RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 KRTAP15-1Q3LI76 137 aa8.99□□□□□ -0.97
VEGFA-205ENST00000372067 LRP1Q07954 4544 aaKnown RBP8.98□□□□□ -0.97
VEGFA-205ENST00000372067 SPINT4Q6UDR6 99 aa8.98□□□□□ -0.97
VEGFA-205ENST00000372067 XP32Q5T750 250 aa8.96□□□□□ -0.98
VEGFA-205ENST00000372067 RPL37P61927 97 aaKnown RBP8.95□□□□□ -0.98
VEGFA-205ENST00000372067 KRTAP3-1Q9BYR8 98 aa8.93□□□□□ -0.98
VEGFA-205ENST00000372067 KIAA1109Q2LD37 5005 aa8.93□□□□□ -0.98
VEGFA-205ENST00000372067 TPRXLQ17RH7 258 aa8.93□□□□□ -0.98
VEGFA-205ENST00000372067 KRTAP17-1Q9BYP8 105 aa8.89□□□□□ -0.99
VEGFA-205ENST00000372067 A0A1B0GU33 70 aa8.89□□□□□ -0.99
VEGFA-205ENST00000372067 J3QL48 77 aa8.87□□□□□ -0.99
VEGFA-205ENST00000372067 RYR3Q15413 4870 aa8.85□□□□□ -0.99
VEGFA-205ENST00000372067 MT1HL1P0DM35 61 aa8.83□□□□□ -1
VEGFA-205ENST00000372067 C10orf95Q9H7T3 257 aa8.82□□□□□ -1
VEGFA-205ENST00000372067 MYCBP2O75592 4640 aa8.82□□□□□ -1
VEGFA-205ENST00000372067 H1FX-AS1Q4G0G2 97 aa8.8□□□□□ -1
VEGFA-205ENST00000372067 S4R3F8 94 aa8.8□□□□□ -1
VEGFA-205ENST00000372067 RYR1P21817 5038 aa8.8□□□□□ -1
VEGFA-205ENST00000372067 HSPG2P98160 4391 aa8.76□□□□□ -1.01
VEGFA-205ENST00000372067 A0A0D9SG42 100 aa8.75□□□□□ -1.01
VEGFA-205ENST00000372067 K7ERS5 55 aa8.75□□□□□ -1.01
VEGFA-205ENST00000372067 KRTAP4-5Q9BYR2 181 aa8.75□□□□□ -1.01
VEGFA-205ENST00000372067 PKHD1L1Q86WI1 4243 aa8.72□□□□□ -1.01
VEGFA-205ENST00000372067 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
VEGFA-205ENST00000372067 LUZP6Q538Z0 58 aa8.61□□□□□ -1.03
VEGFA-205ENST00000372067 EPPK1P58107 5090 aaKnown RBP8.59□□□□□ -1.03
VEGFA-205ENST00000372067 TNXBP22105 4242 aa8.59□□□□□ -1.03
VEGFA-205ENST00000372067 SEC61BP60468 96 aaKnown RBP8.54□□□□□ -1.04
VEGFA-205ENST00000372067 KRTAP3-3Q9BYR6 98 aa8.52□□□□□ -1.05
VEGFA-205ENST00000372067 KRTAP13-4Q3LI77 160 aa8.52□□□□□ -1.05
VEGFA-205ENST00000372067 LRP2P98164 4655 aa8.43□□□□□ -1.06
VEGFA-205ENST00000372067 KRTAP10-6P60371 365 aaPredicted RBP8.43□□□□□ -1.06
VEGFA-205ENST00000372067 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
VEGFA-205ENST00000372067 LPAP08519 4548 aa8.34□□□□□ -1.07
VEGFA-205ENST00000372067 M0QZ58 72 aa8.3□□□□□ -1.08
VEGFA-205ENST00000372067 ABCA13Q86UQ4 5058 aa8.3□□□□□ -1.08
VEGFA-205ENST00000372067 R4GN34 69 aa8.29□□□□□ -1.08
VEGFA-205ENST00000372067 KRTAP12-2P59991 146 aa8.28□□□□□ -1.08
VEGFA-205ENST00000372067 HERC2O95714 4834 aa8.24□□□□□ -1.09
VEGFA-205ENST00000372067 KRTAP4-1Q9BYQ7 146 aa8.18□□□□□ -1.1
VEGFA-205ENST00000372067 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
VEGFA-205ENST00000372067 PLAC4Q8WY50 150 aa8.03□□□□□ -1.12
VEGFA-205ENST00000372067 BIRC6Q9NR09 4857 aa8.01□□□□□ -1.13
VEGFA-205ENST00000372067 M0R2T5 61 aa8.01□□□□□ -1.13
VEGFA-205ENST00000372067 LORP23490 312 aaPredicted RBP7.97□□□□□ -1.13
VEGFA-205ENST00000372067 CAMK2N1Q7Z7J9 78 aa7.97□□□□□ -1.13
VEGFA-205ENST00000372067 MUC2Q02817 5179 aa7.85□□□□□ -1.15
VEGFA-205ENST00000372067 HERC1Q15751 4861 aa7.8□□□□□ -1.16
VEGFA-205ENST00000372067 MUC17Q685J3 4493 aa7.74□□□□□ -1.17
VEGFA-205ENST00000372067 PCLOQ9Y6V0 5065 aa7.74□□□□□ -1.17
VEGFA-205ENST00000372067 KRTAP19-2Q3LHN2 52 aa7.7□□□□□ -1.18
VEGFA-205ENST00000372067 KRTAP10-10P60014 251 aa7.58□□□□□ -1.2
VEGFA-205ENST00000372067 HMCN2Q8NDA2 5059 aa7.57□□□□□ -1.2
VEGFA-205ENST00000372067 RNF213Q63HN8 5207 aa7.53□□□□□ -1.2
VEGFA-205ENST00000372067 FAT4Q6V0I7 4981 aa7.51□□□□□ -1.21
VEGFA-205ENST00000372067 FLGP20930 4061 aaPredicted RBP7.49□□□□□ -1.21
VEGFA-205ENST00000372067 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
VEGFA-205ENST00000372067 UBR4Q5T4S7 5183 aa7.46□□□□□ -1.22
VEGFA-205ENST00000372067 TNP1P09430 55 aa7.45□□□□□ -1.22
VEGFA-205ENST00000372067 PRO2289Q9P1D8 64 aa7.44□□□□□ -1.22
VEGFA-205ENST00000372067 MT1HP80294 61 aa7.43□□□□□ -1.22
VEGFA-205ENST00000372067 SPRR5A0A1B0GTR4 108 aa7.35□□□□□ -1.23
VEGFA-205ENST00000372067 PP632Q6XCG6 107 aa7.3□□□□□ -1.24
VEGFA-205ENST00000372067 MT2AP02795 61 aa7.28□□□□□ -1.24
VEGFA-205ENST00000372067 MT1FP04733 61 aa7.28□□□□□ -1.24
VEGFA-205ENST00000372067 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
VEGFA-205ENST00000372067 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
VEGFA-205ENST00000372067 KRTAP9-8Q9BYQ0 159 aa7.13□□□□□ -1.27
VEGFA-205ENST00000372067 INE1O15225 51 aa7.03□□□□□ -1.28
VEGFA-205ENST00000372067 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
VEGFA-205ENST00000372067 MT1BP07438 61 aa6.9□□□□□ -1.3
VEGFA-205ENST00000372067 KRTAP19-8Q3LI54 63 aa6.9□□□□□ -1.3
VEGFA-205ENST00000372067 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
VEGFA-205ENST00000372067 KRTAP9-3Q9BYQ3 159 aa6.84□□□□□ -1.31
VEGFA-205ENST00000372067 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
VEGFA-205ENST00000372067 MT1XP80297 61 aa6.81□□□□□ -1.32
VEGFA-205ENST00000372067 KRTAP10-5P60370 271 aa6.8□□□□□ -1.32
VEGFA-205ENST00000372067 KRTAP10-7P60409 375 aaPredicted RBP6.71□□□□□ -1.34
VEGFA-205ENST00000372067 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
VEGFA-205ENST00000372067 LCE2BO14633 110 aa6.67□□□□□ -1.34
VEGFA-205ENST00000372067 USH2AO75445 5202 aa6.61□□□□□ -1.35
VEGFA-205ENST00000372067 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
VEGFA-205ENST00000372067 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
VEGFA-205ENST00000372067 FSIP2Q5CZC0 6907 aa6.48□□□□□ -1.37
VEGFA-205ENST00000372067 KRTAP19-5Q3LI72 72 aa6.44□□□□□ -1.38
VEGFA-205ENST00000372067 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
VEGFA-205ENST00000372067 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
VEGFA-205ENST00000372067 KMT2DO14686 5537 aa6.38□□□□□ -1.39
VEGFA-205ENST00000372067 LCE2DQ5TA82 110 aaPredicted RBP6.19□□□□□ -1.42
VEGFA-205ENST00000372067 LCE3CQ5T5A8 94 aa6.16□□□□□ -1.42
VEGFA-205ENST00000372067 SSPOA2VEC9 5147 aa6.08□□□□□ -1.44
VEGFA-205ENST00000372067 KRTAP4-7Q9BYR0 210 aa6.07□□□□□ -1.44
VEGFA-205ENST00000372067 KRTAP19-7Q3SYF9 63 aa6.03□□□□□ -1.44
VEGFA-205ENST00000372067 KRTAP19-6Q3LI70 58 aa5.97□□□□□ -1.45
VEGFA-205ENST00000372067 MT1EP04732 61 aa5.93□□□□□ -1.46
VEGFA-205ENST00000372067 MT1LQ93083 61 aa5.9□□□□□ -1.46
VEGFA-205ENST00000372067 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.46
VEGFA-205ENST00000372067 KRTAP9-6A8MVA2 160 aa5.88□□□□□ -1.47
VEGFA-205ENST00000372067 KRTAP2-3P0C7H8 128 aa5.82□□□□□ -1.48
VEGFA-205ENST00000372067 KRTAP2-4Q9BYR9 128 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms