENST00000378133 KRTAP10-7P60409 375 aaPredicted RBP6.42□□□□□ -1.38
PCDHA1-201ENST00000378133 LCE2BO14633 110 aa6.35□□□□□ -1.39
PCDHA1-201ENST00000378133 USH2AO75445 5202 aa6.21□□□□□ -1.42
PCDHA1-201ENST00000378133 KMT2DO14686 5537 aa6.16□□□□□ -1.42
PCDHA1-201ENST00000378133 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.42
PCDHA1-201ENST00000378133 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
PCDHA1-201ENST00000378133 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
PCDHA1-201ENST00000378133 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
PCDHA1-201ENST00000378133 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
PCDHA1-201ENST00000378133 FSIP2Q5CZC0 6907 aa5.94□□□□□ -1.46
PCDHA1-201ENST00000378133 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
PCDHA1-201ENST00000378133 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
PCDHA1-201ENST00000378133 KRTAP19-7Q3SYF9 63 aa5.86□□□□□ -1.47
PCDHA1-201ENST00000378133 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
PCDHA1-201ENST00000378133 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
PCDHA1-201ENST00000378133 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
PCDHA1-201ENST00000378133 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
PCDHA1-201ENST00000378133 KRTAP9-2Q9BYQ4 174 aa5.8□□□□□ -1.48
PCDHA1-201ENST00000378133 FCGBPQ9Y6R7 5405 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms