RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 CSAG1Q6PB30 78 aa9.83□□□□□ -0.84
MAP1LC3A-202ENST00000374837 H3BPC8 53 aa9.78□□□□□ -0.84
MAP1LC3A-202ENST00000374837 KRTAP19-1Q8IUB9 90 aa9.78□□□□□ -0.84
MAP1LC3A-202ENST00000374837 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
MAP1LC3A-202ENST00000374837 FAM236AA0A1B0GUQ0 79 aa9.71□□□□□ -0.86
MAP1LC3A-202ENST00000374837 FAM236BA0A1B0GV22 79 aa9.71□□□□□ -0.86
MAP1LC3A-202ENST00000374837 A8MUN3 132 aa9.71□□□□□ -0.86
MAP1LC3A-202ENST00000374837 SYNE2Q8WXH0 6885 aaKnown RBP9.69□□□□□ -0.86
MAP1LC3A-202ENST00000374837 TRAV7A0A075B6U4 112 aa9.66□□□□□ -0.86
MAP1LC3A-202ENST00000374837 SMIM20Q8N5G0 67 aa9.66□□□□□ -0.86
MAP1LC3A-202ENST00000374837 MACF1Q9UPN3 7388 aaKnown RBP9.64□□□□□ -0.87
MAP1LC3A-202ENST00000374837 NDUFC1O43677 76 aa9.62□□□□□ -0.87
MAP1LC3A-202ENST00000374837 DMAC1Q96GE9 116 aa9.54□□□□□ -0.88
MAP1LC3A-202ENST00000374837 H0YAA0 97 aa9.46□□□□□ -0.9
MAP1LC3A-202ENST00000374837 SPRR2GQ9BYE4 73 aa9.45□□□□□ -0.9
MAP1LC3A-202ENST00000374837 SNURFQ9Y675 71 aa9.45□□□□□ -0.9
MAP1LC3A-202ENST00000374837 SERP2Q8N6R1 65 aa9.44□□□□□ -0.9
MAP1LC3A-202ENST00000374837 KRTAP19-6Q3LI70 58 aa9.43□□□□□ -0.9
MAP1LC3A-202ENST00000374837 KRTAP6-3Q3LI67 103 aa9.4□□□□□ -0.9
MAP1LC3A-202ENST00000374837 CRIPTQ9P021 101 aa9.39□□□□□ -0.91
MAP1LC3A-202ENST00000374837 ADM2Q7Z4H4 148 aa9.38□□□□□ -0.91
MAP1LC3A-202ENST00000374837 C20orf197Q8N268 126 aa9.38□□□□□ -0.91
MAP1LC3A-202ENST00000374837 ACYP2P14621 99 aa9.37□□□□□ -0.91
MAP1LC3A-202ENST00000374837 KRTAP19-8Q3LI54 63 aa9.35□□□□□ -0.91
MAP1LC3A-202ENST00000374837 MT1BP07438 61 aa9.33□□□□□ -0.92
MAP1LC3A-202ENST00000374837 Q5VV11 94 aa9.31□□□□□ -0.92
MAP1LC3A-202ENST00000374837 SPANXA2-OT1Q8N9U9 137 aa9.27□□□□□ -0.93
MAP1LC3A-202ENST00000374837 P0C880 135 aa9.22□□□□□ -0.93
MAP1LC3A-202ENST00000374837 COX7CP15954 63 aa9.22□□□□□ -0.93
MAP1LC3A-202ENST00000374837 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
MAP1LC3A-202ENST00000374837 CHKB-CPT1BH3BT56 60 aa9.19□□□□□ -0.94
MAP1LC3A-202ENST00000374837 SPTSSBQ8NFR3 76 aa9.18□□□□□ -0.94
MAP1LC3A-202ENST00000374837 NEBP20929 6669 aa9.11□□□□□ -0.95
MAP1LC3A-202ENST00000374837 R4GN34 69 aa9.1□□□□□ -0.95
MAP1LC3A-202ENST00000374837 A6NN06 94 aa9.09□□□□□ -0.95
MAP1LC3A-202ENST00000374837 KRTAP20-1Q3LI63 56 aa9.06□□□□□ -0.96
MAP1LC3A-202ENST00000374837 CYSTM1Q9H1C7 97 aa9.06□□□□□ -0.96
MAP1LC3A-202ENST00000374837 M0QZ58 72 aa9.05□□□□□ -0.96
MAP1LC3A-202ENST00000374837 KRTAP10-5P60370 271 aa9.05□□□□□ -0.96
MAP1LC3A-202ENST00000374837 H7BZZ5 65 aa9.03□□□□□ -0.96
MAP1LC3A-202ENST00000374837 ANAPC13Q9BS18 74 aa9.03□□□□□ -0.96
MAP1LC3A-202ENST00000374837 COA5Q86WW8 74 aa9□□□□□ -0.97
MAP1LC3A-202ENST00000374837 MUC12Q9UKN1 5478 aa8.95□□□□□ -0.98
MAP1LC3A-202ENST00000374837 PLAC4Q8WY50 150 aa8.93□□□□□ -0.98
MAP1LC3A-202ENST00000374837 LINC01554Q52M75 96 aa8.91□□□□□ -0.98
MAP1LC3A-202ENST00000374837 CCDC179H3BU77 68 aa8.88□□□□□ -0.99
MAP1LC3A-202ENST00000374837 MT1XP80297 61 aa8.81□□□□□ -1
MAP1LC3A-202ENST00000374837 PRO2289Q9P1D8 64 aa8.78□□□□□ -1
MAP1LC3A-202ENST00000374837 KRTAP13-4Q3LI77 160 aa8.73□□□□□ -1.01
MAP1LC3A-202ENST00000374837 SEC61GP60059 68 aa8.72□□□□□ -1.01
MAP1LC3A-202ENST00000374837 SERP1Q9Y6X1 66 aa8.71□□□□□ -1.02
MAP1LC3A-202ENST00000374837 KRTAP5-9P26371 169 aa8.66□□□□□ -1.02
MAP1LC3A-202ENST00000374837 KRTAP2-3P0C7H8 128 aa8.64□□□□□ -1.03
MAP1LC3A-202ENST00000374837 KRTAP2-4Q9BYR9 128 aa8.64□□□□□ -1.03
MAP1LC3A-202ENST00000374837 MDN1Q9NU22 5596 aa8.64□□□□□ -1.03
MAP1LC3A-202ENST00000374837 ATP5EP56381 51 aaPredicted RBP8.63□□□□□ -1.03
MAP1LC3A-202ENST00000374837 KMT2DO14686 5537 aa8.62□□□□□ -1.03
MAP1LC3A-202ENST00000374837 A0A1B0GU33 70 aa8.56□□□□□ -1.04
MAP1LC3A-202ENST00000374837 SPATA8Q6RVD6 105 aa8.53□□□□□ -1.04
MAP1LC3A-202ENST00000374837 A0A1B0GU69 56 aa8.52□□□□□ -1.05
MAP1LC3A-202ENST00000374837 KRTAP12-2P59991 146 aa8.52□□□□□ -1.05
MAP1LC3A-202ENST00000374837 TMEM258P61165 79 aa8.51□□□□□ -1.05
MAP1LC3A-202ENST00000374837 A0A0D9SG42 100 aa8.49□□□□□ -1.05
MAP1LC3A-202ENST00000374837 KRTAP10-7P60409 375 aaPredicted RBP8.42□□□□□ -1.06
MAP1LC3A-202ENST00000374837 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
MAP1LC3A-202ENST00000374837 KRTAP10-12P60413 245 aa8.37□□□□□ -1.07
MAP1LC3A-202ENST00000374837 KRTAP4-8A0A0G2JLE6 195 aa8.36□□□□□ -1.07
MAP1LC3A-202ENST00000374837 KRTAP8-1Q8IUC2 63 aa8.36□□□□□ -1.07
MAP1LC3A-202ENST00000374837 KRTAP4-8Q9BYQ9 185 aa8.36□□□□□ -1.07
MAP1LC3A-202ENST00000374837 LINC01558Q9Y6Z2 57 aa8.36□□□□□ -1.07
MAP1LC3A-202ENST00000374837 SPRR2EP22531 72 aa8.34□□□□□ -1.07
MAP1LC3A-202ENST00000374837 SPRR2BP35325 72 aa8.34□□□□□ -1.07
MAP1LC3A-202ENST00000374837 SPRR2AP35326 72 aa8.34□□□□□ -1.07
MAP1LC3A-202ENST00000374837 SPINT4Q6UDR6 99 aa8.34□□□□□ -1.07
MAP1LC3A-202ENST00000374837 PRR15LQ9BU68 103 aa8.33□□□□□ -1.08
MAP1LC3A-202ENST00000374837 KRTAP12-1P59990 96 aa8.32□□□□□ -1.08
MAP1LC3A-202ENST00000374837 KRTAP2-2Q9BYT5 123 aa8.32□□□□□ -1.08
MAP1LC3A-202ENST00000374837 KRTAP2-1Q9BYU5 128 aa8.32□□□□□ -1.08
MAP1LC3A-202ENST00000374837 SMIM26A0A096LP01 95 aa8.31□□□□□ -1.08
MAP1LC3A-202ENST00000374837 SPRR2FQ96RM1 72 aa8.3□□□□□ -1.08
MAP1LC3A-202ENST00000374837 A8MU10 97 aa8.27□□□□□ -1.09
MAP1LC3A-202ENST00000374837 LCE1AQ5T7P2 110 aa8.1□□□□□ -1.11
MAP1LC3A-202ENST00000374837 UQCR11O14957 56 aa8.08□□□□□ -1.12
MAP1LC3A-202ENST00000374837 SPRR2DP22532 72 aa8.07□□□□□ -1.12
MAP1LC3A-202ENST00000374837 V9GYY9 64 aa8.01□□□□□ -1.13
MAP1LC3A-202ENST00000374837 PCP4P48539 62 aa7.99□□□□□ -1.13
MAP1LC3A-202ENST00000374837 Q1T7F1 81 aa7.98□□□□□ -1.13
MAP1LC3A-202ENST00000374837 PSPHP1O15172 72 aa7.95□□□□□ -1.14
MAP1LC3A-202ENST00000374837 C10orf95Q9H7T3 257 aa7.95□□□□□ -1.14
MAP1LC3A-202ENST00000374837 MIR22HGQ0VDD5 57 aa7.93□□□□□ -1.14
MAP1LC3A-202ENST00000374837 LCE3BQ5TA77 95 aa7.9□□□□□ -1.14
MAP1LC3A-202ENST00000374837 KRTAP19-7Q3SYF9 63 aa7.87□□□□□ -1.15
MAP1LC3A-202ENST00000374837 GPR98Q8WXG9 6306 aa7.87□□□□□ -1.15
MAP1LC3A-202ENST00000374837 TNP1P09430 55 aa7.84□□□□□ -1.15
MAP1LC3A-202ENST00000374837 RPS28P62857 69 aaKnown RBP7.82□□□□□ -1.16
MAP1LC3A-202ENST00000374837 MT1EP04732 61 aa7.79□□□□□ -1.16
MAP1LC3A-202ENST00000374837 KRTAP19-5Q3LI72 72 aa7.76□□□□□ -1.17
MAP1LC3A-202ENST00000374837 LCE3AQ5TA76 89 aa7.72□□□□□ -1.17
MAP1LC3A-202ENST00000374837 K7ERS5 55 aa7.7□□□□□ -1.18
MAP1LC3A-202ENST00000374837 A6NED7 52 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms