RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 CSMD2Q7Z408 3487 aa3.5□□□□□ -1.85
NCKAP1-202ENST00000361354 ZNF469Q96JG9 3925 aaPredicted RBP3.47□□□□□ -1.85
NCKAP1-202ENST00000361354 CMYA5Q8N3K9 4069 aa3.44□□□□□ -1.86
NCKAP1-202ENST00000361354 DNAH7Q8WXX0 4024 aa3.41□□□□□ -1.86
NCKAP1-202ENST00000361354 ANK2Q01484 3957 aa3.39□□□□□ -1.87
NCKAP1-202ENST00000361354 HECTD4Q9Y4D8 3996 aa3.38□□□□□ -1.87
NCKAP1-202ENST00000361354 MT1HL1P0DM35 61 aa3.35□□□□□ -1.87
NCKAP1-202ENST00000361354 DNAH2Q9P225 4427 aa3.34□□□□□ -1.87
NCKAP1-202ENST00000361354 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
NCKAP1-202ENST00000361354 KMT2AQ03164 3969 aa3.31□□□□□ -1.88
NCKAP1-202ENST00000361354 DNAH1Q9P2D7 4330 aa3.27□□□□□ -1.89
NCKAP1-202ENST00000361354 VPS13BQ7Z7G8 4022 aa3.26□□□□□ -1.89
NCKAP1-202ENST00000361354 LORP23490 312 aaPredicted RBP3.26□□□□□ -1.89
NCKAP1-202ENST00000361354 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
NCKAP1-202ENST00000361354 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
NCKAP1-202ENST00000361354 HUWE1Q7Z6Z7 4374 aaKnown RBP3.24□□□□□ -1.89
NCKAP1-202ENST00000361354 DNAH6Q9C0G6 4158 aa3.22□□□□□ -1.89
NCKAP1-202ENST00000361354 KRTAP10-4P60372 401 aaPredicted RBP3.22□□□□□ -1.89
NCKAP1-202ENST00000361354 SPRR2FQ96RM1 72 aa3.18□□□□□ -1.9
NCKAP1-202ENST00000361354 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
NCKAP1-202ENST00000361354 FLGP20930 4061 aaPredicted RBP3.15□□□□□ -1.9
NCKAP1-202ENST00000361354 SPRR2GQ9BYE4 73 aa3.12□□□□□ -1.91
NCKAP1-202ENST00000361354 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
NCKAP1-202ENST00000361354 KRTAP12-4P60329 112 aa3.09□□□□□ -1.92
NCKAP1-202ENST00000361354 FRAS1Q86XX4 4008 aa3.07□□□□□ -1.92
NCKAP1-202ENST00000361354 KRTAP4-5Q9BYR2 181 aa3.06□□□□□ -1.92
NCKAP1-202ENST00000361354 DNAH10Q8IVF4 4471 aa3.04□□□□□ -1.92
NCKAP1-202ENST00000361354 ANK3Q12955 4377 aaKnown RBP3.02□□□□□ -1.93
NCKAP1-202ENST00000361354 DNAH11Q96DT5 4516 aa3.02□□□□□ -1.93
NCKAP1-202ENST00000361354 MT3P25713 68 aa3.01□□□□□ -1.93
NCKAP1-202ENST00000361354 MT1HP80294 61 aa3.01□□□□□ -1.93
NCKAP1-202ENST00000361354 MT2AP02795 61 aa2.98□□□□□ -1.93
NCKAP1-202ENST00000361354 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
NCKAP1-202ENST00000361354 SPRR2EP22531 72 aa2.95□□□□□ -1.94
NCKAP1-202ENST00000361354 SPRR2BP35325 72 aa2.95□□□□□ -1.94
NCKAP1-202ENST00000361354 SPRR2AP35326 72 aa2.95□□□□□ -1.94
NCKAP1-202ENST00000361354 DNAH17Q9UFH2 4485 aa2.95□□□□□ -1.94
NCKAP1-202ENST00000361354 PRKDCP78527 4128 aaKnown RBP2.93□□□□□ -1.94
NCKAP1-202ENST00000361354 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
NCKAP1-202ENST00000361354 DNAH8Q96JB1 4490 aa2.91□□□□□ -1.94
NCKAP1-202ENST00000361354 LCE2BO14633 110 aa2.91□□□□□ -1.94
NCKAP1-202ENST00000361354 MT1FP04733 61 aa2.91□□□□□ -1.94
NCKAP1-202ENST00000361354 MT1GP13640 62 aa2.89□□□□□ -1.95
NCKAP1-202ENST00000361354 SPRR2DP22532 72 aa2.88□□□□□ -1.95
NCKAP1-202ENST00000361354 KRTAP4-1Q9BYQ7 146 aa2.87□□□□□ -1.95
NCKAP1-202ENST00000361354 DNAH5Q8TE73 4624 aa2.85□□□□□ -1.95
NCKAP1-202ENST00000361354 LRP1Q07954 4544 aaKnown RBP2.85□□□□□ -1.95
NCKAP1-202ENST00000361354 FAT2Q9NYQ8 4349 aa2.83□□□□□ -1.96
NCKAP1-202ENST00000361354 SPRR5A0A1B0GTR4 108 aa2.82□□□□□ -1.96
NCKAP1-202ENST00000361354 PKHD1P08F94 4074 aa2.81□□□□□ -1.96
NCKAP1-202ENST00000361354 VPS13DQ5THJ4 4388 aa2.81□□□□□ -1.96
NCKAP1-202ENST00000361354 KRTAP19-8Q3LI54 63 aa2.77□□□□□ -1.97
NCKAP1-202ENST00000361354 DYNC1H1Q14204 4646 aaKnown RBP2.77□□□□□ -1.97
NCKAP1-202ENST00000361354 PLECQ15149 4684 aaKnown RBP2.75□□□□□ -1.97
NCKAP1-202ENST00000361354 PRM1P04553 51 aa2.75□□□□□ -1.97
NCKAP1-202ENST00000361354 MT1XP80297 61 aa2.75□□□□□ -1.97
NCKAP1-202ENST00000361354 APOBP04114 4563 aaKnown RBP2.73□□□□□ -1.97
NCKAP1-202ENST00000361354 LCE2CQ5TA81 110 aa2.72□□□□□ -1.97
NCKAP1-202ENST00000361354 STARD9Q9P2P6 4700 aa2.72□□□□□ -1.97
NCKAP1-202ENST00000361354 DYNC2H1Q8NCM8 4307 aaKnown RBP2.71□□□□□ -1.98
NCKAP1-202ENST00000361354 DNAH9Q9NYC9 4486 aa2.71□□□□□ -1.98
NCKAP1-202ENST00000361354 PKHD1L1Q86WI1 4243 aa2.68□□□□□ -1.98
NCKAP1-202ENST00000361354 KRTAP19-1Q8IUB9 90 aa2.67□□□□□ -1.98
NCKAP1-202ENST00000361354 FAT1Q14517 4588 aa2.65□□□□□ -1.98
NCKAP1-202ENST00000361354 MT1LQ93083 61 aa2.64□□□□□ -1.99
NCKAP1-202ENST00000361354 LCE2DQ5TA82 110 aaPredicted RBP2.64□□□□□ -1.99
NCKAP1-202ENST00000361354 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
NCKAP1-202ENST00000361354 LRP1BQ9NZR2 4599 aa2.63□□□□□ -1.99
NCKAP1-202ENST00000361354 FAT3Q8TDW7 4589 aa2.62□□□□□ -1.99
NCKAP1-202ENST00000361354 HSPG2P98160 4391 aa2.61□□□□□ -1.99
NCKAP1-202ENST00000361354 SACSQ9NZJ4 4579 aa2.61□□□□□ -1.99
NCKAP1-202ENST00000361354 LCE1DQ5T752 114 aa2.59□□□□□ -2
NCKAP1-202ENST00000361354 PKD1P98161 4303 aa2.59□□□□□ -2
NCKAP1-202ENST00000361354 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
NCKAP1-202ENST00000361354 MYCBP2O75592 4640 aa2.57□□□□□ -2
NCKAP1-202ENST00000361354 KRTAP4-8A0A0G2JLE6 195 aa2.56□□□□□ -2
NCKAP1-202ENST00000361354 KRTAP4-8Q9BYQ9 185 aa2.56□□□□□ -2
NCKAP1-202ENST00000361354 MT1BP07438 61 aa2.55□□□□□ -2
NCKAP1-202ENST00000361354 MT4P47944 62 aa2.53□□□□□ -2
NCKAP1-202ENST00000361354 RYR1P21817 5038 aa2.53□□□□□ -2
NCKAP1-202ENST00000361354 MT1EP04732 61 aa2.51□□□□□ -2.01
NCKAP1-202ENST00000361354 TNXBP22105 4242 aa2.51□□□□□ -2.01
NCKAP1-202ENST00000361354 MT1MQ8N339 61 aa2.47□□□□□ -2.01
NCKAP1-202ENST00000361354 KRTAP9-8Q9BYQ0 159 aa2.46□□□□□ -2.02
NCKAP1-202ENST00000361354 KRTAP4-7Q9BYR0 210 aa2.46□□□□□ -2.02
NCKAP1-202ENST00000361354 RYR3Q15413 4870 aa2.43□□□□□ -2.02
NCKAP1-202ENST00000361354 MUC17Q685J3 4493 aa2.43□□□□□ -2.02
NCKAP1-202ENST00000361354 KRTAP9-3Q9BYQ3 159 aa2.43□□□□□ -2.02
NCKAP1-202ENST00000361354 LCE5AQ5TCM9 118 aa2.41□□□□□ -2.02
NCKAP1-202ENST00000361354 DNHD1Q96M86 4753 aa2.4□□□□□ -2.03
NCKAP1-202ENST00000361354 LOC100996750A0A140TA64 210 aa2.38□□□□□ -2.03
NCKAP1-202ENST00000361354 PCLOQ9Y6V0 5065 aa2.38□□□□□ -2.03
NCKAP1-202ENST00000361354 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
NCKAP1-202ENST00000361354 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
NCKAP1-202ENST00000361354 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
NCKAP1-202ENST00000361354 MT1AP04731 61 aa2.35□□□□□ -2.03
NCKAP1-202ENST00000361354 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
NCKAP1-202ENST00000361354 LCE1EQ5T753 118 aa2.32□□□□□ -2.04
NCKAP1-202ENST00000361354 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
NCKAP1-202ENST00000361354 LCE1AQ5T7P2 110 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms