RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 BIRC6Q9NR09 4857 aa12.07□□□□□ -0.48
SNX21-204ENST00000372542 SPATA8Q6RVD6 105 aa12.05□□□□□ -0.48
SNX21-204ENST00000372542 ABCA13Q86UQ4 5058 aa12.05□□□□□ -0.48
SNX21-204ENST00000372542 HERC2O95714 4834 aa12.03□□□□□ -0.48
SNX21-204ENST00000372542 MIR22HGQ0VDD5 57 aa12.01□□□□□ -0.49
SNX21-204ENST00000372542 S4R3F8 94 aa12.01□□□□□ -0.49
SNX21-204ENST00000372542 SEC61BP60468 96 aaKnown RBP11.99□□□□□ -0.49
SNX21-204ENST00000372542 H1FX-AS1Q4G0G2 97 aa11.99□□□□□ -0.49
SNX21-204ENST00000372542 RBM12B-AS1Q9P1G2 102 aa11.98□□□□□ -0.49
SNX21-204ENST00000372542 LRP2P98164 4655 aa11.98□□□□□ -0.49
SNX21-204ENST00000372542 KRTAP3-3Q9BYR6 98 aa11.97□□□□□ -0.49
SNX21-204ENST00000372542 PMAIP1Q13794 54 aa11.96□□□□□ -0.49
SNX21-204ENST00000372542 LPAP08519 4548 aa11.91□□□□□ -0.5
SNX21-204ENST00000372542 A0A1B0GU33 70 aa11.87□□□□□ -0.51
SNX21-204ENST00000372542 A6NN06 94 aa11.82□□□□□ -0.52
SNX21-204ENST00000372542 H0YAA0 97 aa11.74□□□□□ -0.53
SNX21-204ENST00000372542 KRTAP10-6P60371 365 aaPredicted RBP11.7□□□□□ -0.54
SNX21-204ENST00000372542 CSAG1Q6PB30 78 aa11.69□□□□□ -0.54
SNX21-204ENST00000372542 KRTAP3-2Q9BYR7 98 aa11.67□□□□□ -0.54
SNX21-204ENST00000372542 KRTAP4-1Q9BYQ7 146 aa11.63□□□□□ -0.55
SNX21-204ENST00000372542 KTN1-AS1Q86SY8 53 aa11.62□□□□□ -0.55
SNX21-204ENST00000372542 MUC17Q685J3 4493 aa11.61□□□□□ -0.55
SNX21-204ENST00000372542 ADM2Q7Z4H4 148 aa11.53□□□□□ -0.56
SNX21-204ENST00000372542 P0C880 135 aa11.51□□□□□ -0.57
SNX21-204ENST00000372542 KRTAP13-4Q3LI77 160 aa11.43□□□□□ -0.58
SNX21-204ENST00000372542 K7ERS5 55 aa11.42□□□□□ -0.58
SNX21-204ENST00000372542 KRTAP19-2Q3LHN2 52 aa11.42□□□□□ -0.58
SNX21-204ENST00000372542 PCLOQ9Y6V0 5065 aa11.4□□□□□ -0.58
SNX21-204ENST00000372542 M0QZ58 72 aa11.32□□□□□ -0.6
SNX21-204ENST00000372542 HMCN2Q8NDA2 5059 aa11.31□□□□□ -0.6
SNX21-204ENST00000372542 HERC1Q15751 4861 aa11.3□□□□□ -0.6
SNX21-204ENST00000372542 A0A0D9SG42 100 aa11.28□□□□□ -0.6
SNX21-204ENST00000372542 PRAC1Q96KF2 57 aa11.12□□□□□ -0.63
SNX21-204ENST00000372542 R4GN34 69 aa11.09□□□□□ -0.63
SNX21-204ENST00000372542 KRTAP12-1P59990 96 aa11.05□□□□□ -0.64
SNX21-204ENST00000372542 FLGP20930 4061 aaPredicted RBP11.04□□□□□ -0.64
SNX21-204ENST00000372542 KRTAP12-2P59991 146 aa11.03□□□□□ -0.64
SNX21-204ENST00000372542 ROMO1P60602 79 aa11□□□□□ -0.65
SNX21-204ENST00000372542 SPINT4Q6UDR6 99 aa10.99□□□□□ -0.65
SNX21-204ENST00000372542 MUC2Q02817 5179 aa10.96□□□□□ -0.65
SNX21-204ENST00000372542 LORP23490 312 aaPredicted RBP10.95□□□□□ -0.66
SNX21-204ENST00000372542 LCE2CQ5TA81 110 aa10.95□□□□□ -0.66
SNX21-204ENST00000372542 LINC01554Q52M75 96 aa10.89□□□□□ -0.67
SNX21-204ENST00000372542 CRIPTQ9P021 101 aa10.84□□□□□ -0.67
SNX21-204ENST00000372542 KRTAP25-1Q3LHN0 102 aa10.79□□□□□ -0.68
SNX21-204ENST00000372542 RNF213Q63HN8 5207 aa10.73□□□□□ -0.69
SNX21-204ENST00000372542 MT1HP80294 61 aa10.71□□□□□ -0.69
SNX21-204ENST00000372542 M0R2T5 61 aa10.68□□□□□ -0.7
SNX21-204ENST00000372542 UBR4Q5T4S7 5183 aa10.64□□□□□ -0.71
SNX21-204ENST00000372542 FAT4Q6V0I7 4981 aa10.54□□□□□ -0.72
SNX21-204ENST00000372542 CAMK2N1Q7Z7J9 78 aa10.46□□□□□ -0.74
SNX21-204ENST00000372542 SPRR2GQ9BYE4 73 aa10.46□□□□□ -0.74
SNX21-204ENST00000372542 C10orf95Q9H7T3 257 aa10.42□□□□□ -0.74
SNX21-204ENST00000372542 MT2AP02795 61 aa10.4□□□□□ -0.74
SNX21-204ENST00000372542 KRTAP9-8Q9BYQ0 159 aa10.38□□□□□ -0.75
SNX21-204ENST00000372542 KRTAP19-1Q8IUB9 90 aa10.36□□□□□ -0.75
SNX21-204ENST00000372542 KRTAP10-10P60014 251 aa10.35□□□□□ -0.75
SNX21-204ENST00000372542 MT1FP04733 61 aa10.35□□□□□ -0.75
SNX21-204ENST00000372542 PLAC4Q8WY50 150 aa10.25□□□□□ -0.77
SNX21-204ENST00000372542 KRTAP19-8Q3LI54 63 aa10.11□□□□□ -0.79
SNX21-204ENST00000372542 PP632Q6XCG6 107 aa10.05□□□□□ -0.8
SNX21-204ENST00000372542 TNP1P09430 55 aa10.04□□□□□ -0.8
SNX21-204ENST00000372542 KRTAP9-3Q9BYQ3 159 aa9.99□□□□□ -0.81
SNX21-204ENST00000372542 LCE2AQ5TA79 106 aaPredicted RBP9.93□□□□□ -0.82
SNX21-204ENST00000372542 KRTAP23-1A1A580 65 aa9.91□□□□□ -0.82
SNX21-204ENST00000372542 MT1BP07438 61 aa9.91□□□□□ -0.82
SNX21-204ENST00000372542 KRTAP10-5P60370 271 aa9.7□□□□□ -0.86
SNX21-204ENST00000372542 MT1XP80297 61 aa9.7□□□□□ -0.86
SNX21-204ENST00000372542 KRTAP15-1Q3LI76 137 aa9.66□□□□□ -0.86
SNX21-204ENST00000372542 LCE2BO14633 110 aa9.61□□□□□ -0.87
SNX21-204ENST00000372542 PRO2289Q9P1D8 64 aa9.59□□□□□ -0.88
SNX21-204ENST00000372542 LCE3AQ5TA76 89 aa9.49□□□□□ -0.89
SNX21-204ENST00000372542 KRTAP10-12P60413 245 aa9.38□□□□□ -0.91
SNX21-204ENST00000372542 KRTAP8-1Q8IUC2 63 aa9.35□□□□□ -0.91
SNX21-204ENST00000372542 KRTAP10-7P60409 375 aaPredicted RBP9.33□□□□□ -0.92
SNX21-204ENST00000372542 USH2AO75445 5202 aa9.16□□□□□ -0.94
SNX21-204ENST00000372542 NDUFAF8A1L188 74 aa9.12□□□□□ -0.95
SNX21-204ENST00000372542 KRTAP12-3P60328 96 aa9.11□□□□□ -0.95
SNX21-204ENST00000372542 SPRR5A0A1B0GTR4 108 aa9.07□□□□□ -0.96
SNX21-204ENST00000372542 LUZP6Q538Z0 58 aa9.03□□□□□ -0.96
SNX21-204ENST00000372542 KRTAP19-6Q3LI70 58 aa8.94□□□□□ -0.98
SNX21-204ENST00000372542 KRTAP19-5Q3LI72 72 aa8.88□□□□□ -0.99
SNX21-204ENST00000372542 SSPOA2VEC9 5147 aa8.87□□□□□ -0.99
SNX21-204ENST00000372542 LCE2DQ5TA82 110 aaPredicted RBP8.87□□□□□ -0.99
SNX21-204ENST00000372542 KRTAP4-8A0A0G2JLE6 195 aa8.82□□□□□ -1
SNX21-204ENST00000372542 KRTAP4-8Q9BYQ9 185 aa8.82□□□□□ -1
SNX21-204ENST00000372542 H3BS24 57 aa8.79□□□□□ -1
SNX21-204ENST00000372542 KRTAP19-7Q3SYF9 63 aa8.65□□□□□ -1.02
SNX21-204ENST00000372542 KMT2DO14686 5537 aa8.62□□□□□ -1.03
SNX21-204ENST00000372542 LCE3CQ5T5A8 94 aa8.55□□□□□ -1.04
SNX21-204ENST00000372542 KRTAP19-4Q3LI73 84 aa8.53□□□□□ -1.04
SNX21-204ENST00000372542 MT1EP04732 61 aa8.47□□□□□ -1.05
SNX21-204ENST00000372542 MT1LQ93083 61 aa8.38□□□□□ -1.07
SNX21-204ENST00000372542 FSIP2Q5CZC0 6907 aa8.38□□□□□ -1.07
SNX21-204ENST00000372542 FCGBPQ9Y6R7 5405 aaPredicted RBP8.32□□□□□ -1.08
SNX21-204ENST00000372542 KRTAP9-2Q9BYQ4 174 aa8.21□□□□□ -1.1
SNX21-204ENST00000372542 A0A0A0MQY5 61 aa8.16□□□□□ -1.1
SNX21-204ENST00000372542 KRTAP4-7Q9BYR0 210 aa8.15□□□□□ -1.11
SNX21-204ENST00000372542 KRTAP9-6A8MVA2 160 aa8.08□□□□□ -1.12
SNX21-204ENST00000372542 KRTAP19-3Q7Z4W3 81 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms