RNA–Protein interactions for RNA: ENST00000366871.7

T-202, Transcript of Brachyury protein, humanhuman

TSL 1 (best) BASIC

Gene T, Length 2,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-202ENST00000366871 LINC01554Q52M75 96 aa10.6□□□□□ -0.71
T-202ENST00000366871 PRAC1Q96KF2 57 aa10.6□□□□□ -0.71
T-202ENST00000366871 MT1HL1P0DM35 61 aa10.58□□□□□ -0.72
T-202ENST00000366871 DMBT1Q9UGM3 2413 aaPredicted RBP10.54□□□□□ -0.72
T-202ENST00000366871 KRTAP3-3Q9BYR6 98 aa10.53□□□□□ -0.72
T-202ENST00000366871 KRTAP17-1Q9BYP8 105 aa10.51□□□□□ -0.73
T-202ENST00000366871 ADM2Q7Z4H4 148 aa10.5□□□□□ -0.73
T-202ENST00000366871 RYR3Q15413 4870 aa10.49□□□□□ -0.73
T-202ENST00000366871 S4R3F8 94 aa10.47□□□□□ -0.73
T-202ENST00000366871 TPRXLQ17RH7 258 aa10.44□□□□□ -0.74
T-202ENST00000366871 K7ERS5 55 aa10.42□□□□□ -0.74
T-202ENST00000366871 KRTAP10-6P60371 365 aaPredicted RBP10.41□□□□□ -0.74
T-202ENST00000366871 KIAA1109Q2LD37 5005 aa10.35□□□□□ -0.75
T-202ENST00000366871 KRTAP3-2Q9BYR7 98 aa10.35□□□□□ -0.75
T-202ENST00000366871 MYCBP2O75592 4640 aa10.32□□□□□ -0.76
T-202ENST00000366871 CSAG1Q6PB30 78 aa10.31□□□□□ -0.76
T-202ENST00000366871 KRTAP13-4Q3LI77 160 aa10.19□□□□□ -0.78
T-202ENST00000366871 P0C880 135 aa10.15□□□□□ -0.78
T-202ENST00000366871 KRTAP25-1Q3LHN0 102 aa10.14□□□□□ -0.79
T-202ENST00000366871 ROMO1P60602 79 aa10.1□□□□□ -0.79
T-202ENST00000366871 EPPK1P58107 5090 aaKnown RBP10.09□□□□□ -0.79
T-202ENST00000366871 LRP2P98164 4655 aa10.07□□□□□ -0.8
T-202ENST00000366871 A0A0D9SG42 100 aa10.06□□□□□ -0.8
T-202ENST00000366871 SEC61BP60468 96 aaKnown RBP10.05□□□□□ -0.8
T-202ENST00000366871 M0QZ58 72 aa10.04□□□□□ -0.8
T-202ENST00000366871 KRTAP4-5Q9BYR2 181 aa10.02□□□□□ -0.81
T-202ENST00000366871 LPAP08519 4548 aa10□□□□□ -0.81
T-202ENST00000366871 ABCA13Q86UQ4 5058 aa9.9□□□□□ -0.82
T-202ENST00000366871 KRTAP12-2P59991 146 aa9.88□□□□□ -0.83
T-202ENST00000366871 KRTAP12-1P59990 96 aa9.87□□□□□ -0.83
T-202ENST00000366871 J3QL48 77 aa9.86□□□□□ -0.83
T-202ENST00000366871 SPINT4Q6UDR6 99 aa9.79□□□□□ -0.84
T-202ENST00000366871 CRIPTQ9P021 101 aa9.79□□□□□ -0.84
T-202ENST00000366871 MUC17Q685J3 4493 aa9.74□□□□□ -0.85
T-202ENST00000366871 KRTAP4-1Q9BYQ7 146 aa9.71□□□□□ -0.85
T-202ENST00000366871 R4GN34 69 aa9.71□□□□□ -0.86
T-202ENST00000366871 KRTAP19-2Q3LHN2 52 aa9.65□□□□□ -0.87
T-202ENST00000366871 HERC2O95714 4834 aa9.63□□□□□ -0.87
T-202ENST00000366871 C10orf95Q9H7T3 257 aa9.53□□□□□ -0.88
T-202ENST00000366871 LORP23490 312 aaPredicted RBP9.47□□□□□ -0.89
T-202ENST00000366871 BIRC6Q9NR09 4857 aa9.46□□□□□ -0.9
T-202ENST00000366871 FLGP20930 4061 aaPredicted RBP9.32□□□□□ -0.92
T-202ENST00000366871 NDUFAF8A1L188 74 aa9.22□□□□□ -0.93
T-202ENST00000366871 KRTAP15-1Q3LI76 137 aa9.2□□□□□ -0.94
T-202ENST00000366871 CAMK2N1Q7Z7J9 78 aa9.17□□□□□ -0.94
T-202ENST00000366871 HMCN2Q8NDA2 5059 aa9.14□□□□□ -0.95
T-202ENST00000366871 HERC1Q15751 4861 aa9.13□□□□□ -0.95
T-202ENST00000366871 MUC2Q02817 5179 aa9.13□□□□□ -0.95
T-202ENST00000366871 PP632Q6XCG6 107 aa9.12□□□□□ -0.95
T-202ENST00000366871 A0A0A0MQY5 61 aa9.09□□□□□ -0.95
T-202ENST00000366871 LCE2CQ5TA81 110 aa9.08□□□□□ -0.96
T-202ENST00000366871 PCLOQ9Y6V0 5065 aa9.02□□□□□ -0.97
T-202ENST00000366871 SPRR2GQ9BYE4 73 aa8.95□□□□□ -0.98
T-202ENST00000366871 KRTAP23-1A1A580 65 aa8.94□□□□□ -0.98
T-202ENST00000366871 PLAC4Q8WY50 150 aa8.9□□□□□ -0.98
T-202ENST00000366871 TNP1P09430 55 aa8.89□□□□□ -0.99
T-202ENST00000366871 MT1HP80294 61 aa8.84□□□□□ -0.99
T-202ENST00000366871 M0R2T5 61 aa8.82□□□□□ -1
T-202ENST00000366871 KRTAP19-1Q8IUB9 90 aa8.82□□□□□ -1
T-202ENST00000366871 FAT4Q6V0I7 4981 aa8.71□□□□□ -1.01
T-202ENST00000366871 LUZP6Q538Z0 58 aa8.7□□□□□ -1.02
T-202ENST00000366871 RNF213Q63HN8 5207 aa8.68□□□□□ -1.02
T-202ENST00000366871 MT2AP02795 61 aa8.68□□□□□ -1.02
T-202ENST00000366871 KRTAP9-8Q9BYQ0 159 aa8.65□□□□□ -1.03
T-202ENST00000366871 MT1FP04733 61 aa8.64□□□□□ -1.03
T-202ENST00000366871 KRTAP10-10P60014 251 aa8.64□□□□□ -1.03
T-202ENST00000366871 KRTAP19-8Q3LI54 63 aa8.58□□□□□ -1.04
T-202ENST00000366871 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
T-202ENST00000366871 SPRR5A0A1B0GTR4 108 aa8.4□□□□□ -1.07
T-202ENST00000366871 MT1BP07438 61 aa8.37□□□□□ -1.07
T-202ENST00000366871 LCE3AQ5TA76 89 aa8.32□□□□□ -1.08
T-202ENST00000366871 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
T-202ENST00000366871 KRTAP10-5P60370 271 aa8.29□□□□□ -1.08
T-202ENST00000366871 MT1XP80297 61 aa8.28□□□□□ -1.08
T-202ENST00000366871 KRTAP8-1Q8IUC2 63 aa8.26□□□□□ -1.09
T-202ENST00000366871 PRO2289Q9P1D8 64 aa8.14□□□□□ -1.11
T-202ENST00000366871 KRTAP10-12P60413 245 aa8.11□□□□□ -1.11
T-202ENST00000366871 KRTAP12-3P60328 96 aa8□□□□□ -1.13
T-202ENST00000366871 KRTAP10-7P60409 375 aaPredicted RBP7.97□□□□□ -1.13
T-202ENST00000366871 LCE2AQ5TA79 106 aaPredicted RBP7.94□□□□□ -1.14
T-202ENST00000366871 LCE2BO14633 110 aa7.91□□□□□ -1.14
T-202ENST00000366871 KRTAP19-5Q3LI72 72 aa7.65□□□□□ -1.18
T-202ENST00000366871 LCE3CQ5T5A8 94 aa7.54□□□□□ -1.2
T-202ENST00000366871 KRTAP19-4Q3LI73 84 aa7.5□□□□□ -1.21
T-202ENST00000366871 USH2AO75445 5202 aa7.48□□□□□ -1.21
T-202ENST00000366871 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
T-202ENST00000366871 INE1O15225 51 aa7.45□□□□□ -1.22
T-202ENST00000366871 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
T-202ENST00000366871 KRTAP19-7Q3SYF9 63 aa7.39□□□□□ -1.23
T-202ENST00000366871 KMT2DO14686 5537 aa7.28□□□□□ -1.24
T-202ENST00000366871 KRTAP19-6Q3LI70 58 aa7.27□□□□□ -1.25
T-202ENST00000366871 SSPOA2VEC9 5147 aa7.22□□□□□ -1.25
T-202ENST00000366871 MT1EP04732 61 aa7.2□□□□□ -1.26
T-202ENST00000366871 MT1LQ93083 61 aa7.17□□□□□ -1.26
T-202ENST00000366871 KRTAP9-6A8MVA2 160 aa7.14□□□□□ -1.27
T-202ENST00000366871 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
T-202ENST00000366871 KRTAP2-3P0C7H8 128 aa6.99□□□□□ -1.29
T-202ENST00000366871 KRTAP2-4Q9BYR9 128 aa6.99□□□□□ -1.29
T-202ENST00000366871 KRTAP2-1Q9BYU5 128 aa6.99□□□□□ -1.29
T-202ENST00000366871 FSIP2Q5CZC0 6907 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms