RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 C9orf92A6NGG3 77 aa7.26□□□□□ -1.25
A1CF-204ENST00000373997 MIR22HGQ0VDD5 57 aa7.25□□□□□ -1.25
A1CF-204ENST00000373997 BIRC6Q9NR09 4857 aa7.18□□□□□ -1.26
A1CF-204ENST00000373997 LINC01554Q52M75 96 aa7.16□□□□□ -1.26
A1CF-204ENST00000373997 A8MUU9 505 aa7.12□□□□□ -1.27
A1CF-204ENST00000373997 C20orf166-AS1Q96NR2 134 aa7.12□□□□□ -1.27
A1CF-204ENST00000373997 ABCA13Q86UQ4 5058 aa7.11□□□□□ -1.27
A1CF-204ENST00000373997 HERC2O95714 4834 aa7.1□□□□□ -1.27
A1CF-204ENST00000373997 PRAC1Q96KF2 57 aa7.09□□□□□ -1.27
A1CF-204ENST00000373997 ADM2Q7Z4H4 148 aa7.06□□□□□ -1.28
A1CF-204ENST00000373997 XP32Q5T750 250 aa7.03□□□□□ -1.28
A1CF-204ENST00000373997 KRTAP3-1Q9BYR8 98 aa7□□□□□ -1.29
A1CF-204ENST00000373997 RPL37P61927 97 aaKnown RBP6.98□□□□□ -1.29
A1CF-204ENST00000373997 LCE2DQ5TA82 110 aaPredicted RBP6.97□□□□□ -1.29
A1CF-204ENST00000373997 H0YAA0 97 aa6.97□□□□□ -1.29
A1CF-204ENST00000373997 A0A1B0GU33 70 aa6.96□□□□□ -1.3
A1CF-204ENST00000373997 TPRXLQ17RH7 258 aa6.96□□□□□ -1.3
A1CF-204ENST00000373997 H1FX-AS1Q4G0G2 97 aa6.94□□□□□ -1.3
A1CF-204ENST00000373997 COX6B2Q6YFQ2 88 aa6.93□□□□□ -1.3
A1CF-204ENST00000373997 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
A1CF-204ENST00000373997 LPAP08519 4548 aa6.9□□□□□ -1.3
A1CF-204ENST00000373997 LRP2P98164 4655 aa6.84□□□□□ -1.31
A1CF-204ENST00000373997 PCLOQ9Y6V0 5065 aa6.82□□□□□ -1.32
A1CF-204ENST00000373997 K7ERS5 55 aa6.8□□□□□ -1.32
A1CF-204ENST00000373997 KRTAP25-1Q3LHN0 102 aa6.76□□□□□ -1.33
A1CF-204ENST00000373997 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.34
A1CF-204ENST00000373997 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
A1CF-204ENST00000373997 HERC1Q15751 4861 aa6.7□□□□□ -1.34
A1CF-204ENST00000373997 S4R3F8 94 aa6.66□□□□□ -1.34
A1CF-204ENST00000373997 KRTAP3-2Q9BYR7 98 aa6.64□□□□□ -1.35
A1CF-204ENST00000373997 ROMO1P60602 79 aa6.64□□□□□ -1.35
A1CF-204ENST00000373997 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
A1CF-204ENST00000373997 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
A1CF-204ENST00000373997 LUZP6Q538Z0 58 aa6.6□□□□□ -1.35
A1CF-204ENST00000373997 HMCN2Q8NDA2 5059 aa6.59□□□□□ -1.35
A1CF-204ENST00000373997 MUC17Q685J3 4493 aa6.58□□□□□ -1.36
A1CF-204ENST00000373997 A0A0D9SG42 100 aa6.54□□□□□ -1.36
A1CF-204ENST00000373997 P0C880 135 aa6.52□□□□□ -1.37
A1CF-204ENST00000373997 CRIPTQ9P021 101 aa6.52□□□□□ -1.37
A1CF-204ENST00000373997 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
A1CF-204ENST00000373997 M0QZ58 72 aa6.41□□□□□ -1.38
A1CF-204ENST00000373997 KRTAP12-2P59991 146 aa6.41□□□□□ -1.38
A1CF-204ENST00000373997 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
A1CF-204ENST00000373997 MUC2Q02817 5179 aa6.39□□□□□ -1.39
A1CF-204ENST00000373997 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
A1CF-204ENST00000373997 CAMK2N1Q7Z7J9 78 aa6.38□□□□□ -1.39
A1CF-204ENST00000373997 SPINT4Q6UDR6 99 aa6.34□□□□□ -1.4
A1CF-204ENST00000373997 C10orf95Q9H7T3 257 aa6.31□□□□□ -1.4
A1CF-204ENST00000373997 UBR4Q5T4S7 5183 aa6.29□□□□□ -1.4
A1CF-204ENST00000373997 FLGP20930 4061 aaPredicted RBP6.27□□□□□ -1.41
A1CF-204ENST00000373997 RNF213Q63HN8 5207 aa6.27□□□□□ -1.41
A1CF-204ENST00000373997 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
A1CF-204ENST00000373997 NDUFAF8A1L188 74 aa6.18□□□□□ -1.42
A1CF-204ENST00000373997 R4GN34 69 aa6.18□□□□□ -1.42
A1CF-204ENST00000373997 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
A1CF-204ENST00000373997 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
A1CF-204ENST00000373997 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
A1CF-204ENST00000373997 MT1HP80294 61 aa6.13□□□□□ -1.43
A1CF-204ENST00000373997 FAT4Q6V0I7 4981 aa6.12□□□□□ -1.43
A1CF-204ENST00000373997 M0R2T5 61 aa6.12□□□□□ -1.43
A1CF-204ENST00000373997 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
A1CF-204ENST00000373997 MT2AP02795 61 aa5.91□□□□□ -1.46
A1CF-204ENST00000373997 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
A1CF-204ENST00000373997 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
A1CF-204ENST00000373997 MT1FP04733 61 aa5.89□□□□□ -1.47
A1CF-204ENST00000373997 KRTAP10-10P60014 251 aa5.88□□□□□ -1.47
A1CF-204ENST00000373997 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
A1CF-204ENST00000373997 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
A1CF-204ENST00000373997 KRTAP19-1Q8IUB9 90 aa5.78□□□□□ -1.48
A1CF-204ENST00000373997 SPRR2GQ9BYE4 73 aa5.78□□□□□ -1.48
A1CF-204ENST00000373997 TNP1P09430 55 aa5.7□□□□□ -1.5
A1CF-204ENST00000373997 KRTAP9-3Q9BYQ3 159 aa5.68□□□□□ -1.5
A1CF-204ENST00000373997 PRO2289Q9P1D8 64 aa5.63□□□□□ -1.51
A1CF-204ENST00000373997 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
A1CF-204ENST00000373997 MT1BP07438 61 aa5.57□□□□□ -1.52
A1CF-204ENST00000373997 LCE2BO14633 110 aa5.53□□□□□ -1.52
A1CF-204ENST00000373997 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
A1CF-204ENST00000373997 MT1XP80297 61 aa5.41□□□□□ -1.54
A1CF-204ENST00000373997 KRTAP10-5P60370 271 aa5.39□□□□□ -1.55
A1CF-204ENST00000373997 KRTAP4-8Q9BYQ9 185 aa5.38□□□□□ -1.55
A1CF-204ENST00000373997 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
A1CF-204ENST00000373997 USH2AO75445 5202 aa5.33□□□□□ -1.56
A1CF-204ENST00000373997 KRTAP8-1Q8IUC2 63 aa5.26□□□□□ -1.57
A1CF-204ENST00000373997 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.24□□□□□ -1.57
A1CF-204ENST00000373997 KRTAP9-2Q9BYQ4 174 aa5.23□□□□□ -1.57
A1CF-204ENST00000373997 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
A1CF-204ENST00000373997 KRTAP9-6A0A140TA67 174 aa5.21□□□□□ -1.58
A1CF-204ENST00000373997 INE1O15225 51 aa5.21□□□□□ -1.58
A1CF-204ENST00000373997 SSPOA2VEC9 5147 aa5.19□□□□□ -1.58
A1CF-204ENST00000373997 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
A1CF-204ENST00000373997 KRTAP19-6Q3LI70 58 aa5.14□□□□□ -1.59
A1CF-204ENST00000373997 FSIP2Q5CZC0 6907 aa5.11□□□□□ -1.59
A1CF-204ENST00000373997 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
A1CF-204ENST00000373997 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
A1CF-204ENST00000373997 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
A1CF-204ENST00000373997 KMT2DO14686 5537 aa4.98□□□□□ -1.61
A1CF-204ENST00000373997 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
A1CF-204ENST00000373997 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
A1CF-204ENST00000373997 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
A1CF-204ENST00000373997 FCGBPQ9Y6R7 5405 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms