RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SPCS1Q9Y6A9 102 aa7.1□□□□□ -1.27
CKS1B-202ENST00000368436 TP53AIP1Q9HCN2 124 aa7.07□□□□□ -1.28
CKS1B-202ENST00000368436 KRTAP5-9P26371 169 aa7.05□□□□□ -1.28
CKS1B-202ENST00000368436 PRO0461Q9UI25 63 aa7.04□□□□□ -1.28
CKS1B-202ENST00000368436 KRTAP20-1Q3LI63 56 aa7.01□□□□□ -1.29
CKS1B-202ENST00000368436 CRIPTQ9P021 101 aa7□□□□□ -1.29
CKS1B-202ENST00000368436 CYP4F30PQ9H0H9 118 aa6.98□□□□□ -1.29
CKS1B-202ENST00000368436 A0A087WVE0 104 aa6.95□□□□□ -1.3
CKS1B-202ENST00000368436 LOC105371267A0A1B0GV96 52 aa6.95□□□□□ -1.3
CKS1B-202ENST00000368436 K7EP34 96 aa6.94□□□□□ -1.3
CKS1B-202ENST00000368436 KRTAP4-11Q9BYQ6 195 aa6.93□□□□□ -1.3
CKS1B-202ENST00000368436 IMUPQ9GZP8 106 aa6.92□□□□□ -1.3
CKS1B-202ENST00000368436 KMT2DO14686 5537 aa6.91□□□□□ -1.3
CKS1B-202ENST00000368436 COL5A1-AS1Q5SY13 56 aa6.91□□□□□ -1.3
CKS1B-202ENST00000368436 TRAV22A0A0B4J277 110 aa6.87□□□□□ -1.31
CKS1B-202ENST00000368436 LOC101927531A0A1B0GV80 90 aa6.87□□□□□ -1.31
CKS1B-202ENST00000368436 H0YAA0 97 aa6.86□□□□□ -1.31
CKS1B-202ENST00000368436 MDN1Q9NU22 5596 aa6.85□□□□□ -1.31
CKS1B-202ENST00000368436 LCE4AQ5TA78 99 aa6.83□□□□□ -1.32
CKS1B-202ENST00000368436 F8W1H4 67 aa6.82□□□□□ -1.32
CKS1B-202ENST00000368436 NDUFC1O43677 76 aa6.81□□□□□ -1.32
CKS1B-202ENST00000368436 ETDBQ3ZM63 59 aa6.8□□□□□ -1.32
CKS1B-202ENST00000368436 GTF2H5Q6ZYL4 71 aa6.8□□□□□ -1.32
CKS1B-202ENST00000368436 KRTAP2-3P0C7H8 128 aa6.79□□□□□ -1.32
CKS1B-202ENST00000368436 KRTAP2-4Q9BYR9 128 aa6.79□□□□□ -1.32
CKS1B-202ENST00000368436 UQCRQO14949 82 aa6.75□□□□□ -1.33
CKS1B-202ENST00000368436 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
CKS1B-202ENST00000368436 A8MUN3 132 aa6.74□□□□□ -1.33
CKS1B-202ENST00000368436 MT1XP80297 61 aa6.74□□□□□ -1.33
CKS1B-202ENST00000368436 SPRR2FQ96RM1 72 aa6.74□□□□□ -1.33
CKS1B-202ENST00000368436 PRO2289Q9P1D8 64 aa6.74□□□□□ -1.33
CKS1B-202ENST00000368436 H0Y9P7 68 aa6.73□□□□□ -1.33
CKS1B-202ENST00000368436 ATOX1O00244 68 aa6.73□□□□□ -1.33
CKS1B-202ENST00000368436 ACYP1P07311 99 aa6.72□□□□□ -1.33
CKS1B-202ENST00000368436 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
CKS1B-202ENST00000368436 SPRR2EP22531 72 aa6.7□□□□□ -1.34
CKS1B-202ENST00000368436 SPRR2BP35325 72 aa6.7□□□□□ -1.34
CKS1B-202ENST00000368436 SPRR2AP35326 72 aa6.7□□□□□ -1.34
CKS1B-202ENST00000368436 ATP5EP2Q5VTU8 51 aa6.68□□□□□ -1.34
CKS1B-202ENST00000368436 HIST1H4AP62805 103 aaKnown RBP6.67□□□□□ -1.34
CKS1B-202ENST00000368436 PLAC4Q8WY50 150 aa6.66□□□□□ -1.34
CKS1B-202ENST00000368436 KRTAP8-1Q8IUC2 63 aa6.65□□□□□ -1.34
CKS1B-202ENST00000368436 FAM240AA0A1B0GVK7 77 aa6.64□□□□□ -1.35
CKS1B-202ENST00000368436 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
CKS1B-202ENST00000368436 LCE5AQ5TCM9 118 aa6.62□□□□□ -1.35
CKS1B-202ENST00000368436 KRTAP5-3Q6L8H2 238 aa6.62□□□□□ -1.35
CKS1B-202ENST00000368436 LCE1AQ5T7P2 110 aa6.61□□□□□ -1.35
CKS1B-202ENST00000368436 SVIPQ8NHG7 77 aa6.6□□□□□ -1.35
CKS1B-202ENST00000368436 LINC00208Q96KT6 92 aa6.6□□□□□ -1.35
CKS1B-202ENST00000368436 R4GN34 69 aa6.59□□□□□ -1.35
CKS1B-202ENST00000368436 P0C880 135 aa6.57□□□□□ -1.36
CKS1B-202ENST00000368436 KRTAP2-2Q9BYT5 123 aa6.56□□□□□ -1.36
CKS1B-202ENST00000368436 KRTAP2-1Q9BYU5 128 aa6.56□□□□□ -1.36
CKS1B-202ENST00000368436 C20orf197Q8N268 126 aa6.54□□□□□ -1.36
CKS1B-202ENST00000368436 M0QZ58 72 aa6.52□□□□□ -1.37
CKS1B-202ENST00000368436 MP68P56378 58 aa6.52□□□□□ -1.37
CKS1B-202ENST00000368436 LINC00643Q86TS7 51 aa6.52□□□□□ -1.37
CKS1B-202ENST00000368436 OCR1Q9BZK8 76 aa6.52□□□□□ -1.37
CKS1B-202ENST00000368436 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
CKS1B-202ENST00000368436 PCP4L1A6NKN8 68 aa6.5□□□□□ -1.37
CKS1B-202ENST00000368436 SPRR2DP22532 72 aa6.48□□□□□ -1.37
CKS1B-202ENST00000368436 DMAC1Q96GE9 116 aa6.45□□□□□ -1.38
CKS1B-202ENST00000368436 H3BPC8 53 aa6.42□□□□□ -1.38
CKS1B-202ENST00000368436 KRTAP10-7P60409 375 aaPredicted RBP6.42□□□□□ -1.38
CKS1B-202ENST00000368436 LINC01554Q52M75 96 aa6.42□□□□□ -1.38
CKS1B-202ENST00000368436 KRTAP10-12P60413 245 aa6.41□□□□□ -1.38
CKS1B-202ENST00000368436 TRAV7A0A075B6U4 112 aa6.31□□□□□ -1.4
CKS1B-202ENST00000368436 MT-ATP8P03928 68 aa6.25□□□□□ -1.41
CKS1B-202ENST00000368436 SCGB1A1P11684 91 aa6.24□□□□□ -1.41
CKS1B-202ENST00000368436 ACYP2P14621 99 aa6.24□□□□□ -1.41
CKS1B-202ENST00000368436 SPTSSBQ8NFR3 76 aa6.2□□□□□ -1.42
CKS1B-202ENST00000368436 A0A1B0GV90 55 aa6.15□□□□□ -1.42
CKS1B-202ENST00000368436 J3QR89 54 aa6.13□□□□□ -1.43
CKS1B-202ENST00000368436 DSTQ03001 7570 aaKnown RBP6.09□□□□□ -1.43
CKS1B-202ENST00000368436 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
CKS1B-202ENST00000368436 KRTAP13-4Q3LI77 160 aa6.05□□□□□ -1.44
CKS1B-202ENST00000368436 KRTAP19-7Q3SYF9 63 aa6.04□□□□□ -1.44
CKS1B-202ENST00000368436 GPR98Q8WXG9 6306 aa6.03□□□□□ -1.44
CKS1B-202ENST00000368436 SMIM20Q8N5G0 67 aa6.03□□□□□ -1.44
CKS1B-202ENST00000368436 CAMK2N1Q7Z7J9 78 aa6.01□□□□□ -1.45
CKS1B-202ENST00000368436 MT1EP04732 61 aa5.99□□□□□ -1.45
CKS1B-202ENST00000368436 KRTAP19-3Q7Z4W3 81 aa5.98□□□□□ -1.45
CKS1B-202ENST00000368436 SNURFQ9Y675 71 aa5.94□□□□□ -1.46
CKS1B-202ENST00000368436 SPANXA2-OT1Q8N9U9 137 aa5.93□□□□□ -1.46
CKS1B-202ENST00000368436 PCP4P48539 62 aa5.87□□□□□ -1.47
CKS1B-202ENST00000368436 CYSTM1Q9H1C7 97 aa5.84□□□□□ -1.47
CKS1B-202ENST00000368436 MT1GP13640 62 aa5.83□□□□□ -1.48
CKS1B-202ENST00000368436 A0A0D9SG42 100 aa5.82□□□□□ -1.48
CKS1B-202ENST00000368436 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
CKS1B-202ENST00000368436 KRTAP19-5Q3LI72 72 aa5.8□□□□□ -1.48
CKS1B-202ENST00000368436 K7ERU9 68 aa5.78□□□□□ -1.48
CKS1B-202ENST00000368436 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
CKS1B-202ENST00000368436 COA5Q86WW8 74 aa5.76□□□□□ -1.49
CKS1B-202ENST00000368436 SPATA8Q6RVD6 105 aa5.75□□□□□ -1.49
CKS1B-202ENST00000368436 SERP2Q8N6R1 65 aa5.75□□□□□ -1.49
CKS1B-202ENST00000368436 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
CKS1B-202ENST00000368436 SEC61GP60059 68 aa5.74□□□□□ -1.49
CKS1B-202ENST00000368436 SPINT4Q6UDR6 99 aa5.74□□□□□ -1.49
CKS1B-202ENST00000368436 MT1MQ8N339 61 aa5.72□□□□□ -1.49
CKS1B-202ENST00000368436 KRTAP12-1P59990 96 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms