RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 KRTAP10-8P60410 259 aa8.7□□□□□ -1.02
PCIF1-201ENST00000372409 TNXBP22105 4242 aa8.68□□□□□ -1.02
PCIF1-201ENST00000372409 LINC01554Q52M75 96 aa8.68□□□□□ -1.02
PCIF1-201ENST00000372409 KIAA1109Q2LD37 5005 aa8.68□□□□□ -1.02
PCIF1-201ENST00000372409 KRTAP17-1Q9BYP8 105 aa8.67□□□□□ -1.02
PCIF1-201ENST00000372409 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.02
PCIF1-201ENST00000372409 XP32Q5T750 250 aa8.62□□□□□ -1.03
PCIF1-201ENST00000372409 K7ERS5 55 aa8.57□□□□□ -1.04
PCIF1-201ENST00000372409 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
PCIF1-201ENST00000372409 LPAP08519 4548 aa8.56□□□□□ -1.04
PCIF1-201ENST00000372409 S4R3F8 94 aa8.54□□□□□ -1.04
PCIF1-201ENST00000372409 RYR1P21817 5038 aa8.53□□□□□ -1.04
PCIF1-201ENST00000372409 EPPK1P58107 5090 aaKnown RBP8.53□□□□□ -1.04
PCIF1-201ENST00000372409 KRTAP10-6P60371 365 aaPredicted RBP8.51□□□□□ -1.05
PCIF1-201ENST00000372409 A0A0D9SG42 100 aa8.48□□□□□ -1.05
PCIF1-201ENST00000372409 KRTAP25-1Q3LHN0 102 aa8.46□□□□□ -1.06
PCIF1-201ENST00000372409 KRTAP13-4Q3LI77 160 aa8.46□□□□□ -1.06
PCIF1-201ENST00000372409 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
PCIF1-201ENST00000372409 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
PCIF1-201ENST00000372409 ABCA13Q86UQ4 5058 aa8.43□□□□□ -1.06
PCIF1-201ENST00000372409 MT1HL1P0DM35 61 aa8.42□□□□□ -1.06
PCIF1-201ENST00000372409 LRP2P98164 4655 aa8.41□□□□□ -1.06
PCIF1-201ENST00000372409 P0C880 135 aa8.39□□□□□ -1.07
PCIF1-201ENST00000372409 ROMO1P60602 79 aa8.35□□□□□ -1.07
PCIF1-201ENST00000372409 TPRXLQ17RH7 258 aa8.25□□□□□ -1.09
PCIF1-201ENST00000372409 KRTAP4-5Q9BYR2 181 aa8.24□□□□□ -1.09
PCIF1-201ENST00000372409 KRTAP12-2P59991 146 aa8.2□□□□□ -1.1
PCIF1-201ENST00000372409 SPINT4Q6UDR6 99 aa8.19□□□□□ -1.1
PCIF1-201ENST00000372409 H3BS24 57 aa8.14□□□□□ -1.11
PCIF1-201ENST00000372409 KRTAP12-1P59990 96 aa8.12□□□□□ -1.11
PCIF1-201ENST00000372409 C10orf95Q9H7T3 257 aa8.12□□□□□ -1.11
PCIF1-201ENST00000372409 MUC2Q02817 5179 aa8.09□□□□□ -1.11
PCIF1-201ENST00000372409 M0QZ58 72 aa8.07□□□□□ -1.12
PCIF1-201ENST00000372409 SEC61BP60468 96 aaKnown RBP7.97□□□□□ -1.13
PCIF1-201ENST00000372409 HERC2O95714 4834 aa7.96□□□□□ -1.14
PCIF1-201ENST00000372409 R4GN34 69 aa7.95□□□□□ -1.14
PCIF1-201ENST00000372409 J3QL48 77 aa7.89□□□□□ -1.15
PCIF1-201ENST00000372409 MUC17Q685J3 4493 aa7.88□□□□□ -1.15
PCIF1-201ENST00000372409 KRTAP4-1Q9BYQ7 146 aa7.87□□□□□ -1.15
PCIF1-201ENST00000372409 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
PCIF1-201ENST00000372409 HERC1Q15751 4861 aa7.8□□□□□ -1.16
PCIF1-201ENST00000372409 PCLOQ9Y6V0 5065 aa7.72□□□□□ -1.17
PCIF1-201ENST00000372409 KRTAP15-1Q3LI76 137 aa7.69□□□□□ -1.18
PCIF1-201ENST00000372409 KRTAP19-2Q3LHN2 52 aa7.66□□□□□ -1.18
PCIF1-201ENST00000372409 FAT4Q6V0I7 4981 aa7.63□□□□□ -1.19
PCIF1-201ENST00000372409 NDUFAF8A1L188 74 aa7.58□□□□□ -1.2
PCIF1-201ENST00000372409 CAMK2N1Q7Z7J9 78 aa7.58□□□□□ -1.2
PCIF1-201ENST00000372409 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
PCIF1-201ENST00000372409 BIRC6Q9NR09 4857 aa7.56□□□□□ -1.2
PCIF1-201ENST00000372409 FLGP20930 4061 aaPredicted RBP7.45□□□□□ -1.22
PCIF1-201ENST00000372409 HMCN2Q8NDA2 5059 aa7.45□□□□□ -1.22
PCIF1-201ENST00000372409 UBR4Q5T4S7 5183 aa7.42□□□□□ -1.22
PCIF1-201ENST00000372409 PLAC4Q8WY50 150 aa7.41□□□□□ -1.22
PCIF1-201ENST00000372409 PP632Q6XCG6 107 aa7.35□□□□□ -1.23
PCIF1-201ENST00000372409 TNP1P09430 55 aa7.25□□□□□ -1.25
PCIF1-201ENST00000372409 LCE2CQ5TA81 110 aa7.22□□□□□ -1.25
PCIF1-201ENST00000372409 M0R2T5 61 aa7.2□□□□□ -1.26
PCIF1-201ENST00000372409 LUZP6Q538Z0 58 aa7.1□□□□□ -1.27
PCIF1-201ENST00000372409 SPRR2GQ9BYE4 73 aa7.1□□□□□ -1.27
PCIF1-201ENST00000372409 KRTAP19-1Q8IUB9 90 aa7.08□□□□□ -1.28
PCIF1-201ENST00000372409 MT1HP80294 61 aa7.05□□□□□ -1.28
PCIF1-201ENST00000372409 KRTAP23-1A1A580 65 aa7.03□□□□□ -1.28
PCIF1-201ENST00000372409 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
PCIF1-201ENST00000372409 MT1FP04733 61 aa6.96□□□□□ -1.29
PCIF1-201ENST00000372409 MT2AP02795 61 aa6.95□□□□□ -1.3
PCIF1-201ENST00000372409 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
PCIF1-201ENST00000372409 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
PCIF1-201ENST00000372409 SPRR5A0A1B0GTR4 108 aa6.81□□□□□ -1.32
PCIF1-201ENST00000372409 KRTAP19-8Q3LI54 63 aa6.76□□□□□ -1.33
PCIF1-201ENST00000372409 USH2AO75445 5202 aa6.75□□□□□ -1.33
PCIF1-201ENST00000372409 A0A0A0MQY5 61 aa6.71□□□□□ -1.33
PCIF1-201ENST00000372409 MT1BP07438 61 aa6.71□□□□□ -1.33
PCIF1-201ENST00000372409 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
PCIF1-201ENST00000372409 MT1XP80297 61 aa6.68□□□□□ -1.34
PCIF1-201ENST00000372409 KRTAP8-1Q8IUC2 63 aa6.63□□□□□ -1.35
PCIF1-201ENST00000372409 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
PCIF1-201ENST00000372409 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
PCIF1-201ENST00000372409 KMT2DO14686 5537 aa6.56□□□□□ -1.36
PCIF1-201ENST00000372409 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
PCIF1-201ENST00000372409 KRTAP10-7P60409 375 aaPredicted RBP6.53□□□□□ -1.36
PCIF1-201ENST00000372409 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
PCIF1-201ENST00000372409 FSIP2Q5CZC0 6907 aa6.35□□□□□ -1.39
PCIF1-201ENST00000372409 LCE2BO14633 110 aa6.34□□□□□ -1.39
PCIF1-201ENST00000372409 KRTAP19-5Q3LI72 72 aa6.26□□□□□ -1.41
PCIF1-201ENST00000372409 KRTAP4-8A0A0G2JLE6 195 aa6.16□□□□□ -1.42
PCIF1-201ENST00000372409 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
PCIF1-201ENST00000372409 LCE2AQ5TA79 106 aaPredicted RBP6.16□□□□□ -1.42
PCIF1-201ENST00000372409 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
PCIF1-201ENST00000372409 INE1O15225 51 aa6.02□□□□□ -1.45
PCIF1-201ENST00000372409 SSPOA2VEC9 5147 aa6□□□□□ -1.45
PCIF1-201ENST00000372409 KRTAP19-7Q3SYF9 63 aa5.94□□□□□ -1.46
PCIF1-201ENST00000372409 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
PCIF1-201ENST00000372409 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
PCIF1-201ENST00000372409 MT1LQ93083 61 aa5.78□□□□□ -1.48
PCIF1-201ENST00000372409 FCGBPQ9Y6R7 5405 aaPredicted RBP5.77□□□□□ -1.49
PCIF1-201ENST00000372409 MT1EP04732 61 aa5.77□□□□□ -1.49
PCIF1-201ENST00000372409 MUC12Q9UKN1 5478 aa5.77□□□□□ -1.49
PCIF1-201ENST00000372409 KRTAP19-4Q3LI73 84 aa5.67□□□□□ -1.5
PCIF1-201ENST00000372409 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
PCIF1-201ENST00000372409 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms