RNA–Protein interactions for RNA: ENST00000371804.3

IFIT1-201, Transcript of interferon induced protein with tetratricopeptide repeats 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFIT1, Length 1,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIT1-201ENST00000371804 DEFB131AP59861 70 aa3.35□□□□□ -1.87
IFIT1-201ENST00000371804 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
IFIT1-201ENST00000371804 PSORS1C2Q9UIG4 136 aa3.35□□□□□ -1.87
IFIT1-201ENST00000371804 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.87
IFIT1-201ENST00000371804 IGFL1Q6UW32 110 aa3.34□□□□□ -1.87
IFIT1-201ENST00000371804 VPS13BQ7Z7G8 4022 aa3.34□□□□□ -1.88
IFIT1-201ENST00000371804 UBR4Q5T4S7 5183 aa3.33□□□□□ -1.88
IFIT1-201ENST00000371804 UBE2DNLQ8IWF7 75 aa3.33□□□□□ -1.88
IFIT1-201ENST00000371804 GIG44P09565 113 aaPredicted RBP3.33□□□□□ -1.88
IFIT1-201ENST00000371804 Q6ZRX8 168 aa3.33□□□□□ -1.88
IFIT1-201ENST00000371804 A0A1B0GU33 70 aa3.31□□□□□ -1.88
IFIT1-201ENST00000371804 C16orf74Q96GX8 76 aa3.31□□□□□ -1.88
IFIT1-201ENST00000371804 ANAPC11Q9NYG5 84 aa3.3□□□□□ -1.88
IFIT1-201ENST00000371804 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
IFIT1-201ENST00000371804 FLG2Q5D862 2391 aaPredicted RBP3.29□□□□□ -1.88
IFIT1-201ENST00000371804 H0YAA0 97 aa3.28□□□□□ -1.88
IFIT1-201ENST00000371804 MRPL34Q9BQ48 92 aaKnown RBP3.28□□□□□ -1.88
IFIT1-201ENST00000371804 A0A0G2JQZ4 141 aa3.28□□□□□ -1.88
IFIT1-201ENST00000371804 SPART-AS1P0CW21 52 aa3.28□□□□□ -1.88
IFIT1-201ENST00000371804 KRTAP10-2P60368 255 aa3.28□□□□□ -1.88
IFIT1-201ENST00000371804 NOP10Q9NPE3 64 aaKnown RBP3.28□□□□□ -1.88
IFIT1-201ENST00000371804 HTN3P15516 51 aa3.27□□□□□ -1.89
IFIT1-201ENST00000371804 SRRM2Q9UQ35 2752 aaKnown RBP3.26□□□□□ -1.89
IFIT1-201ENST00000371804 TPRXLQ17RH7 258 aa3.26□□□□□ -1.89
IFIT1-201ENST00000371804 Q5VSD8 79 aa3.26□□□□□ -1.89
IFIT1-201ENST00000371804 KRTAP23-1A1A580 65 aa3.25□□□□□ -1.89
IFIT1-201ENST00000371804 DNAH8Q96JB1 4490 aa3.25□□□□□ -1.89
IFIT1-201ENST00000371804 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
IFIT1-201ENST00000371804 KRTAP1-5Q9BYS1 174 aa3.24□□□□□ -1.89
IFIT1-201ENST00000371804 FAT3Q8TDW7 4589 aa3.23□□□□□ -1.89
IFIT1-201ENST00000371804 LRP1Q07954 4544 aaKnown RBP3.23□□□□□ -1.89
IFIT1-201ENST00000371804 SPRR1AP35321 89 aa3.23□□□□□ -1.89
IFIT1-201ENST00000371804 Q6ZSA8 131 aa3.23□□□□□ -1.89
IFIT1-201ENST00000371804 SMR3BP02814 79 aaPredicted RBP3.22□□□□□ -1.89
IFIT1-201ENST00000371804 KRTAP10-1P60331 282 aa3.21□□□□□ -1.9
IFIT1-201ENST00000371804 DEFB130BP0DP73 79 aa3.2□□□□□ -1.9
IFIT1-201ENST00000371804 DEFB130AP0DP74 79 aa3.2□□□□□ -1.9
IFIT1-201ENST00000371804 H1FX-AS1Q4G0G2 97 aa3.2□□□□□ -1.9
IFIT1-201ENST00000371804 Q6ZRN7 208 aaPredicted RBP3.2□□□□□ -1.9
IFIT1-201ENST00000371804 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
IFIT1-201ENST00000371804 KRTAP13-3Q3SY46 172 aa3.18□□□□□ -1.9
IFIT1-201ENST00000371804 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
IFIT1-201ENST00000371804 PKHD1L1Q86WI1 4243 aa3.17□□□□□ -1.9
IFIT1-201ENST00000371804 A0A096LPF7 62 aa3.17□□□□□ -1.9
IFIT1-201ENST00000371804 PRLHP81277 87 aa3.17□□□□□ -1.9
IFIT1-201ENST00000371804 C10orf95Q9H7T3 257 aa3.17□□□□□ -1.9
IFIT1-201ENST00000371804 LRP2P98164 4655 aa3.17□□□□□ -1.9
IFIT1-201ENST00000371804 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
IFIT1-201ENST00000371804 PRO0255Q9UI72 69 aa3.16□□□□□ -1.9
IFIT1-201ENST00000371804 SPINK1P00995 79 aa3.16□□□□□ -1.9
IFIT1-201ENST00000371804 C14orf177Q52M58 125 aa3.16□□□□□ -1.9
IFIT1-201ENST00000371804 H3BNG1 76 aa3.15□□□□□ -1.91
IFIT1-201ENST00000371804 IGKV2-30P06310 120 aa3.15□□□□□ -1.91
IFIT1-201ENST00000371804 LELP1Q5T871 98 aa3.14□□□□□ -1.91
IFIT1-201ENST00000371804 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
IFIT1-201ENST00000371804 R4GN34 69 aa3.14□□□□□ -1.91
IFIT1-201ENST00000371804 RNF213Q63HN8 5207 aa3.14□□□□□ -1.91
IFIT1-201ENST00000371804 IGKV2D-30A0A075B6S6 120 aa3.13□□□□□ -1.91
IFIT1-201ENST00000371804 SPRR1BP22528 89 aa3.13□□□□□ -1.91
IFIT1-201ENST00000371804 RPL37P61927 97 aaKnown RBP3.13□□□□□ -1.91
IFIT1-201ENST00000371804 TNXBP22105 4242 aa3.13□□□□□ -1.91
IFIT1-201ENST00000371804 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
IFIT1-201ENST00000371804 COX6B2Q6YFQ2 88 aa3.12□□□□□ -1.91
IFIT1-201ENST00000371804 SPACA4Q8TDM5 124 aa3.12□□□□□ -1.91
IFIT1-201ENST00000371804 KRTAP10-4P60372 401 aaPredicted RBP3.1□□□□□ -1.91
IFIT1-201ENST00000371804 A0A096LNI7 61 aa3.07□□□□□ -1.92
IFIT1-201ENST00000371804 TYMSOSQ8TAI1 123 aa3.07□□□□□ -1.92
IFIT1-201ENST00000371804 MT1HL1P0DM35 61 aa3.06□□□□□ -1.92
IFIT1-201ENST00000371804 LINC01556Q5JQF7 62 aa3.05□□□□□ -1.92
IFIT1-201ENST00000371804 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
IFIT1-201ENST00000371804 LPAP08519 4548 aa3.02□□□□□ -1.93
IFIT1-201ENST00000371804 INE1O15225 51 aa3.01□□□□□ -1.93
IFIT1-201ENST00000371804 KRTAP7-1Q8IUC3 87 aa3□□□□□ -1.93
IFIT1-201ENST00000371804 SPINK6Q6UWN8 80 aa2.99□□□□□ -1.93
IFIT1-201ENST00000371804 FAT4Q6V0I7 4981 aa2.99□□□□□ -1.93
IFIT1-201ENST00000371804 A0A0D9SG42 100 aa2.97□□□□□ -1.93
IFIT1-201ENST00000371804 S4R3F8 94 aa2.96□□□□□ -1.94
IFIT1-201ENST00000371804 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
IFIT1-201ENST00000371804 MUC2Q02817 5179 aa2.94□□□□□ -1.94
IFIT1-201ENST00000371804 KRTAP10-8P60410 259 aa2.94□□□□□ -1.94
IFIT1-201ENST00000371804 KRTAP12-2P59991 146 aa2.88□□□□□ -1.95
IFIT1-201ENST00000371804 MUC17Q685J3 4493 aa2.85□□□□□ -1.95
IFIT1-201ENST00000371804 KRTAP13-4Q3LI77 160 aa2.84□□□□□ -1.95
IFIT1-201ENST00000371804 KRTAP13-1Q8IUC0 172 aa2.84□□□□□ -1.95
IFIT1-201ENST00000371804 PP632Q6XCG6 107 aa2.84□□□□□ -1.96
IFIT1-201ENST00000371804 FSIP2Q5CZC0 6907 aa2.8□□□□□ -1.96
IFIT1-201ENST00000371804 CRCT1Q9UGL9 99 aa2.8□□□□□ -1.96
IFIT1-201ENST00000371804 KRTAP10-6P60371 365 aaPredicted RBP2.79□□□□□ -1.96
IFIT1-201ENST00000371804 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
IFIT1-201ENST00000371804 KRTAP1-4P0C5Y4 121 aa2.77□□□□□ -1.97
IFIT1-201ENST00000371804 KRTAP3-1Q9BYR8 98 aa2.76□□□□□ -1.97
IFIT1-201ENST00000371804 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
IFIT1-201ENST00000371804 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
IFIT1-201ENST00000371804 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
IFIT1-201ENST00000371804 M0QZ58 72 aa2.68□□□□□ -1.98
IFIT1-201ENST00000371804 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
IFIT1-201ENST00000371804 KRTAP13-2Q52LG2 175 aa2.67□□□□□ -1.98
IFIT1-201ENST00000371804 KRTAP4-3Q9BYR4 195 aa2.67□□□□□ -1.98
IFIT1-201ENST00000371804 MT1HP80294 61 aa2.62□□□□□ -1.99
IFIT1-201ENST00000371804 KRTAP19-2Q3LHN2 52 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms