RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 SPTSSBQ8NFR3 76 aa11.19□□□□□ -0.62
RNF38-205ENST00000377877 SPINK7P58062 85 aa11.14□□□□□ -0.63
RNF38-205ENST00000377877 IGKV2D-30A0A075B6S6 120 aa11.08□□□□□ -0.64
RNF38-205ENST00000377877 A6NN06 94 aa11.06□□□□□ -0.64
RNF38-205ENST00000377877 KTN1-AS1Q86SY8 53 aa11.05□□□□□ -0.64
RNF38-205ENST00000377877 A0A1B0GU69 56 aa11.01□□□□□ -0.65
RNF38-205ENST00000377877 C7orf65Q6ZTY9 151 aa11□□□□□ -0.65
RNF38-205ENST00000377877 SEC61BP60468 96 aaKnown RBP10.96□□□□□ -0.65
RNF38-205ENST00000377877 MUC17Q685J3 4493 aa10.96□□□□□ -0.66
RNF38-205ENST00000377877 SEC61GP60059 68 aa10.96□□□□□ -0.66
RNF38-205ENST00000377877 KRTAP4-1Q9BYQ7 146 aa10.9□□□□□ -0.66
RNF38-205ENST00000377877 SPATA8Q6RVD6 105 aa10.85□□□□□ -0.67
RNF38-205ENST00000377877 UQCR11O14957 56 aa10.83□□□□□ -0.68
RNF38-205ENST00000377877 MUC2Q02817 5179 aa10.79□□□□□ -0.68
RNF38-205ENST00000377877 MIR22HGQ0VDD5 57 aa10.79□□□□□ -0.68
RNF38-205ENST00000377877 UBR4Q5T4S7 5183 aa10.77□□□□□ -0.68
RNF38-205ENST00000377877 KRTAP3-1Q9BYR8 98 aa10.73□□□□□ -0.69
RNF38-205ENST00000377877 RBM12B-AS1Q9P1G2 102 aa10.72□□□□□ -0.69
RNF38-205ENST00000377877 COX6B2Q6YFQ2 88 aa10.67□□□□□ -0.7
RNF38-205ENST00000377877 RNF213Q63HN8 5207 aa10.66□□□□□ -0.7
RNF38-205ENST00000377877 KRTAP19-2Q3LHN2 52 aa10.55□□□□□ -0.72
RNF38-205ENST00000377877 H1FX-AS1Q4G0G2 97 aa10.46□□□□□ -0.73
RNF38-205ENST00000377877 PRAC1Q96KF2 57 aa10.46□□□□□ -0.73
RNF38-205ENST00000377877 ADM2Q7Z4H4 148 aa10.42□□□□□ -0.74
RNF38-205ENST00000377877 A0A1B0GU33 70 aa10.41□□□□□ -0.74
RNF38-205ENST00000377877 H0YAA0 97 aa10.4□□□□□ -0.74
RNF38-205ENST00000377877 LCE2CQ5TA81 110 aa10.37□□□□□ -0.75
RNF38-205ENST00000377877 FLGP20930 4061 aaPredicted RBP10.35□□□□□ -0.75
RNF38-205ENST00000377877 KRTAP3-3Q9BYR6 98 aa10.34□□□□□ -0.75
RNF38-205ENST00000377877 S4R3F8 94 aa10.34□□□□□ -0.75
RNF38-205ENST00000377877 FAT4Q6V0I7 4981 aa10.33□□□□□ -0.76
RNF38-205ENST00000377877 LINC01554Q52M75 96 aa10.21□□□□□ -0.78
RNF38-205ENST00000377877 CSAG1Q6PB30 78 aa10.21□□□□□ -0.78
RNF38-205ENST00000377877 K7ERS5 55 aa10.15□□□□□ -0.78
RNF38-205ENST00000377877 MT1HP80294 61 aa10.14□□□□□ -0.79
RNF38-205ENST00000377877 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
RNF38-205ENST00000377877 M0R2T5 61 aa10□□□□□ -0.81
RNF38-205ENST00000377877 KRTAP25-1Q3LHN0 102 aa9.99□□□□□ -0.81
RNF38-205ENST00000377877 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
RNF38-205ENST00000377877 KRTAP13-4Q3LI77 160 aa9.9□□□□□ -0.82
RNF38-205ENST00000377877 ROMO1P60602 79 aa9.87□□□□□ -0.83
RNF38-205ENST00000377877 LCE2AQ5TA79 106 aaPredicted RBP9.87□□□□□ -0.83
RNF38-205ENST00000377877 P0C880 135 aa9.86□□□□□ -0.83
RNF38-205ENST00000377877 A0A0D9SG42 100 aa9.84□□□□□ -0.83
RNF38-205ENST00000377877 KRTAP9-8Q9BYQ0 159 aa9.77□□□□□ -0.85
RNF38-205ENST00000377877 LORP23490 312 aaPredicted RBP9.74□□□□□ -0.85
RNF38-205ENST00000377877 MT2AP02795 61 aa9.7□□□□□ -0.86
RNF38-205ENST00000377877 CRIPTQ9P021 101 aa9.69□□□□□ -0.86
RNF38-205ENST00000377877 MT1FP04733 61 aa9.66□□□□□ -0.86
RNF38-205ENST00000377877 M0QZ58 72 aa9.63□□□□□ -0.87
RNF38-205ENST00000377877 KRTAP10-10P60014 251 aa9.61□□□□□ -0.87
RNF38-205ENST00000377877 KRTAP12-2P59991 146 aa9.6□□□□□ -0.87
RNF38-205ENST00000377877 KRTAP12-1P59990 96 aa9.57□□□□□ -0.88
RNF38-205ENST00000377877 SPINT4Q6UDR6 99 aa9.53□□□□□ -0.88
RNF38-205ENST00000377877 R4GN34 69 aa9.52□□□□□ -0.89
RNF38-205ENST00000377877 KRTAP19-1Q8IUB9 90 aa9.43□□□□□ -0.9
RNF38-205ENST00000377877 KRTAP9-3Q9BYQ3 159 aa9.41□□□□□ -0.9
RNF38-205ENST00000377877 C10orf95Q9H7T3 257 aa9.39□□□□□ -0.91
RNF38-205ENST00000377877 SPRR2GQ9BYE4 73 aa9.38□□□□□ -0.91
RNF38-205ENST00000377877 H3BS24 57 aa9.22□□□□□ -0.93
RNF38-205ENST00000377877 LCE2BO14633 110 aa9.21□□□□□ -0.94
RNF38-205ENST00000377877 KRTAP19-8Q3LI54 63 aa9.17□□□□□ -0.94
RNF38-205ENST00000377877 MT1BP07438 61 aa9.1□□□□□ -0.95
RNF38-205ENST00000377877 KRTAP15-1Q3LI76 137 aa9.08□□□□□ -0.96
RNF38-205ENST00000377877 USH2AO75445 5202 aa9.05□□□□□ -0.96
RNF38-205ENST00000377877 LCE2DQ5TA82 110 aaPredicted RBP9.03□□□□□ -0.96
RNF38-205ENST00000377877 PLAC4Q8WY50 150 aa9.01□□□□□ -0.97
RNF38-205ENST00000377877 KRTAP9-2Q9BYQ4 174 aa8.98□□□□□ -0.97
RNF38-205ENST00000377877 CAMK2N1Q7Z7J9 78 aa8.89□□□□□ -0.99
RNF38-205ENST00000377877 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
RNF38-205ENST00000377877 PP632Q6XCG6 107 aa8.81□□□□□ -1
RNF38-205ENST00000377877 NDUFAF8A1L188 74 aa8.81□□□□□ -1
RNF38-205ENST00000377877 SSPOA2VEC9 5147 aa8.8□□□□□ -1
RNF38-205ENST00000377877 MT1XP80297 61 aa8.76□□□□□ -1.01
RNF38-205ENST00000377877 KRTAP10-5P60370 271 aa8.75□□□□□ -1.01
RNF38-205ENST00000377877 KRTAP19-6Q3LI70 58 aa8.61□□□□□ -1.03
RNF38-205ENST00000377877 PRO2289Q9P1D8 64 aa8.58□□□□□ -1.04
RNF38-205ENST00000377877 TNP1P09430 55 aa8.57□□□□□ -1.04
RNF38-205ENST00000377877 CRCT1Q9UGL9 99 aa8.57□□□□□ -1.04
RNF38-205ENST00000377877 KRTAP23-1A1A580 65 aa8.54□□□□□ -1.04
RNF38-205ENST00000377877 KRTAP9-6A0A140TA67 174 aa8.49□□□□□ -1.05
RNF38-205ENST00000377877 FCGBPQ9Y6R7 5405 aaPredicted RBP8.44□□□□□ -1.06
RNF38-205ENST00000377877 KRTAP10-7P60409 375 aaPredicted RBP8.43□□□□□ -1.06
RNF38-205ENST00000377877 LUZP6Q538Z0 58 aa8.35□□□□□ -1.07
RNF38-205ENST00000377877 KRTAP10-12P60413 245 aa8.28□□□□□ -1.08
RNF38-205ENST00000377877 KMT2DO14686 5537 aa8.24□□□□□ -1.09
RNF38-205ENST00000377877 KRTAP4-8A0A0G2JLE6 195 aa8.19□□□□□ -1.1
RNF38-205ENST00000377877 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
RNF38-205ENST00000377877 LCE3AQ5TA76 89 aa8.17□□□□□ -1.1
RNF38-205ENST00000377877 SPRR5A0A1B0GTR4 108 aa8.16□□□□□ -1.1
RNF38-205ENST00000377877 MACF1Q9UPN3 7388 aaKnown RBP8.06□□□□□ -1.12
RNF38-205ENST00000377877 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
RNF38-205ENST00000377877 KRTAP8-1Q8IUC2 63 aa7.95□□□□□ -1.14
RNF38-205ENST00000377877 A0A0A0MQY5 61 aa7.94□□□□□ -1.14
RNF38-205ENST00000377877 SYNE2Q8WXH0 6885 aaKnown RBP7.91□□□□□ -1.14
RNF38-205ENST00000377877 KRTAP19-5Q3LI72 72 aa7.89□□□□□ -1.15
RNF38-205ENST00000377877 KRTAP19-7Q3SYF9 63 aa7.83□□□□□ -1.16
RNF38-205ENST00000377877 KRTAP12-3P60328 96 aa7.82□□□□□ -1.16
RNF38-205ENST00000377877 KRTAP9-7A8MTY7 169 aa7.7□□□□□ -1.18
RNF38-205ENST00000377877 MT1EP04732 61 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms