RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 NREPQ16612 68 aa2.03□□□□□ -2.08
MCF2-202ENST00000370573 C7orf65Q6ZTY9 151 aa2.03□□□□□ -2.08
MCF2-202ENST00000370573 MT1HL1P0DM35 61 aa2.03□□□□□ -2.09
MCF2-202ENST00000370573 LCE3CQ5T5A8 94 aa2.02□□□□□ -2.09
MCF2-202ENST00000370573 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
MCF2-202ENST00000370573 A0A087WSZ3 146 aa2.02□□□□□ -2.09
MCF2-202ENST00000370573 DMBT1Q9UGM3 2413 aaPredicted RBP2.01□□□□□ -2.09
MCF2-202ENST00000370573 BPY2O14599 106 aa2.01□□□□□ -2.09
MCF2-202ENST00000370573 LINC00304Q8N9R0 145 aa2.01□□□□□ -2.09
MCF2-202ENST00000370573 SNURFQ9Y675 71 aa2.01□□□□□ -2.09
MCF2-202ENST00000370573 TRAV22A0A0B4J277 110 aa2.01□□□□□ -2.09
MCF2-202ENST00000370573 A6NN06 94 aa2□□□□□ -2.09
MCF2-202ENST00000370573 Q96NJ1 140 aa2□□□□□ -2.09
MCF2-202ENST00000370573 LINC00472Q9H8W2 130 aa2□□□□□ -2.09
MCF2-202ENST00000370573 KRTAP9-6A8MVA2 160 aa2□□□□□ -2.09
MCF2-202ENST00000370573 SPINK1P00995 79 aa2□□□□□ -2.09
MCF2-202ENST00000370573 DEFB116Q30KQ4 102 aa2□□□□□ -2.09
MCF2-202ENST00000370573 SPAG11AQ6PDA7 123 aa2□□□□□ -2.09
MCF2-202ENST00000370573 LOC101927531A0A1B0GV80 90 aa1.99□□□□□ -2.09
MCF2-202ENST00000370573 MP68P56378 58 aa1.99□□□□□ -2.09
MCF2-202ENST00000370573 SPANXA2-OT1Q8N9U9 137 aa1.99□□□□□ -2.09
MCF2-202ENST00000370573 CDC42SE1Q9NRR8 79 aa1.99□□□□□ -2.09
MCF2-202ENST00000370573 H3BPC8 53 aa1.99□□□□□ -2.09
MCF2-202ENST00000370573 LUZP6Q538Z0 58 aa1.99□□□□□ -2.09
MCF2-202ENST00000370573 DSCR10P59022 87 aa1.98□□□□□ -2.09
MCF2-202ENST00000370573 RPS29P62273 56 aaKnown RBP1.98□□□□□ -2.09
MCF2-202ENST00000370573 C1orf64Q8NEQ6 169 aa1.98□□□□□ -2.09
MCF2-202ENST00000370573 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
MCF2-202ENST00000370573 A8MUN3 132 aa1.98□□□□□ -2.09
MCF2-202ENST00000370573 Q5VV11 94 aa1.98□□□□□ -2.09
MCF2-202ENST00000370573 ZCCHC13Q8WW36 166 aaKnown RBP1.98□□□□□ -2.09
MCF2-202ENST00000370573 IGKV4-1P06312 121 aa1.97□□□□□ -2.09
MCF2-202ENST00000370573 Q8N9L7 120 aa1.97□□□□□ -2.09
MCF2-202ENST00000370573 RETNLBQ9BQ08 111 aa1.97□□□□□ -2.09
MCF2-202ENST00000370573 HCG22E2RYF7 251 aa1.97□□□□□ -2.09
MCF2-202ENST00000370573 CHKB-CPT1BH3BT56 60 aa1.97□□□□□ -2.09
MCF2-202ENST00000370573 K7EQZ3 153 aa1.96□□□□□ -2.1
MCF2-202ENST00000370573 ADM2Q7Z4H4 148 aa1.96□□□□□ -2.1
MCF2-202ENST00000370573 A8MWP4 228 aa1.96□□□□□ -2.1
MCF2-202ENST00000370573 LINC00313P59037 77 aa1.96□□□□□ -2.1
MCF2-202ENST00000370573 LINC01554Q52M75 96 aa1.96□□□□□ -2.1
MCF2-202ENST00000370573 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
MCF2-202ENST00000370573 CASC2Q6XLA1 102 aa1.95□□□□□ -2.1
MCF2-202ENST00000370573 HERC1Q15751 4861 aa1.95□□□□□ -2.1
MCF2-202ENST00000370573 A6NED7 52 aa1.94□□□□□ -2.1
MCF2-202ENST00000370573 LINC00208Q96KT6 92 aa1.94□□□□□ -2.1
MCF2-202ENST00000370573 MMP24-AS1A0A0U1RRL7 71 aa1.93□□□□□ -2.1
MCF2-202ENST00000370573 SPTSSBQ8NFR3 76 aa1.93□□□□□ -2.1
MCF2-202ENST00000370573 LINC01558Q9Y6Z2 57 aa1.93□□□□□ -2.1
MCF2-202ENST00000370573 C9orf92A6NGG3 77 aa1.92□□□□□ -2.1
MCF2-202ENST00000370573 WFDC13Q8IUB5 93 aa1.92□□□□□ -2.1
MCF2-202ENST00000370573 PRR15LQ9BU68 103 aa1.92□□□□□ -2.1
MCF2-202ENST00000370573 KRTAP13-3Q3SY46 172 aa1.92□□□□□ -2.1
MCF2-202ENST00000370573 Q5W150 140 aa1.92□□□□□ -2.1
MCF2-202ENST00000370573 LPAP08519 4548 aa1.92□□□□□ -2.1
MCF2-202ENST00000370573 HMCN2Q8NDA2 5059 aa1.91□□□□□ -2.1
MCF2-202ENST00000370573 MRPL34Q9BQ48 92 aaKnown RBP1.9□□□□□ -2.11
MCF2-202ENST00000370573 LRP2P98164 4655 aa1.9□□□□□ -2.11
MCF2-202ENST00000370573 A8MUU9 505 aa1.89□□□□□ -2.11
MCF2-202ENST00000370573 TPRXLQ17RH7 258 aa1.89□□□□□ -2.11
MCF2-202ENST00000370573 C20orf166-AS1Q96NR2 134 aa1.89□□□□□ -2.11
MCF2-202ENST00000370573 COA5Q86WW8 74 aa1.87□□□□□ -2.11
MCF2-202ENST00000370573 H0Y9P7 68 aa1.87□□□□□ -2.11
MCF2-202ENST00000370573 RPL37P61927 97 aaKnown RBP1.87□□□□□ -2.11
MCF2-202ENST00000370573 TP53AIP1Q9HCN2 124 aa1.86□□□□□ -2.11
MCF2-202ENST00000370573 MUC17Q685J3 4493 aa1.86□□□□□ -2.11
MCF2-202ENST00000370573 A8MU10 97 aa1.85□□□□□ -2.11
MCF2-202ENST00000370573 PCOTHQ58A44 107 aa1.85□□□□□ -2.11
MCF2-202ENST00000370573 K7ERS5 55 aa1.85□□□□□ -2.11
MCF2-202ENST00000370573 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
MCF2-202ENST00000370573 SPATA8Q6RVD6 105 aa1.84□□□□□ -2.11
MCF2-202ENST00000370573 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.12
MCF2-202ENST00000370573 UBR4Q5T4S7 5183 aa1.82□□□□□ -2.12
MCF2-202ENST00000370573 SPINK7P58062 85 aa1.82□□□□□ -2.12
MCF2-202ENST00000370573 RNF213Q63HN8 5207 aa1.82□□□□□ -2.12
MCF2-202ENST00000370573 ROMO1P60602 79 aa1.82□□□□□ -2.12
MCF2-202ENST00000370573 UQCR11O14957 56 aa1.81□□□□□ -2.12
MCF2-202ENST00000370573 HRES1P13985 223 aa1.8□□□□□ -2.12
MCF2-202ENST00000370573 MUC2Q02817 5179 aa1.8□□□□□ -2.12
MCF2-202ENST00000370573 ACYP2P14621 99 aa1.79□□□□□ -2.12
MCF2-202ENST00000370573 MIR22HGQ0VDD5 57 aa1.79□□□□□ -2.12
MCF2-202ENST00000370573 CSAG1Q6PB30 78 aa1.79□□□□□ -2.12
MCF2-202ENST00000370573 A0A1B0GU69 56 aa1.78□□□□□ -2.12
MCF2-202ENST00000370573 KRTAP19-2Q3LHN2 52 aa1.78□□□□□ -2.12
MCF2-202ENST00000370573 KRTAP12-2P59991 146 aa1.78□□□□□ -2.12
MCF2-202ENST00000370573 KRTAP25-1Q3LHN0 102 aa1.78□□□□□ -2.12
MCF2-202ENST00000370573 DMAC1Q96GE9 116 aa1.77□□□□□ -2.13
MCF2-202ENST00000370573 COX6B2Q6YFQ2 88 aa1.76□□□□□ -2.13
MCF2-202ENST00000370573 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
MCF2-202ENST00000370573 FLGP20930 4061 aaPredicted RBP1.75□□□□□ -2.13
MCF2-202ENST00000370573 FAT4Q6V0I7 4981 aa1.74□□□□□ -2.13
MCF2-202ENST00000370573 KRTAP4-3Q9BYR4 195 aa1.74□□□□□ -2.13
MCF2-202ENST00000370573 H1FX-AS1Q4G0G2 97 aa1.73□□□□□ -2.13
MCF2-202ENST00000370573 A0A1B0GU33 70 aa1.73□□□□□ -2.13
MCF2-202ENST00000370573 R4GN34 69 aa1.73□□□□□ -2.13
MCF2-202ENST00000370573 OBSCNQ5VST9 7968 aa1.72□□□□□ -2.13
MCF2-202ENST00000370573 LCE3AQ5TA76 89 aa1.71□□□□□ -2.14
MCF2-202ENST00000370573 CRCT1Q9UGL9 99 aa1.71□□□□□ -2.14
MCF2-202ENST00000370573 MT1HP80294 61 aa1.7□□□□□ -2.14
MCF2-202ENST00000370573 SPINT4Q6UDR6 99 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms