RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
HIPK1-206ENST00000369559 A0A0D9SG42 100 aa5.23□□□□□ -1.57
HIPK1-206ENST00000369559 DYNC1H1Q14204 4646 aaKnown RBP5.23□□□□□ -1.57
HIPK1-206ENST00000369559 EPPK1P58107 5090 aaKnown RBP5.21□□□□□ -1.57
HIPK1-206ENST00000369559 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
HIPK1-206ENST00000369559 KRTAP3-3Q9BYR6 98 aa5.19□□□□□ -1.58
HIPK1-206ENST00000369559 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
HIPK1-206ENST00000369559 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
HIPK1-206ENST00000369559 NDUFAF8A1L188 74 aa5.17□□□□□ -1.58
HIPK1-206ENST00000369559 A0A0A0MQY5 61 aa5.14□□□□□ -1.59
HIPK1-206ENST00000369559 SMR3BP02814 79 aaPredicted RBP5.14□□□□□ -1.59
HIPK1-206ENST00000369559 APOBP04114 4563 aaKnown RBP5.14□□□□□ -1.59
HIPK1-206ENST00000369559 S4R3F8 94 aa5.13□□□□□ -1.59
HIPK1-206ENST00000369559 PKHD1L1Q86WI1 4243 aa5.13□□□□□ -1.59
HIPK1-206ENST00000369559 KIAA1109Q2LD37 5005 aa5.12□□□□□ -1.59
HIPK1-206ENST00000369559 DMBT1Q9UGM3 2413 aaPredicted RBP5.11□□□□□ -1.59
HIPK1-206ENST00000369559 FAT1Q14517 4588 aa5.1□□□□□ -1.59
HIPK1-206ENST00000369559 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
HIPK1-206ENST00000369559 RYR1P21817 5038 aa5.08□□□□□ -1.6
HIPK1-206ENST00000369559 HSPG2P98160 4391 aa5.08□□□□□ -1.6
HIPK1-206ENST00000369559 BIRC6Q9NR09 4857 aa5.07□□□□□ -1.6
HIPK1-206ENST00000369559 KRTAP17-1Q9BYP8 105 aa5.04□□□□□ -1.6
HIPK1-206ENST00000369559 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
HIPK1-206ENST00000369559 KRTAP10-4P60372 401 aaPredicted RBP5.04□□□□□ -1.6
HIPK1-206ENST00000369559 KRTAP10-8P60410 259 aa5.03□□□□□ -1.6
HIPK1-206ENST00000369559 Q5VSD8 79 aa5.03□□□□□ -1.6
HIPK1-206ENST00000369559 XP32Q5T750 250 aa5.03□□□□□ -1.6
HIPK1-206ENST00000369559 KRTAP4-5Q9BYR2 181 aa4.97□□□□□ -1.61
HIPK1-206ENST00000369559 HERC2O95714 4834 aa4.96□□□□□ -1.62
HIPK1-206ENST00000369559 M0QZ58 72 aa4.94□□□□□ -1.62
HIPK1-206ENST00000369559 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
HIPK1-206ENST00000369559 LRP1Q07954 4544 aaKnown RBP4.93□□□□□ -1.62
HIPK1-206ENST00000369559 ABCA13Q86UQ4 5058 aa4.9□□□□□ -1.62
HIPK1-206ENST00000369559 TNXBP22105 4242 aa4.89□□□□□ -1.63
HIPK1-206ENST00000369559 MYCBP2O75592 4640 aa4.89□□□□□ -1.63
HIPK1-206ENST00000369559 PCLOQ9Y6V0 5065 aa4.82□□□□□ -1.64
HIPK1-206ENST00000369559 PLAC4Q8WY50 150 aa4.82□□□□□ -1.64
HIPK1-206ENST00000369559 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
HIPK1-206ENST00000369559 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
HIPK1-206ENST00000369559 R4GN34 69 aa4.76□□□□□ -1.65
HIPK1-206ENST00000369559 LPAP08519 4548 aa4.72□□□□□ -1.65
HIPK1-206ENST00000369559 HERC1Q15751 4861 aa4.68□□□□□ -1.66
HIPK1-206ENST00000369559 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
HIPK1-206ENST00000369559 LORP23490 312 aaPredicted RBP4.63□□□□□ -1.67
HIPK1-206ENST00000369559 LRP2P98164 4655 aa4.63□□□□□ -1.67
HIPK1-206ENST00000369559 CAMK2N1Q7Z7J9 78 aa4.55□□□□□ -1.68
HIPK1-206ENST00000369559 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
HIPK1-206ENST00000369559 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
HIPK1-206ENST00000369559 SEC61BP60468 96 aaKnown RBP4.44□□□□□ -1.7
HIPK1-206ENST00000369559 MUC17Q685J3 4493 aa4.43□□□□□ -1.7
HIPK1-206ENST00000369559 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
HIPK1-206ENST00000369559 TNP1P09430 55 aa4.42□□□□□ -1.7
HIPK1-206ENST00000369559 UBR4Q5T4S7 5183 aa4.4□□□□□ -1.71
HIPK1-206ENST00000369559 KRTAP4-1Q9BYQ7 146 aa4.4□□□□□ -1.71
HIPK1-206ENST00000369559 KRTAP19-2Q3LHN2 52 aa4.36□□□□□ -1.71
HIPK1-206ENST00000369559 RNF213Q63HN8 5207 aa4.33□□□□□ -1.72
HIPK1-206ENST00000369559 MUC2Q02817 5179 aa4.33□□□□□ -1.72
HIPK1-206ENST00000369559 PRO2289Q9P1D8 64 aa4.23□□□□□ -1.73
HIPK1-206ENST00000369559 LCE2DQ5TA82 110 aaPredicted RBP4.23□□□□□ -1.73
HIPK1-206ENST00000369559 FLGP20930 4061 aaPredicted RBP4.21□□□□□ -1.74
HIPK1-206ENST00000369559 FAT4Q6V0I7 4981 aa4.16□□□□□ -1.74
HIPK1-206ENST00000369559 INE1O15225 51 aa4.15□□□□□ -1.75
HIPK1-206ENST00000369559 LCE3AQ5TA76 89 aa4.15□□□□□ -1.75
HIPK1-206ENST00000369559 SPRR2GQ9BYE4 73 aa4.11□□□□□ -1.75
HIPK1-206ENST00000369559 LCE2CQ5TA81 110 aa4.11□□□□□ -1.75
HIPK1-206ENST00000369559 KRTAP19-1Q8IUB9 90 aa4.07□□□□□ -1.76
HIPK1-206ENST00000369559 M0R2T5 61 aa4.05□□□□□ -1.76
HIPK1-206ENST00000369559 MT1HP80294 61 aa4.05□□□□□ -1.76
HIPK1-206ENST00000369559 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
HIPK1-206ENST00000369559 LCE2BO14633 110 aa3.99□□□□□ -1.77
HIPK1-206ENST00000369559 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
HIPK1-206ENST00000369559 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
HIPK1-206ENST00000369559 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
HIPK1-206ENST00000369559 KRTAP10-10P60014 251 aa3.88□□□□□ -1.79
HIPK1-206ENST00000369559 MT1FP04733 61 aa3.88□□□□□ -1.79
HIPK1-206ENST00000369559 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
HIPK1-206ENST00000369559 KRTAP19-8Q3LI54 63 aa3.87□□□□□ -1.79
HIPK1-206ENST00000369559 MT2AP02795 61 aa3.86□□□□□ -1.79
HIPK1-206ENST00000369559 KRTAP9-8Q9BYQ0 159 aa3.86□□□□□ -1.79
HIPK1-206ENST00000369559 MT1XP80297 61 aa3.86□□□□□ -1.79
HIPK1-206ENST00000369559 MT1BP07438 61 aa3.82□□□□□ -1.8
HIPK1-206ENST00000369559 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
HIPK1-206ENST00000369559 KRTAP9-3Q9BYQ3 159 aa3.73□□□□□ -1.81
HIPK1-206ENST00000369559 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
HIPK1-206ENST00000369559 FSIP2Q5CZC0 6907 aa3.72□□□□□ -1.81
HIPK1-206ENST00000369559 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
HIPK1-206ENST00000369559 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
HIPK1-206ENST00000369559 USH2AO75445 5202 aa3.64□□□□□ -1.83
HIPK1-206ENST00000369559 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
HIPK1-206ENST00000369559 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
HIPK1-206ENST00000369559 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
HIPK1-206ENST00000369559 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
HIPK1-206ENST00000369559 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
HIPK1-206ENST00000369559 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
HIPK1-206ENST00000369559 KRTAP4-8A0A0G2JLE6 195 aa3.48□□□□□ -1.85
HIPK1-206ENST00000369559 KRTAP4-8Q9BYQ9 185 aa3.48□□□□□ -1.85
HIPK1-206ENST00000369559 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
HIPK1-206ENST00000369559 KMT2DO14686 5537 aa3.46□□□□□ -1.86
HIPK1-206ENST00000369559 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
HIPK1-206ENST00000369559 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms