RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 HYDINQ4G0P3 5121 aa9.84□□□□□ -0.83
GPC5-201ENST00000377067 SMR3BP02814 79 aaPredicted RBP9.81□□□□□ -0.84
GPC5-201ENST00000377067 A0A0A0MQY5 61 aa9.81□□□□□ -0.84
GPC5-201ENST00000377067 SACSQ9NZJ4 4579 aa9.79□□□□□ -0.84
GPC5-201ENST00000377067 S4R3F8 94 aa9.77□□□□□ -0.85
GPC5-201ENST00000377067 KRTAP12-2P59991 146 aa9.75□□□□□ -0.85
GPC5-201ENST00000377067 PKHD1P08F94 4074 aa9.71□□□□□ -0.86
GPC5-201ENST00000377067 PKHD1L1Q86WI1 4243 aa9.68□□□□□ -0.86
GPC5-201ENST00000377067 FAT1Q14517 4588 aa9.67□□□□□ -0.86
GPC5-201ENST00000377067 KRTAP10-8P60410 259 aa9.64□□□□□ -0.87
GPC5-201ENST00000377067 KRTAP12-1P59990 96 aa9.59□□□□□ -0.87
GPC5-201ENST00000377067 KMT2CQ8NEZ4 4911 aaKnown RBP9.56□□□□□ -0.88
GPC5-201ENST00000377067 DYNC1H1Q14204 4646 aaKnown RBP9.55□□□□□ -0.88
GPC5-201ENST00000377067 XP32Q5T750 250 aa9.52□□□□□ -0.88
GPC5-201ENST00000377067 APOBP04114 4563 aaKnown RBP9.51□□□□□ -0.89
GPC5-201ENST00000377067 HSPG2P98160 4391 aa9.48□□□□□ -0.89
GPC5-201ENST00000377067 KRTAP10-4P60372 401 aaPredicted RBP9.47□□□□□ -0.89
GPC5-201ENST00000377067 LRP1Q07954 4544 aaKnown RBP9.4□□□□□ -0.9
GPC5-201ENST00000377067 MYCBP2O75592 4640 aa9.4□□□□□ -0.9
GPC5-201ENST00000377067 FAT3Q8TDW7 4589 aa9.4□□□□□ -0.9
GPC5-201ENST00000377067 RYR2Q92736 4967 aa9.35□□□□□ -0.91
GPC5-201ENST00000377067 LUZP6Q538Z0 58 aa9.34□□□□□ -0.91
GPC5-201ENST00000377067 RYR3Q15413 4870 aa9.29□□□□□ -0.92
GPC5-201ENST00000377067 M0QZ58 72 aa9.26□□□□□ -0.93
GPC5-201ENST00000377067 PLAC4Q8WY50 150 aa9.21□□□□□ -0.94
GPC5-201ENST00000377067 TNXBP22105 4242 aa9.19□□□□□ -0.94
GPC5-201ENST00000377067 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
GPC5-201ENST00000377067 LPAP08519 4548 aa9.15□□□□□ -0.94
GPC5-201ENST00000377067 R4GN34 69 aa9.04□□□□□ -0.96
GPC5-201ENST00000377067 EPPK1P58107 5090 aaKnown RBP9□□□□□ -0.97
GPC5-201ENST00000377067 KIAA1109Q2LD37 5005 aa8.99□□□□□ -0.97
GPC5-201ENST00000377067 LRP2P98164 4655 aa8.94□□□□□ -0.98
GPC5-201ENST00000377067 LORP23490 312 aaPredicted RBP8.91□□□□□ -0.98
GPC5-201ENST00000377067 Q5VSD8 79 aa8.88□□□□□ -0.99
GPC5-201ENST00000377067 KRTAP17-1Q9BYP8 105 aa8.83□□□□□ -1
GPC5-201ENST00000377067 RYR1P21817 5038 aa8.81□□□□□ -1
GPC5-201ENST00000377067 MT1HL1P0DM35 61 aa8.71□□□□□ -1.01
GPC5-201ENST00000377067 PP632Q6XCG6 107 aa8.7□□□□□ -1.02
GPC5-201ENST00000377067 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
GPC5-201ENST00000377067 KRTAP4-5Q9BYR2 181 aa8.61□□□□□ -1.03
GPC5-201ENST00000377067 SEC61BP60468 96 aaKnown RBP8.53□□□□□ -1.04
GPC5-201ENST00000377067 ABCA13Q86UQ4 5058 aa8.49□□□□□ -1.05
GPC5-201ENST00000377067 MUC17Q685J3 4493 aa8.41□□□□□ -1.06
GPC5-201ENST00000377067 HERC2O95714 4834 aa8.4□□□□□ -1.06
GPC5-201ENST00000377067 KRTAP4-1Q9BYQ7 146 aa8.39□□□□□ -1.07
GPC5-201ENST00000377067 SPRR5A0A1B0GTR4 108 aa8.37□□□□□ -1.07
GPC5-201ENST00000377067 TNP1P09430 55 aa8.36□□□□□ -1.07
GPC5-201ENST00000377067 BIRC6Q9NR09 4857 aa8.34□□□□□ -1.07
GPC5-201ENST00000377067 J3QL48 77 aa8.3□□□□□ -1.08
GPC5-201ENST00000377067 PCLOQ9Y6V0 5065 aa8.26□□□□□ -1.09
GPC5-201ENST00000377067 KRTAP19-2Q3LHN2 52 aa8.2□□□□□ -1.1
GPC5-201ENST00000377067 KRTAP23-1A1A580 65 aa8.16□□□□□ -1.1
GPC5-201ENST00000377067 HERC1Q15751 4861 aa8.15□□□□□ -1.1
GPC5-201ENST00000377067 PRO2289Q9P1D8 64 aa8.14□□□□□ -1.11
GPC5-201ENST00000377067 MUC2Q02817 5179 aa8.05□□□□□ -1.12
GPC5-201ENST00000377067 FLGP20930 4061 aaPredicted RBP7.95□□□□□ -1.14
GPC5-201ENST00000377067 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
GPC5-201ENST00000377067 INE1O15225 51 aa7.82□□□□□ -1.16
GPC5-201ENST00000377067 HMCN2Q8NDA2 5059 aa7.8□□□□□ -1.16
GPC5-201ENST00000377067 RNF213Q63HN8 5207 aa7.76□□□□□ -1.17
GPC5-201ENST00000377067 UBR4Q5T4S7 5183 aa7.74□□□□□ -1.17
GPC5-201ENST00000377067 KRTAP19-1Q8IUB9 90 aa7.71□□□□□ -1.18
GPC5-201ENST00000377067 SPRR2GQ9BYE4 73 aa7.68□□□□□ -1.18
GPC5-201ENST00000377067 FAT4Q6V0I7 4981 aa7.64□□□□□ -1.19
GPC5-201ENST00000377067 KRTAP8-1Q8IUC2 63 aa7.6□□□□□ -1.19
GPC5-201ENST00000377067 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
GPC5-201ENST00000377067 KRTAP12-3P60328 96 aa7.47□□□□□ -1.21
GPC5-201ENST00000377067 M0R2T5 61 aa7.46□□□□□ -1.21
GPC5-201ENST00000377067 KRTAP10-12P60413 245 aa7.42□□□□□ -1.22
GPC5-201ENST00000377067 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
GPC5-201ENST00000377067 MT1FP04733 61 aa7.37□□□□□ -1.23
GPC5-201ENST00000377067 KRTAP10-5P60370 271 aa7.34□□□□□ -1.23
GPC5-201ENST00000377067 MT1XP80297 61 aa7.31□□□□□ -1.24
GPC5-201ENST00000377067 MT2AP02795 61 aa7.3□□□□□ -1.24
GPC5-201ENST00000377067 MT1HP80294 61 aa7.24□□□□□ -1.25
GPC5-201ENST00000377067 KRTAP10-7P60409 375 aaPredicted RBP7.23□□□□□ -1.25
GPC5-201ENST00000377067 MT1BP07438 61 aa7.22□□□□□ -1.25
GPC5-201ENST00000377067 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
GPC5-201ENST00000377067 KRTAP9-8Q9BYQ0 159 aa7.16□□□□□ -1.26
GPC5-201ENST00000377067 LCE3CQ5T5A8 94 aa7.04□□□□□ -1.28
GPC5-201ENST00000377067 KRTAP19-5Q3LI72 72 aa7.01□□□□□ -1.29
GPC5-201ENST00000377067 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
GPC5-201ENST00000377067 KMT2DO14686 5537 aa6.89□□□□□ -1.31
GPC5-201ENST00000377067 KRTAP9-3Q9BYQ3 159 aa6.81□□□□□ -1.32
GPC5-201ENST00000377067 KRTAP2-3P0C7H8 128 aa6.77□□□□□ -1.33
GPC5-201ENST00000377067 KRTAP2-4Q9BYR9 128 aa6.77□□□□□ -1.33
GPC5-201ENST00000377067 KRTAP2-1Q9BYU5 128 aa6.77□□□□□ -1.33
GPC5-201ENST00000377067 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
GPC5-201ENST00000377067 USH2AO75445 5202 aa6.73□□□□□ -1.33
GPC5-201ENST00000377067 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
GPC5-201ENST00000377067 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
GPC5-201ENST00000377067 FSIP2Q5CZC0 6907 aa6.66□□□□□ -1.34
GPC5-201ENST00000377067 LCE2AQ5TA79 106 aaPredicted RBP6.66□□□□□ -1.34
GPC5-201ENST00000377067 LCE2BO14633 110 aa6.52□□□□□ -1.37
GPC5-201ENST00000377067 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
GPC5-201ENST00000377067 MT1LQ93083 61 aa6.35□□□□□ -1.39
GPC5-201ENST00000377067 MT1EP04732 61 aa6.25□□□□□ -1.41
GPC5-201ENST00000377067 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
GPC5-201ENST00000377067 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
GPC5-201ENST00000377067 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms