RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 H3BPC8 53 aa10.28□□□□□ -0.76
ECHDC1-203ENST00000368291 KRTAP19-1Q8IUB9 90 aa10.28□□□□□ -0.76
ECHDC1-203ENST00000368291 FAM236AA0A1B0GUQ0 79 aa10.26□□□□□ -0.77
ECHDC1-203ENST00000368291 FAM236BA0A1B0GV22 79 aa10.26□□□□□ -0.77
ECHDC1-203ENST00000368291 A8MUN3 132 aa10.26□□□□□ -0.77
ECHDC1-203ENST00000368291 FCGBPQ9Y6R7 5405 aaPredicted RBP10.18□□□□□ -0.78
ECHDC1-203ENST00000368291 NDUFC1O43677 76 aa10.16□□□□□ -0.78
ECHDC1-203ENST00000368291 KRTAP19-6Q3LI70 58 aa10.16□□□□□ -0.78
ECHDC1-203ENST00000368291 TRAV7A0A075B6U4 112 aa10.13□□□□□ -0.79
ECHDC1-203ENST00000368291 SPRR2GQ9BYE4 73 aa10.12□□□□□ -0.79
ECHDC1-203ENST00000368291 SMIM20Q8N5G0 67 aa10.11□□□□□ -0.79
ECHDC1-203ENST00000368291 DMAC1Q96GE9 116 aa10.09□□□□□ -0.79
ECHDC1-203ENST00000368291 H0YAA0 97 aa10.06□□□□□ -0.8
ECHDC1-203ENST00000368291 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.05□□□□□ -0.8
ECHDC1-203ENST00000368291 MT1BP07438 61 aa10.02□□□□□ -0.8
ECHDC1-203ENST00000368291 KRTAP19-8Q3LI54 63 aa10.02□□□□□ -0.8
ECHDC1-203ENST00000368291 CRIPTQ9P021 101 aa9.98□□□□□ -0.81
ECHDC1-203ENST00000368291 Q5VV11 94 aa9.94□□□□□ -0.82
ECHDC1-203ENST00000368291 ADM2Q7Z4H4 148 aa9.94□□□□□ -0.82
ECHDC1-203ENST00000368291 SNURFQ9Y675 71 aa9.91□□□□□ -0.82
ECHDC1-203ENST00000368291 SERP2Q8N6R1 65 aa9.88□□□□□ -0.83
ECHDC1-203ENST00000368291 KRTAP9-7A8MTY7 169 aa9.85□□□□□ -0.83
ECHDC1-203ENST00000368291 ACYP2P14621 99 aa9.85□□□□□ -0.83
ECHDC1-203ENST00000368291 C20orf197Q8N268 126 aa9.82□□□□□ -0.84
ECHDC1-203ENST00000368291 MACF1Q9UPN3 7388 aaKnown RBP9.82□□□□□ -0.84
ECHDC1-203ENST00000368291 P0C880 135 aa9.79□□□□□ -0.84
ECHDC1-203ENST00000368291 SPANXA2-OT1Q8N9U9 137 aa9.74□□□□□ -0.85
ECHDC1-203ENST00000368291 A6NN06 94 aa9.73□□□□□ -0.85
ECHDC1-203ENST00000368291 KRTAP10-5P60370 271 aa9.71□□□□□ -0.86
ECHDC1-203ENST00000368291 SYNE2Q8WXH0 6885 aaKnown RBP9.67□□□□□ -0.86
ECHDC1-203ENST00000368291 R4GN34 69 aa9.64□□□□□ -0.87
ECHDC1-203ENST00000368291 CHKB-CPT1BH3BT56 60 aa9.63□□□□□ -0.87
ECHDC1-203ENST00000368291 COX7CP15954 63 aa9.63□□□□□ -0.87
ECHDC1-203ENST00000368291 SPTSSBQ8NFR3 76 aa9.63□□□□□ -0.87
ECHDC1-203ENST00000368291 M0QZ58 72 aa9.6□□□□□ -0.87
ECHDC1-203ENST00000368291 CYSTM1Q9H1C7 97 aa9.52□□□□□ -0.88
ECHDC1-203ENST00000368291 H7BZZ5 65 aa9.48□□□□□ -0.89
ECHDC1-203ENST00000368291 KRTAP6-3Q3LI67 103 aa9.48□□□□□ -0.89
ECHDC1-203ENST00000368291 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
ECHDC1-203ENST00000368291 COA5Q86WW8 74 aa9.46□□□□□ -0.9
ECHDC1-203ENST00000368291 MT1XP80297 61 aa9.44□□□□□ -0.9
ECHDC1-203ENST00000368291 LINC01554Q52M75 96 aa9.43□□□□□ -0.9
ECHDC1-203ENST00000368291 ANAPC13Q9BS18 74 aa9.38□□□□□ -0.91
ECHDC1-203ENST00000368291 PRO2289Q9P1D8 64 aa9.36□□□□□ -0.91
ECHDC1-203ENST00000368291 KRTAP13-4Q3LI77 160 aa9.27□□□□□ -0.93
ECHDC1-203ENST00000368291 CCDC179H3BU77 68 aa9.24□□□□□ -0.93
ECHDC1-203ENST00000368291 KRTAP5-9P26371 169 aa9.17□□□□□ -0.94
ECHDC1-203ENST00000368291 PCP4P48539 62 aa9.17□□□□□ -0.94
ECHDC1-203ENST00000368291 KMT2DO14686 5537 aa9.14□□□□□ -0.95
ECHDC1-203ENST00000368291 KRTAP12-2P59991 146 aa9.14□□□□□ -0.95
ECHDC1-203ENST00000368291 SEC61GP60059 68 aa9.12□□□□□ -0.95
ECHDC1-203ENST00000368291 SERP1Q9Y6X1 66 aa9.12□□□□□ -0.95
ECHDC1-203ENST00000368291 MUC12Q9UKN1 5478 aa9.1□□□□□ -0.95
ECHDC1-203ENST00000368291 NEBP20929 6669 aa9.06□□□□□ -0.96
ECHDC1-203ENST00000368291 KRTAP10-7P60409 375 aaPredicted RBP9.02□□□□□ -0.97
ECHDC1-203ENST00000368291 A0A1B0GU33 70 aa9□□□□□ -0.97
ECHDC1-203ENST00000368291 SPATA8Q6RVD6 105 aa9□□□□□ -0.97
ECHDC1-203ENST00000368291 ATP5EP56381 51 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-203ENST00000368291 KRTAP4-8A0A0G2JLE6 195 aa8.97□□□□□ -0.97
ECHDC1-203ENST00000368291 KRTAP4-8Q9BYQ9 185 aa8.97□□□□□ -0.97
ECHDC1-203ENST00000368291 KRTAP10-12P60413 245 aa8.96□□□□□ -0.98
ECHDC1-203ENST00000368291 KRTAP8-1Q8IUC2 63 aa8.95□□□□□ -0.98
ECHDC1-203ENST00000368291 A0A0D9SG42 100 aa8.93□□□□□ -0.98
ECHDC1-203ENST00000368291 A0A1B0GU69 56 aa8.93□□□□□ -0.98
ECHDC1-203ENST00000368291 SPRR2FQ96RM1 72 aa8.91□□□□□ -0.98
ECHDC1-203ENST00000368291 CAMK2N1Q7Z7J9 78 aa8.88□□□□□ -0.99
ECHDC1-203ENST00000368291 TMEM258P61165 79 aa8.86□□□□□ -0.99
ECHDC1-203ENST00000368291 MDN1Q9NU22 5596 aa8.86□□□□□ -0.99
ECHDC1-203ENST00000368291 KRTAP12-1P59990 96 aa8.82□□□□□ -1
ECHDC1-203ENST00000368291 SPINT4Q6UDR6 99 aa8.78□□□□□ -1
ECHDC1-203ENST00000368291 LINC01558Q9Y6Z2 57 aa8.75□□□□□ -1.01
ECHDC1-203ENST00000368291 SPRR2EP22531 72 aa8.73□□□□□ -1.01
ECHDC1-203ENST00000368291 SPRR2BP35325 72 aa8.73□□□□□ -1.01
ECHDC1-203ENST00000368291 SPRR2AP35326 72 aa8.73□□□□□ -1.01
ECHDC1-203ENST00000368291 SMIM26A0A096LP01 95 aa8.72□□□□□ -1.01
ECHDC1-203ENST00000368291 A8MU10 97 aa8.72□□□□□ -1.01
ECHDC1-203ENST00000368291 PRR15LQ9BU68 103 aa8.69□□□□□ -1.02
ECHDC1-203ENST00000368291 LCE1AQ5T7P2 110 aa8.68□□□□□ -1.02
ECHDC1-203ENST00000368291 KRTAP20-1Q3LI63 56 aa8.63□□□□□ -1.03
ECHDC1-203ENST00000368291 KRTAP2-3P0C7H8 128 aa8.48□□□□□ -1.05
ECHDC1-203ENST00000368291 KRTAP2-4Q9BYR9 128 aa8.48□□□□□ -1.05
ECHDC1-203ENST00000368291 UQCR11O14957 56 aa8.45□□□□□ -1.06
ECHDC1-203ENST00000368291 KRTAP19-7Q3SYF9 63 aa8.45□□□□□ -1.06
ECHDC1-203ENST00000368291 SPRR2DP22532 72 aa8.42□□□□□ -1.06
ECHDC1-203ENST00000368291 C10orf95Q9H7T3 257 aa8.42□□□□□ -1.06
ECHDC1-203ENST00000368291 MT1EP04732 61 aa8.34□□□□□ -1.07
ECHDC1-203ENST00000368291 Q1T7F1 81 aa8.32□□□□□ -1.08
ECHDC1-203ENST00000368291 V9GYY9 64 aa8.31□□□□□ -1.08
ECHDC1-203ENST00000368291 MIR22HGQ0VDD5 57 aa8.29□□□□□ -1.08
ECHDC1-203ENST00000368291 PSPHP1O15172 72 aa8.28□□□□□ -1.08
ECHDC1-203ENST00000368291 TNP1P09430 55 aa8.27□□□□□ -1.09
ECHDC1-203ENST00000368291 RPS28P62857 69 aaKnown RBP8.27□□□□□ -1.09
ECHDC1-203ENST00000368291 KRTAP19-5Q3LI72 72 aa8.27□□□□□ -1.09
ECHDC1-203ENST00000368291 KRTAP2-2Q9BYT5 123 aa8.22□□□□□ -1.09
ECHDC1-203ENST00000368291 KRTAP2-1Q9BYU5 128 aa8.22□□□□□ -1.09
ECHDC1-203ENST00000368291 LCE5AQ5TCM9 118 aa8.22□□□□□ -1.09
ECHDC1-203ENST00000368291 LCE3AQ5TA76 89 aa8.21□□□□□ -1.1
ECHDC1-203ENST00000368291 KRTAP19-3Q7Z4W3 81 aa8.21□□□□□ -1.1
ECHDC1-203ENST00000368291 LCE3BQ5TA77 95 aa8.19□□□□□ -1.1
ECHDC1-203ENST00000368291 MT1GP13640 62 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms