RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 P0C880 135 aa5.43□□□□□ -1.54
PRPF38B-203ENST00000370025 SPINT4Q6UDR6 99 aa5.43□□□□□ -1.54
PRPF38B-203ENST00000370025 A0A1B0GU33 70 aa5.41□□□□□ -1.54
PRPF38B-203ENST00000370025 A0A0D9SG42 100 aa5.4□□□□□ -1.55
PRPF38B-203ENST00000370025 C20orf166-AS1Q96NR2 134 aa5.4□□□□□ -1.55
PRPF38B-203ENST00000370025 KIAA1109Q2LD37 5005 aa5.4□□□□□ -1.55
PRPF38B-203ENST00000370025 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
PRPF38B-203ENST00000370025 MT1HL1P0DM35 61 aa5.37□□□□□ -1.55
PRPF38B-203ENST00000370025 TNXBP22105 4242 aa5.36□□□□□ -1.55
PRPF38B-203ENST00000370025 EPPK1P58107 5090 aaKnown RBP5.35□□□□□ -1.55
PRPF38B-203ENST00000370025 K7ERS5 55 aa5.34□□□□□ -1.55
PRPF38B-203ENST00000370025 NDUFAF8A1L188 74 aa5.34□□□□□ -1.56
PRPF38B-203ENST00000370025 FAT3Q8TDW7 4589 aa5.33□□□□□ -1.56
PRPF38B-203ENST00000370025 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
PRPF38B-203ENST00000370025 H1FX-AS1Q4G0G2 97 aa5.31□□□□□ -1.56
PRPF38B-203ENST00000370025 KRTAP4-5Q9BYR2 181 aa5.29□□□□□ -1.56
PRPF38B-203ENST00000370025 RPL37P61927 97 aaKnown RBP5.26□□□□□ -1.57
PRPF38B-203ENST00000370025 XP32Q5T750 250 aa5.26□□□□□ -1.57
PRPF38B-203ENST00000370025 MYCBP2O75592 4640 aa5.25□□□□□ -1.57
PRPF38B-203ENST00000370025 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
PRPF38B-203ENST00000370025 TPRXLQ17RH7 258 aa5.21□□□□□ -1.57
PRPF38B-203ENST00000370025 J3QL48 77 aa5.21□□□□□ -1.58
PRPF38B-203ENST00000370025 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
PRPF38B-203ENST00000370025 KRTAP13-4Q3LI77 160 aa5.12□□□□□ -1.59
PRPF38B-203ENST00000370025 BIRC6Q9NR09 4857 aa5.12□□□□□ -1.59
PRPF38B-203ENST00000370025 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
PRPF38B-203ENST00000370025 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
PRPF38B-203ENST00000370025 HERC2O95714 4834 aa5.08□□□□□ -1.6
PRPF38B-203ENST00000370025 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
PRPF38B-203ENST00000370025 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
PRPF38B-203ENST00000370025 S4R3F8 94 aa5.04□□□□□ -1.6
PRPF38B-203ENST00000370025 LCE2DQ5TA82 110 aaPredicted RBP5.03□□□□□ -1.6
PRPF38B-203ENST00000370025 LRP2P98164 4655 aa5.01□□□□□ -1.61
PRPF38B-203ENST00000370025 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
PRPF38B-203ENST00000370025 LPAP08519 4548 aa5□□□□□ -1.61
PRPF38B-203ENST00000370025 KRTAP12-2P59991 146 aa4.99□□□□□ -1.61
PRPF38B-203ENST00000370025 KRTAP3-3Q9BYR6 98 aa4.93□□□□□ -1.62
PRPF38B-203ENST00000370025 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
PRPF38B-203ENST00000370025 KRTAP3-2Q9BYR7 98 aa4.91□□□□□ -1.62
PRPF38B-203ENST00000370025 M0QZ58 72 aa4.88□□□□□ -1.63
PRPF38B-203ENST00000370025 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
PRPF38B-203ENST00000370025 R4GN34 69 aa4.87□□□□□ -1.63
PRPF38B-203ENST00000370025 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
PRPF38B-203ENST00000370025 PCLOQ9Y6V0 5065 aa4.84□□□□□ -1.63
PRPF38B-203ENST00000370025 MUC17Q685J3 4493 aa4.81□□□□□ -1.64
PRPF38B-203ENST00000370025 CAMK2N1Q7Z7J9 78 aa4.78□□□□□ -1.64
PRPF38B-203ENST00000370025 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
PRPF38B-203ENST00000370025 HERC1Q15751 4861 aa4.77□□□□□ -1.65
PRPF38B-203ENST00000370025 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
PRPF38B-203ENST00000370025 HMCN2Q8NDA2 5059 aa4.75□□□□□ -1.65
PRPF38B-203ENST00000370025 MUC2Q02817 5179 aa4.63□□□□□ -1.67
PRPF38B-203ENST00000370025 M0R2T5 61 aa4.61□□□□□ -1.67
PRPF38B-203ENST00000370025 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
PRPF38B-203ENST00000370025 LCE2CQ5TA81 110 aa4.59□□□□□ -1.67
PRPF38B-203ENST00000370025 LORP23490 312 aaPredicted RBP4.56□□□□□ -1.68
PRPF38B-203ENST00000370025 RNF213Q63HN8 5207 aa4.52□□□□□ -1.69
PRPF38B-203ENST00000370025 MT1HP80294 61 aa4.51□□□□□ -1.69
PRPF38B-203ENST00000370025 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
PRPF38B-203ENST00000370025 FAT4Q6V0I7 4981 aa4.44□□□□□ -1.7
PRPF38B-203ENST00000370025 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
PRPF38B-203ENST00000370025 MT2AP02795 61 aa4.36□□□□□ -1.71
PRPF38B-203ENST00000370025 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
PRPF38B-203ENST00000370025 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
PRPF38B-203ENST00000370025 MT1FP04733 61 aa4.34□□□□□ -1.71
PRPF38B-203ENST00000370025 TNP1P09430 55 aa4.34□□□□□ -1.72
PRPF38B-203ENST00000370025 PP632Q6XCG6 107 aa4.34□□□□□ -1.72
PRPF38B-203ENST00000370025 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
PRPF38B-203ENST00000370025 LCE2AQ5TA79 106 aaPredicted RBP4.21□□□□□ -1.74
PRPF38B-203ENST00000370025 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
PRPF38B-203ENST00000370025 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
PRPF38B-203ENST00000370025 MT1BP07438 61 aa4.14□□□□□ -1.75
PRPF38B-203ENST00000370025 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
PRPF38B-203ENST00000370025 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
PRPF38B-203ENST00000370025 LCE2BO14633 110 aa4.08□□□□□ -1.76
PRPF38B-203ENST00000370025 KRTAP23-1A1A580 65 aa4.05□□□□□ -1.76
PRPF38B-203ENST00000370025 MT1XP80297 61 aa4.04□□□□□ -1.76
PRPF38B-203ENST00000370025 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
PRPF38B-203ENST00000370025 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
PRPF38B-203ENST00000370025 FSIP2Q5CZC0 6907 aa3.96□□□□□ -1.77
PRPF38B-203ENST00000370025 INE1O15225 51 aa3.95□□□□□ -1.78
PRPF38B-203ENST00000370025 USH2AO75445 5202 aa3.91□□□□□ -1.78
PRPF38B-203ENST00000370025 KRTAP10-12P60413 245 aa3.9□□□□□ -1.78
PRPF38B-203ENST00000370025 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
PRPF38B-203ENST00000370025 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
PRPF38B-203ENST00000370025 KMT2DO14686 5537 aa3.85□□□□□ -1.79
PRPF38B-203ENST00000370025 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
PRPF38B-203ENST00000370025 KRTAP19-6Q3LI70 58 aa3.77□□□□□ -1.81
PRPF38B-203ENST00000370025 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
PRPF38B-203ENST00000370025 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
PRPF38B-203ENST00000370025 KRTAP4-8A0A0G2JLE6 195 aa3.71□□□□□ -1.82
PRPF38B-203ENST00000370025 KRTAP4-8Q9BYQ9 185 aa3.71□□□□□ -1.82
PRPF38B-203ENST00000370025 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
PRPF38B-203ENST00000370025 CRCT1Q9UGL9 99 aa3.69□□□□□ -1.82
PRPF38B-203ENST00000370025 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
PRPF38B-203ENST00000370025 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
PRPF38B-203ENST00000370025 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
PRPF38B-203ENST00000370025 KRTAP9-2Q9BYQ4 174 aa3.57□□□□□ -1.84
PRPF38B-203ENST00000370025 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
PRPF38B-203ENST00000370025 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
PRPF38B-203ENST00000370025 MT1EP04732 61 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms