RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 SEC61GP60059 68 aa6.93□□□□□ -1.3
VRK3-202ENST00000377011 MUC17Q685J3 4493 aa6.93□□□□□ -1.3
VRK3-202ENST00000377011 A8MU10 97 aa6.9□□□□□ -1.3
VRK3-202ENST00000377011 KTN1-AS1Q86SY8 53 aa6.9□□□□□ -1.31
VRK3-202ENST00000377011 DMAC1Q96GE9 116 aa6.9□□□□□ -1.31
VRK3-202ENST00000377011 SPTSSBQ8NFR3 76 aa6.89□□□□□ -1.31
VRK3-202ENST00000377011 IGKV2-30P06310 120 aa6.87□□□□□ -1.31
VRK3-202ENST00000377011 KRTAP16-1A8MUX0 517 aa6.87□□□□□ -1.31
VRK3-202ENST00000377011 A6NN06 94 aa6.86□□□□□ -1.31
VRK3-202ENST00000377011 SPINK1P00995 79 aa6.83□□□□□ -1.32
VRK3-202ENST00000377011 RPS29P62273 56 aaKnown RBP6.83□□□□□ -1.32
VRK3-202ENST00000377011 SPINK7P58062 85 aa6.82□□□□□ -1.32
VRK3-202ENST00000377011 FAT4Q6V0I7 4981 aa6.81□□□□□ -1.32
VRK3-202ENST00000377011 XP32Q5T750 250 aa6.8□□□□□ -1.32
VRK3-202ENST00000377011 TPRXLQ17RH7 258 aa6.78□□□□□ -1.32
VRK3-202ENST00000377011 C7orf65Q6ZTY9 151 aa6.78□□□□□ -1.32
VRK3-202ENST00000377011 A0A1B0GU69 56 aa6.74□□□□□ -1.33
VRK3-202ENST00000377011 IGKV2D-30A0A075B6S6 120 aa6.72□□□□□ -1.33
VRK3-202ENST00000377011 SPATA8Q6RVD6 105 aa6.71□□□□□ -1.34
VRK3-202ENST00000377011 KRTAP4-1Q9BYQ7 146 aa6.7□□□□□ -1.34
VRK3-202ENST00000377011 RBM12B-AS1Q9P1G2 102 aa6.7□□□□□ -1.34
VRK3-202ENST00000377011 UQCR11O14957 56 aa6.67□□□□□ -1.34
VRK3-202ENST00000377011 C9orf92A6NGG3 77 aa6.64□□□□□ -1.35
VRK3-202ENST00000377011 MIR22HGQ0VDD5 57 aa6.63□□□□□ -1.35
VRK3-202ENST00000377011 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
VRK3-202ENST00000377011 A8MUU9 505 aa6.6□□□□□ -1.35
VRK3-202ENST00000377011 KRTAP4-8Q9BYQ9 185 aa6.59□□□□□ -1.35
VRK3-202ENST00000377011 SEC61BP60468 96 aaKnown RBP6.52□□□□□ -1.37
VRK3-202ENST00000377011 KRTAP19-2Q3LHN2 52 aa6.49□□□□□ -1.37
VRK3-202ENST00000377011 RPL37P61927 97 aaKnown RBP6.45□□□□□ -1.38
VRK3-202ENST00000377011 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
VRK3-202ENST00000377011 PRAC1Q96KF2 57 aa6.43□□□□□ -1.38
VRK3-202ENST00000377011 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
VRK3-202ENST00000377011 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
VRK3-202ENST00000377011 KRTAP9-6A0A140TA67 174 aa6.4□□□□□ -1.38
VRK3-202ENST00000377011 ADM2Q7Z4H4 148 aa6.39□□□□□ -1.39
VRK3-202ENST00000377011 FLGP20930 4061 aaPredicted RBP6.39□□□□□ -1.39
VRK3-202ENST00000377011 COX6B2Q6YFQ2 88 aa6.39□□□□□ -1.39
VRK3-202ENST00000377011 LINC01554Q52M75 96 aa6.38□□□□□ -1.39
VRK3-202ENST00000377011 A0A1B0GU33 70 aa6.36□□□□□ -1.39
VRK3-202ENST00000377011 H0YAA0 97 aa6.33□□□□□ -1.4
VRK3-202ENST00000377011 MT1HP80294 61 aa6.33□□□□□ -1.4
VRK3-202ENST00000377011 H1FX-AS1Q4G0G2 97 aa6.33□□□□□ -1.4
VRK3-202ENST00000377011 CSAG1Q6PB30 78 aa6.3□□□□□ -1.4
VRK3-202ENST00000377011 KRTAP4-12Q9BQ66 201 aa6.3□□□□□ -1.4
VRK3-202ENST00000377011 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
VRK3-202ENST00000377011 K7ERS5 55 aa6.26□□□□□ -1.41
VRK3-202ENST00000377011 FSIP2Q5CZC0 6907 aa6.24□□□□□ -1.41
VRK3-202ENST00000377011 KRTAP25-1Q3LHN0 102 aa6.19□□□□□ -1.42
VRK3-202ENST00000377011 KRTAP10-6P60371 365 aaPredicted RBP6.18□□□□□ -1.42
VRK3-202ENST00000377011 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
VRK3-202ENST00000377011 S4R3F8 94 aa6.14□□□□□ -1.43
VRK3-202ENST00000377011 M0R2T5 61 aa6.12□□□□□ -1.43
VRK3-202ENST00000377011 KRTAP9-9Q9BYP9 154 aa6.12□□□□□ -1.43
VRK3-202ENST00000377011 KRTAP9-4Q9BYQ2 154 aa6.12□□□□□ -1.43
VRK3-202ENST00000377011 ROMO1P60602 79 aa6.08□□□□□ -1.44
VRK3-202ENST00000377011 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
VRK3-202ENST00000377011 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
VRK3-202ENST00000377011 USH2AO75445 5202 aa6□□□□□ -1.45
VRK3-202ENST00000377011 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
VRK3-202ENST00000377011 SSPOA2VEC9 5147 aa5.96□□□□□ -1.46
VRK3-202ENST00000377011 MT2AP02795 61 aa5.94□□□□□ -1.46
VRK3-202ENST00000377011 P0C880 135 aa5.94□□□□□ -1.46
VRK3-202ENST00000377011 A0A0D9SG42 100 aa5.93□□□□□ -1.46
VRK3-202ENST00000377011 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
VRK3-202ENST00000377011 MT1FP04733 61 aa5.92□□□□□ -1.46
VRK3-202ENST00000377011 M0QZ58 72 aa5.91□□□□□ -1.46
VRK3-202ENST00000377011 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
VRK3-202ENST00000377011 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
VRK3-202ENST00000377011 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
VRK3-202ENST00000377011 H3BS24 57 aa5.83□□□□□ -1.48
VRK3-202ENST00000377011 KRTAP12-1P59990 96 aa5.82□□□□□ -1.48
VRK3-202ENST00000377011 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
VRK3-202ENST00000377011 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
VRK3-202ENST00000377011 KRTAP10-10P60014 251 aa5.8□□□□□ -1.48
VRK3-202ENST00000377011 SPINT4Q6UDR6 99 aa5.76□□□□□ -1.49
VRK3-202ENST00000377011 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
VRK3-202ENST00000377011 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
VRK3-202ENST00000377011 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
VRK3-202ENST00000377011 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
VRK3-202ENST00000377011 R4GN34 69 aa5.67□□□□□ -1.5
VRK3-202ENST00000377011 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.51
VRK3-202ENST00000377011 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
VRK3-202ENST00000377011 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
VRK3-202ENST00000377011 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
VRK3-202ENST00000377011 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
VRK3-202ENST00000377011 KRTAP19-6Q3LI70 58 aa5.51□□□□□ -1.53
VRK3-202ENST00000377011 KRTAP4-11Q9BYQ6 195 aa5.5□□□□□ -1.53
VRK3-202ENST00000377011 NDUFAF8A1L188 74 aa5.47□□□□□ -1.53
VRK3-202ENST00000377011 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
VRK3-202ENST00000377011 MT1BP07438 61 aa5.45□□□□□ -1.54
VRK3-202ENST00000377011 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
VRK3-202ENST00000377011 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
VRK3-202ENST00000377011 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
VRK3-202ENST00000377011 KRTAP19-8Q3LI54 63 aa5.4□□□□□ -1.55
VRK3-202ENST00000377011 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
VRK3-202ENST00000377011 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
VRK3-202ENST00000377011 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
VRK3-202ENST00000377011 KRTAP10-5P60370 271 aa5.25□□□□□ -1.57
VRK3-202ENST00000377011 TNP1P09430 55 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms