RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 SMIM26A0A096LP01 95 aa9.99□□□□□ -0.81
CD55-203ENST00000367063 COA5Q86WW8 74 aa9.93□□□□□ -0.82
CD55-203ENST00000367063 DMAC1Q96GE9 116 aa9.92□□□□□ -0.82
CD55-203ENST00000367063 ACYP2P14621 99 aa9.88□□□□□ -0.83
CD55-203ENST00000367063 A8MUN3 132 aa9.87□□□□□ -0.83
CD55-203ENST00000367063 S4R3F8 94 aa9.85□□□□□ -0.83
CD55-203ENST00000367063 KRTAP10-6P60371 365 aaPredicted RBP9.8□□□□□ -0.84
CD55-203ENST00000367063 LCA10Q71F78 164 aa9.79□□□□□ -0.84
CD55-203ENST00000367063 Q1T7F1 81 aa9.77□□□□□ -0.84
CD55-203ENST00000367063 LORP23490 312 aaPredicted RBP9.76□□□□□ -0.85
CD55-203ENST00000367063 CHKB-CPT1BH3BT56 60 aa9.7□□□□□ -0.86
CD55-203ENST00000367063 V9GYY9 64 aa9.7□□□□□ -0.86
CD55-203ENST00000367063 KRTAP3-3Q9BYR6 98 aa9.69□□□□□ -0.86
CD55-203ENST00000367063 CSAG1Q6PB30 78 aa9.68□□□□□ -0.86
CD55-203ENST00000367063 KRTAP9-8Q9BYQ0 159 aa9.64□□□□□ -0.87
CD55-203ENST00000367063 LINC01558Q9Y6Z2 57 aa9.6□□□□□ -0.87
CD55-203ENST00000367063 PSPHP1O15172 72 aa9.57□□□□□ -0.88
CD55-203ENST00000367063 MT2AP02795 61 aa9.57□□□□□ -0.88
CD55-203ENST00000367063 PRR15LQ9BU68 103 aa9.53□□□□□ -0.88
CD55-203ENST00000367063 MT1FP04733 61 aa9.51□□□□□ -0.89
CD55-203ENST00000367063 Q5VV11 94 aa9.51□□□□□ -0.89
CD55-203ENST00000367063 KRTAP10-10P60014 251 aa9.49□□□□□ -0.89
CD55-203ENST00000367063 SPTSSBQ8NFR3 76 aa9.47□□□□□ -0.89
CD55-203ENST00000367063 H0YAA0 97 aa9.39□□□□□ -0.91
CD55-203ENST00000367063 A0A1B0GU69 56 aa9.37□□□□□ -0.91
CD55-203ENST00000367063 ADM2Q7Z4H4 148 aa9.35□□□□□ -0.91
CD55-203ENST00000367063 LCE2DQ5TA82 110 aaPredicted RBP9.34□□□□□ -0.91
CD55-203ENST00000367063 KRTAP9-3Q9BYQ3 159 aa9.31□□□□□ -0.92
CD55-203ENST00000367063 BRK1Q8WUW1 75 aa9.29□□□□□ -0.92
CD55-203ENST00000367063 KRTAP9-2Q9BYQ4 174 aa9.28□□□□□ -0.92
CD55-203ENST00000367063 A6NED7 52 aa9.26□□□□□ -0.93
CD55-203ENST00000367063 SEC61GP60059 68 aa9.26□□□□□ -0.93
CD55-203ENST00000367063 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.93
CD55-203ENST00000367063 P0C880 135 aa9.2□□□□□ -0.94
CD55-203ENST00000367063 PRO0628Q9UI54 55 aa9.2□□□□□ -0.94
CD55-203ENST00000367063 CRIPTQ9P021 101 aa9.18□□□□□ -0.94
CD55-203ENST00000367063 CDC42SE1Q9NRR8 79 aa9.15□□□□□ -0.94
CD55-203ENST00000367063 A8MU10 97 aa9.14□□□□□ -0.95
CD55-203ENST00000367063 LCE2BO14633 110 aa9.14□□□□□ -0.95
CD55-203ENST00000367063 KRTAP19-1Q8IUB9 90 aa9.13□□□□□ -0.95
CD55-203ENST00000367063 UQCR11O14957 56 aa9.13□□□□□ -0.95
CD55-203ENST00000367063 FSIP2Q5CZC0 6907 aa9.11□□□□□ -0.95
CD55-203ENST00000367063 SPRR2GQ9BYE4 73 aa9.1□□□□□ -0.95
CD55-203ENST00000367063 SPATA8Q6RVD6 105 aa9.07□□□□□ -0.96
CD55-203ENST00000367063 R4GN34 69 aa9.07□□□□□ -0.96
CD55-203ENST00000367063 A0A1B0GU33 70 aa9.05□□□□□ -0.96
CD55-203ENST00000367063 MIR22HGQ0VDD5 57 aa9.04□□□□□ -0.96
CD55-203ENST00000367063 USH2AO75445 5202 aa9.04□□□□□ -0.96
CD55-203ENST00000367063 M0QZ58 72 aa9.02□□□□□ -0.97
CD55-203ENST00000367063 KRTAP19-8Q3LI54 63 aa8.94□□□□□ -0.98
CD55-203ENST00000367063 LINC01554Q52M75 96 aa8.88□□□□□ -0.99
CD55-203ENST00000367063 MT1BP07438 61 aa8.87□□□□□ -0.99
CD55-203ENST00000367063 CRCT1Q9UGL9 99 aa8.87□□□□□ -0.99
CD55-203ENST00000367063 SSPOA2VEC9 5147 aa8.84□□□□□ -0.99
CD55-203ENST00000367063 KRTAP13-4Q3LI77 160 aa8.84□□□□□ -0.99
CD55-203ENST00000367063 SVIPQ8NHG7 77 aa8.82□□□□□ -1
CD55-203ENST00000367063 PMAIP1Q13794 54 aa8.8□□□□□ -1
CD55-203ENST00000367063 KRTAP9-6A0A140TA67 174 aa8.76□□□□□ -1.01
CD55-203ENST00000367063 A6NN06 94 aa8.75□□□□□ -1.01
CD55-203ENST00000367063 PLAC4Q8WY50 150 aa8.73□□□□□ -1.01
CD55-203ENST00000367063 KRTAP19-6Q3LI70 58 aa8.71□□□□□ -1.02
CD55-203ENST00000367063 A0A0D9SG42 100 aa8.66□□□□□ -1.02
CD55-203ENST00000367063 K7ERS5 55 aa8.57□□□□□ -1.04
CD55-203ENST00000367063 FCGBPQ9Y6R7 5405 aaPredicted RBP8.55□□□□□ -1.04
CD55-203ENST00000367063 KRTAP10-5P60370 271 aa8.53□□□□□ -1.04
CD55-203ENST00000367063 SPINT4Q6UDR6 99 aa8.5□□□□□ -1.05
CD55-203ENST00000367063 KRTAP12-1P59990 96 aa8.49□□□□□ -1.05
CD55-203ENST00000367063 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
CD55-203ENST00000367063 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
CD55-203ENST00000367063 PRO2289Q9P1D8 64 aa8.48□□□□□ -1.05
CD55-203ENST00000367063 MT1XP80297 61 aa8.46□□□□□ -1.05
CD55-203ENST00000367063 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
CD55-203ENST00000367063 ROMO1P60602 79 aa8.27□□□□□ -1.08
CD55-203ENST00000367063 MACF1Q9UPN3 7388 aaKnown RBP8.26□□□□□ -1.09
CD55-203ENST00000367063 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.23□□□□□ -1.09
CD55-203ENST00000367063 PRAC1Q96KF2 57 aa8.23□□□□□ -1.09
CD55-203ENST00000367063 SYNE2Q8WXH0 6885 aaKnown RBP8.12□□□□□ -1.11
CD55-203ENST00000367063 KRTAP10-7P60409 375 aaPredicted RBP8.11□□□□□ -1.11
CD55-203ENST00000367063 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
CD55-203ENST00000367063 KRTAP10-12P60413 245 aa8.04□□□□□ -1.12
CD55-203ENST00000367063 KMT2DO14686 5537 aa8.01□□□□□ -1.13
CD55-203ENST00000367063 KRTAP25-1Q3LHN0 102 aa8.01□□□□□ -1.13
CD55-203ENST00000367063 KRTAP9-7A8MTY7 169 aa7.95□□□□□ -1.14
CD55-203ENST00000367063 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
CD55-203ENST00000367063 KRTAP4-8Q9BYQ9 185 aa7.93□□□□□ -1.14
CD55-203ENST00000367063 TNP1P09430 55 aa7.92□□□□□ -1.14
CD55-203ENST00000367063 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
CD55-203ENST00000367063 KRTAP6-3Q3LI67 103 aa7.87□□□□□ -1.15
CD55-203ENST00000367063 KRTAP5-9P26371 169 aa7.76□□□□□ -1.17
CD55-203ENST00000367063 SPRR2FQ96RM1 72 aa7.71□□□□□ -1.18
CD55-203ENST00000367063 LCE3AQ5TA76 89 aa7.67□□□□□ -1.18
CD55-203ENST00000367063 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
CD55-203ENST00000367063 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
CD55-203ENST00000367063 KRTAP23-1A1A580 65 aa7.57□□□□□ -1.2
CD55-203ENST00000367063 KRTAP19-7Q3SYF9 63 aa7.56□□□□□ -1.2
CD55-203ENST00000367063 KRTAP19-5Q3LI72 72 aa7.54□□□□□ -1.2
CD55-203ENST00000367063 MDN1Q9NU22 5596 aa7.52□□□□□ -1.21
CD55-203ENST00000367063 NEBP20929 6669 aa7.47□□□□□ -1.21
CD55-203ENST00000367063 MT1EP04732 61 aa7.46□□□□□ -1.22
CD55-203ENST00000367063 SPRR2EP22531 72 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms