RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 C7orf65Q6ZTY9 151 aa10.32□□□□□ -0.76
CHTOP-204ENST00000368694 LRP2P98164 4655 aa10.26□□□□□ -0.77
CHTOP-204ENST00000368694 SPINK7P58062 85 aa10.26□□□□□ -0.77
CHTOP-204ENST00000368694 HERC1Q15751 4861 aa10.23□□□□□ -0.77
CHTOP-204ENST00000368694 ACYP2P14621 99 aa10.2□□□□□ -0.78
CHTOP-204ENST00000368694 RBM12B-AS1Q9P1G2 102 aa10.19□□□□□ -0.78
CHTOP-204ENST00000368694 SEC61BP60468 96 aaKnown RBP10.14□□□□□ -0.79
CHTOP-204ENST00000368694 DMAC1Q96GE9 116 aa10.13□□□□□ -0.79
CHTOP-204ENST00000368694 HMCN2Q8NDA2 5059 aa10.06□□□□□ -0.8
CHTOP-204ENST00000368694 A0A1B0GU69 56 aa10.02□□□□□ -0.81
CHTOP-204ENST00000368694 COX6B2Q6YFQ2 88 aa9.96□□□□□ -0.81
CHTOP-204ENST00000368694 SPATA8Q6RVD6 105 aa9.93□□□□□ -0.82
CHTOP-204ENST00000368694 KRTAP3-1Q9BYR8 98 aa9.92□□□□□ -0.82
CHTOP-204ENST00000368694 MUC17Q685J3 4493 aa9.91□□□□□ -0.82
CHTOP-204ENST00000368694 KRTAP4-1Q9BYQ7 146 aa9.91□□□□□ -0.82
CHTOP-204ENST00000368694 UQCR11O14957 56 aa9.87□□□□□ -0.83
CHTOP-204ENST00000368694 MIR22HGQ0VDD5 57 aa9.87□□□□□ -0.83
CHTOP-204ENST00000368694 PRAC1Q96KF2 57 aa9.83□□□□□ -0.84
CHTOP-204ENST00000368694 ADM2Q7Z4H4 148 aa9.77□□□□□ -0.85
CHTOP-204ENST00000368694 H1FX-AS1Q4G0G2 97 aa9.75□□□□□ -0.85
CHTOP-204ENST00000368694 MUC2Q02817 5179 aa9.74□□□□□ -0.85
CHTOP-204ENST00000368694 S4R3F8 94 aa9.69□□□□□ -0.86
CHTOP-204ENST00000368694 LINC01554Q52M75 96 aa9.65□□□□□ -0.86
CHTOP-204ENST00000368694 UBR4Q5T4S7 5183 aa9.65□□□□□ -0.86
CHTOP-204ENST00000368694 KRTAP19-2Q3LHN2 52 aa9.59□□□□□ -0.87
CHTOP-204ENST00000368694 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
CHTOP-204ENST00000368694 CSAG1Q6PB30 78 aa9.53□□□□□ -0.88
CHTOP-204ENST00000368694 RNF213Q63HN8 5207 aa9.53□□□□□ -0.88
CHTOP-204ENST00000368694 H0YAA0 97 aa9.46□□□□□ -0.9
CHTOP-204ENST00000368694 H3BS24 57 aa9.4□□□□□ -0.9
CHTOP-204ENST00000368694 LCE2CQ5TA81 110 aa9.4□□□□□ -0.91
CHTOP-204ENST00000368694 A0A1B0GU33 70 aa9.39□□□□□ -0.91
CHTOP-204ENST00000368694 FLGP20930 4061 aaPredicted RBP9.36□□□□□ -0.91
CHTOP-204ENST00000368694 FAT4Q6V0I7 4981 aa9.31□□□□□ -0.92
CHTOP-204ENST00000368694 KRTAP25-1Q3LHN0 102 aa9.28□□□□□ -0.92
CHTOP-204ENST00000368694 MT1HP80294 61 aa9.25□□□□□ -0.93
CHTOP-204ENST00000368694 M0R2T5 61 aa9.24□□□□□ -0.93
CHTOP-204ENST00000368694 K7ERS5 55 aa9.21□□□□□ -0.93
CHTOP-204ENST00000368694 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.93
CHTOP-204ENST00000368694 KRTAP10-6P60371 365 aaPredicted RBP9.2□□□□□ -0.94
CHTOP-204ENST00000368694 P0C880 135 aa9.19□□□□□ -0.94
CHTOP-204ENST00000368694 ROMO1P60602 79 aa9.05□□□□□ -0.96
CHTOP-204ENST00000368694 KRTAP13-4Q3LI77 160 aa8.98□□□□□ -0.97
CHTOP-204ENST00000368694 CRIPTQ9P021 101 aa8.98□□□□□ -0.97
CHTOP-204ENST00000368694 LORP23490 312 aaPredicted RBP8.95□□□□□ -0.98
CHTOP-204ENST00000368694 R4GN34 69 aa8.95□□□□□ -0.98
CHTOP-204ENST00000368694 M0QZ58 72 aa8.92□□□□□ -0.98
CHTOP-204ENST00000368694 LCE2AQ5TA79 106 aaPredicted RBP8.89□□□□□ -0.99
CHTOP-204ENST00000368694 KRTAP9-8Q9BYQ0 159 aa8.88□□□□□ -0.99
CHTOP-204ENST00000368694 A0A0D9SG42 100 aa8.87□□□□□ -0.99
CHTOP-204ENST00000368694 MT2AP02795 61 aa8.87□□□□□ -0.99
CHTOP-204ENST00000368694 KRTAP10-10P60014 251 aa8.84□□□□□ -0.99
CHTOP-204ENST00000368694 MT1FP04733 61 aa8.82□□□□□ -1
CHTOP-204ENST00000368694 SPINT4Q6UDR6 99 aa8.69□□□□□ -1.02
CHTOP-204ENST00000368694 KRTAP12-2P59991 146 aa8.65□□□□□ -1.02
CHTOP-204ENST00000368694 SPRR2GQ9BYE4 73 aa8.65□□□□□ -1.02
CHTOP-204ENST00000368694 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.02
CHTOP-204ENST00000368694 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
CHTOP-204ENST00000368694 KRTAP12-1P59990 96 aa8.62□□□□□ -1.03
CHTOP-204ENST00000368694 KRTAP9-3Q9BYQ3 159 aa8.55□□□□□ -1.04
CHTOP-204ENST00000368694 KRTAP15-1Q3LI76 137 aa8.51□□□□□ -1.05
CHTOP-204ENST00000368694 KRTAP19-8Q3LI54 63 aa8.41□□□□□ -1.06
CHTOP-204ENST00000368694 PLAC4Q8WY50 150 aa8.41□□□□□ -1.06
CHTOP-204ENST00000368694 CAMK2N1Q7Z7J9 78 aa8.39□□□□□ -1.07
CHTOP-204ENST00000368694 NDUFAF8A1L188 74 aa8.36□□□□□ -1.07
CHTOP-204ENST00000368694 LCE2BO14633 110 aa8.34□□□□□ -1.07
CHTOP-204ENST00000368694 MT1BP07438 61 aa8.33□□□□□ -1.08
CHTOP-204ENST00000368694 A0A0A0MQY5 61 aa8.12□□□□□ -1.11
CHTOP-204ENST00000368694 USH2AO75445 5202 aa8.09□□□□□ -1.11
CHTOP-204ENST00000368694 LCE2DQ5TA82 110 aaPredicted RBP8.07□□□□□ -1.12
CHTOP-204ENST00000368694 MT1XP80297 61 aa8.06□□□□□ -1.12
CHTOP-204ENST00000368694 KRTAP10-5P60370 271 aa8.04□□□□□ -1.12
CHTOP-204ENST00000368694 PRO2289Q9P1D8 64 aa8.01□□□□□ -1.13
CHTOP-204ENST00000368694 TNP1P09430 55 aa7.94□□□□□ -1.14
CHTOP-204ENST00000368694 PP632Q6XCG6 107 aa7.93□□□□□ -1.14
CHTOP-204ENST00000368694 FSIP2Q5CZC0 6907 aa7.89□□□□□ -1.15
CHTOP-204ENST00000368694 SSPOA2VEC9 5147 aa7.85□□□□□ -1.15
CHTOP-204ENST00000368694 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
CHTOP-204ENST00000368694 KRTAP19-6Q3LI70 58 aa7.82□□□□□ -1.16
CHTOP-204ENST00000368694 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
CHTOP-204ENST00000368694 LUZP6Q538Z0 58 aa7.75□□□□□ -1.17
CHTOP-204ENST00000368694 KRTAP10-12P60413 245 aa7.67□□□□□ -1.18
CHTOP-204ENST00000368694 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
CHTOP-204ENST00000368694 LCE3AQ5TA76 89 aa7.61□□□□□ -1.19
CHTOP-204ENST00000368694 CRCT1Q9UGL9 99 aa7.54□□□□□ -1.2
CHTOP-204ENST00000368694 FCGBPQ9Y6R7 5405 aaPredicted RBP7.53□□□□□ -1.2
CHTOP-204ENST00000368694 KMT2DO14686 5537 aa7.48□□□□□ -1.21
CHTOP-204ENST00000368694 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
CHTOP-204ENST00000368694 KRTAP4-8Q9BYQ9 185 aa7.47□□□□□ -1.21
CHTOP-204ENST00000368694 SPRR5A0A1B0GTR4 108 aa7.45□□□□□ -1.22
CHTOP-204ENST00000368694 KRTAP8-1Q8IUC2 63 aa7.4□□□□□ -1.22
CHTOP-204ENST00000368694 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
CHTOP-204ENST00000368694 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
CHTOP-204ENST00000368694 KRTAP9-6A0A140TA67 174 aa7.22□□□□□ -1.25
CHTOP-204ENST00000368694 MACF1Q9UPN3 7388 aaKnown RBP7.2□□□□□ -1.26
CHTOP-204ENST00000368694 KRTAP19-7Q3SYF9 63 aa7.18□□□□□ -1.26
CHTOP-204ENST00000368694 MT1EP04732 61 aa7.06□□□□□ -1.28
CHTOP-204ENST00000368694 SPRR2FQ96RM1 72 aa7.01□□□□□ -1.29
CHTOP-204ENST00000368694 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.97□□□□□ -1.29
CHTOP-204ENST00000368694 SYNE2Q8WXH0 6885 aaKnown RBP6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms