RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 KRTAP3-3Q9BYR6 98 aa8.54□□□□□ -1.04
TRIM39-201ENST00000376656 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.04
TRIM39-201ENST00000376656 DMBT1Q9UGM3 2413 aaPredicted RBP8.5□□□□□ -1.05
TRIM39-201ENST00000376656 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
TRIM39-201ENST00000376656 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
TRIM39-201ENST00000376656 FAT3Q8TDW7 4589 aa8.42□□□□□ -1.06
TRIM39-201ENST00000376656 C10orf95Q9H7T3 257 aa8.42□□□□□ -1.06
TRIM39-201ENST00000376656 HSPG2P98160 4391 aa8.41□□□□□ -1.06
TRIM39-201ENST00000376656 KRTAP10-8P60410 259 aa8.4□□□□□ -1.07
TRIM39-201ENST00000376656 SPINT4Q6UDR6 99 aa8.39□□□□□ -1.07
TRIM39-201ENST00000376656 S4R3F8 94 aa8.37□□□□□ -1.07
TRIM39-201ENST00000376656 NDUFAF8A1L188 74 aa8.35□□□□□ -1.07
TRIM39-201ENST00000376656 LRP1Q07954 4544 aaKnown RBP8.34□□□□□ -1.07
TRIM39-201ENST00000376656 A0A1B0GVY2 172 aa8.33□□□□□ -1.08
TRIM39-201ENST00000376656 KRTAP12-2P59991 146 aa8.31□□□□□ -1.08
TRIM39-201ENST00000376656 TNXBP22105 4242 aa8.3□□□□□ -1.08
TRIM39-201ENST00000376656 MYCBP2O75592 4640 aa8.27□□□□□ -1.09
TRIM39-201ENST00000376656 XP32Q5T750 250 aa8.25□□□□□ -1.09
TRIM39-201ENST00000376656 KRTAP15-1Q3LI76 137 aa8.23□□□□□ -1.09
TRIM39-201ENST00000376656 KRTAP12-1P59990 96 aa8.2□□□□□ -1.1
TRIM39-201ENST00000376656 RYR2Q92736 4967 aa8.09□□□□□ -1.12
TRIM39-201ENST00000376656 LPAP08519 4548 aa8.08□□□□□ -1.12
TRIM39-201ENST00000376656 LUZP6Q538Z0 58 aa8.06□□□□□ -1.12
TRIM39-201ENST00000376656 KMT2CQ8NEZ4 4911 aaKnown RBP8.03□□□□□ -1.12
TRIM39-201ENST00000376656 M0QZ58 72 aa8.01□□□□□ -1.13
TRIM39-201ENST00000376656 Q5VSD8 79 aa8.01□□□□□ -1.13
TRIM39-201ENST00000376656 LRP2P98164 4655 aa7.94□□□□□ -1.14
TRIM39-201ENST00000376656 KRTAP17-1Q9BYP8 105 aa7.9□□□□□ -1.15
TRIM39-201ENST00000376656 MT1HL1P0DM35 61 aa7.86□□□□□ -1.15
TRIM39-201ENST00000376656 RYR1P21817 5038 aa7.84□□□□□ -1.15
TRIM39-201ENST00000376656 R4GN34 69 aa7.8□□□□□ -1.16
TRIM39-201ENST00000376656 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
TRIM39-201ENST00000376656 KIAA1109Q2LD37 5005 aa7.71□□□□□ -1.17
TRIM39-201ENST00000376656 KRTAP21-3Q3LHN1 58 aa7.7□□□□□ -1.18
TRIM39-201ENST00000376656 PLAC4Q8WY50 150 aa7.7□□□□□ -1.18
TRIM39-201ENST00000376656 RYR3Q15413 4870 aa7.69□□□□□ -1.18
TRIM39-201ENST00000376656 SEC61BP60468 96 aaKnown RBP7.63□□□□□ -1.19
TRIM39-201ENST00000376656 ABCA13Q86UQ4 5058 aa7.61□□□□□ -1.19
TRIM39-201ENST00000376656 MUC17Q685J3 4493 aa7.57□□□□□ -1.2
TRIM39-201ENST00000376656 KRTAP4-1Q9BYQ7 146 aa7.47□□□□□ -1.21
TRIM39-201ENST00000376656 CAMK2N1Q7Z7J9 78 aa7.45□□□□□ -1.22
TRIM39-201ENST00000376656 PP632Q6XCG6 107 aa7.44□□□□□ -1.22
TRIM39-201ENST00000376656 J3QL48 77 aa7.4□□□□□ -1.22
TRIM39-201ENST00000376656 EPPK1P58107 5090 aaKnown RBP7.37□□□□□ -1.23
TRIM39-201ENST00000376656 KRTAP19-2Q3LHN2 52 aa7.35□□□□□ -1.23
TRIM39-201ENST00000376656 KRTAP4-5Q9BYR2 181 aa7.35□□□□□ -1.23
TRIM39-201ENST00000376656 TNP1P09430 55 aa7.18□□□□□ -1.26
TRIM39-201ENST00000376656 MUC2Q02817 5179 aa7.17□□□□□ -1.26
TRIM39-201ENST00000376656 FLGP20930 4061 aaPredicted RBP7.14□□□□□ -1.27
TRIM39-201ENST00000376656 SPRR5A0A1B0GTR4 108 aa7.11□□□□□ -1.27
TRIM39-201ENST00000376656 KRTAP23-1A1A580 65 aa7.09□□□□□ -1.28
TRIM39-201ENST00000376656 HERC1Q15751 4861 aa7.06□□□□□ -1.28
TRIM39-201ENST00000376656 PCLOQ9Y6V0 5065 aa7.02□□□□□ -1.29
TRIM39-201ENST00000376656 HERC2O95714 4834 aa6.99□□□□□ -1.29
TRIM39-201ENST00000376656 BIRC6Q9NR09 4857 aa6.94□□□□□ -1.3
TRIM39-201ENST00000376656 SPRR2GQ9BYE4 73 aa6.83□□□□□ -1.32
TRIM39-201ENST00000376656 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
TRIM39-201ENST00000376656 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
TRIM39-201ENST00000376656 FAT4Q6V0I7 4981 aa6.82□□□□□ -1.32
TRIM39-201ENST00000376656 LCE2CQ5TA81 110 aa6.77□□□□□ -1.33
TRIM39-201ENST00000376656 PRO2289Q9P1D8 64 aa6.68□□□□□ -1.34
TRIM39-201ENST00000376656 HMCN2Q8NDA2 5059 aa6.64□□□□□ -1.35
TRIM39-201ENST00000376656 M0R2T5 61 aa6.63□□□□□ -1.35
TRIM39-201ENST00000376656 KRTAP8-1Q8IUC2 63 aa6.6□□□□□ -1.35
TRIM39-201ENST00000376656 MT1FP04733 61 aa6.58□□□□□ -1.36
TRIM39-201ENST00000376656 KRTAP10-10P60014 251 aa6.56□□□□□ -1.36
TRIM39-201ENST00000376656 UBR4Q5T4S7 5183 aa6.55□□□□□ -1.36
TRIM39-201ENST00000376656 MT1HP80294 61 aa6.55□□□□□ -1.36
TRIM39-201ENST00000376656 MT2AP02795 61 aa6.55□□□□□ -1.36
TRIM39-201ENST00000376656 KRTAP10-5P60370 271 aa6.47□□□□□ -1.37
TRIM39-201ENST00000376656 INE1O15225 51 aa6.46□□□□□ -1.38
TRIM39-201ENST00000376656 KRTAP19-8Q3LI54 63 aa6.46□□□□□ -1.38
TRIM39-201ENST00000376656 KRTAP9-8Q9BYQ0 159 aa6.46□□□□□ -1.38
TRIM39-201ENST00000376656 MT1XP80297 61 aa6.45□□□□□ -1.38
TRIM39-201ENST00000376656 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
TRIM39-201ENST00000376656 RNF213Q63HN8 5207 aa6.44□□□□□ -1.38
TRIM39-201ENST00000376656 MT1BP07438 61 aa6.42□□□□□ -1.38
TRIM39-201ENST00000376656 KRTAP10-12P60413 245 aa6.41□□□□□ -1.38
TRIM39-201ENST00000376656 KRTAP10-7P60409 375 aaPredicted RBP6.33□□□□□ -1.4
TRIM39-201ENST00000376656 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
TRIM39-201ENST00000376656 KRTAP19-5Q3LI72 72 aa6.11□□□□□ -1.43
TRIM39-201ENST00000376656 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
TRIM39-201ENST00000376656 KMT2DO14686 5537 aa6.01□□□□□ -1.45
TRIM39-201ENST00000376656 KRTAP9-6A8MVA2 160 aa5.96□□□□□ -1.45
TRIM39-201ENST00000376656 USH2AO75445 5202 aa5.9□□□□□ -1.46
TRIM39-201ENST00000376656 LCE2BO14633 110 aa5.9□□□□□ -1.47
TRIM39-201ENST00000376656 KRTAP4-8A0A0G2JLE6 195 aa5.89□□□□□ -1.47
TRIM39-201ENST00000376656 KRTAP4-8Q9BYQ9 185 aa5.89□□□□□ -1.47
TRIM39-201ENST00000376656 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
TRIM39-201ENST00000376656 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
TRIM39-201ENST00000376656 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
TRIM39-201ENST00000376656 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
TRIM39-201ENST00000376656 KRTAP19-7Q3SYF9 63 aa5.75□□□□□ -1.49
TRIM39-201ENST00000376656 MT1LQ93083 61 aa5.6□□□□□ -1.51
TRIM39-201ENST00000376656 MT1EP04732 61 aa5.54□□□□□ -1.52
TRIM39-201ENST00000376656 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
TRIM39-201ENST00000376656 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
TRIM39-201ENST00000376656 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.55
TRIM39-201ENST00000376656 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
TRIM39-201ENST00000376656 SSPOA2VEC9 5147 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms