RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 ACYP2P14621 99 aa8.29□□□□□ -1.08
LMNA-202ENST00000361308 TMEM258P61165 79 aa8.28□□□□□ -1.08
LMNA-202ENST00000361308 RPS28P62857 69 aaKnown RBP8.27□□□□□ -1.09
LMNA-202ENST00000361308 LCA10Q71F78 164 aa8.26□□□□□ -1.09
LMNA-202ENST00000361308 CSAG1Q6PB30 78 aa8.18□□□□□ -1.1
LMNA-202ENST00000361308 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
LMNA-202ENST00000361308 CHKB-CPT1BH3BT56 60 aa8.15□□□□□ -1.1
LMNA-202ENST00000361308 ATP5EP56381 51 aaPredicted RBP8.14□□□□□ -1.11
LMNA-202ENST00000361308 KRTAP10-6P60371 365 aaPredicted RBP8.12□□□□□ -1.11
LMNA-202ENST00000361308 COA5Q86WW8 74 aa8.1□□□□□ -1.11
LMNA-202ENST00000361308 LORP23490 312 aaPredicted RBP8.09□□□□□ -1.11
LMNA-202ENST00000361308 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
LMNA-202ENST00000361308 SERP1Q9Y6X1 66 aa8.02□□□□□ -1.13
LMNA-202ENST00000361308 KRTAP9-8Q9BYQ0 159 aa8.01□□□□□ -1.13
LMNA-202ENST00000361308 MT2AP02795 61 aa7.95□□□□□ -1.14
LMNA-202ENST00000361308 H0YAA0 97 aa7.93□□□□□ -1.14
LMNA-202ENST00000361308 KRTAP10-10P60014 251 aa7.92□□□□□ -1.14
LMNA-202ENST00000361308 MT1FP04733 61 aa7.9□□□□□ -1.14
LMNA-202ENST00000361308 ADM2Q7Z4H4 148 aa7.89□□□□□ -1.15
LMNA-202ENST00000361308 SMIM26A0A096LP01 95 aa7.89□□□□□ -1.15
LMNA-202ENST00000361308 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
LMNA-202ENST00000361308 SEC61GP60059 68 aa7.78□□□□□ -1.16
LMNA-202ENST00000361308 P0C880 135 aa7.78□□□□□ -1.16
LMNA-202ENST00000361308 KRTAP9-3Q9BYQ3 159 aa7.74□□□□□ -1.17
LMNA-202ENST00000361308 CRIPTQ9P021 101 aa7.74□□□□□ -1.17
LMNA-202ENST00000361308 A0A1B0GU69 56 aa7.71□□□□□ -1.18
LMNA-202ENST00000361308 LCE2DQ5TA82 110 aaPredicted RBP7.68□□□□□ -1.18
LMNA-202ENST00000361308 LINC01558Q9Y6Z2 57 aa7.68□□□□□ -1.18
LMNA-202ENST00000361308 PRO0628Q9UI54 55 aa7.66□□□□□ -1.18
LMNA-202ENST00000361308 R4GN34 69 aa7.66□□□□□ -1.18
LMNA-202ENST00000361308 PRR15LQ9BU68 103 aa7.64□□□□□ -1.19
LMNA-202ENST00000361308 KRTAP19-1Q8IUB9 90 aa7.63□□□□□ -1.19
LMNA-202ENST00000361308 SPRR2GQ9BYE4 73 aa7.63□□□□□ -1.19
LMNA-202ENST00000361308 M0QZ58 72 aa7.61□□□□□ -1.19
LMNA-202ENST00000361308 Q1T7F1 81 aa7.61□□□□□ -1.19
LMNA-202ENST00000361308 V9GYY9 64 aa7.61□□□□□ -1.19
LMNA-202ENST00000361308 A0A1B0GU33 70 aa7.58□□□□□ -1.2
LMNA-202ENST00000361308 LCE2BO14633 110 aa7.58□□□□□ -1.2
LMNA-202ENST00000361308 KRTAP9-2Q9BYQ4 174 aa7.58□□□□□ -1.2
LMNA-202ENST00000361308 BRK1Q8WUW1 75 aa7.5□□□□□ -1.21
LMNA-202ENST00000361308 LINC01554Q52M75 96 aa7.49□□□□□ -1.21
LMNA-202ENST00000361308 PSPHP1O15172 72 aa7.49□□□□□ -1.21
LMNA-202ENST00000361308 KRTAP13-4Q3LI77 160 aa7.49□□□□□ -1.21
LMNA-202ENST00000361308 KRTAP19-8Q3LI54 63 aa7.47□□□□□ -1.21
LMNA-202ENST00000361308 Q5VV11 94 aa7.47□□□□□ -1.21
LMNA-202ENST00000361308 SPATA8Q6RVD6 105 aa7.47□□□□□ -1.21
LMNA-202ENST00000361308 FSIP2Q5CZC0 6907 aa7.43□□□□□ -1.22
LMNA-202ENST00000361308 USH2AO75445 5202 aa7.41□□□□□ -1.22
LMNA-202ENST00000361308 UQCR11O14957 56 aa7.41□□□□□ -1.22
LMNA-202ENST00000361308 MT1BP07438 61 aa7.39□□□□□ -1.23
LMNA-202ENST00000361308 A0A0D9SG42 100 aa7.35□□□□□ -1.23
LMNA-202ENST00000361308 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
LMNA-202ENST00000361308 A6NN06 94 aa7.32□□□□□ -1.24
LMNA-202ENST00000361308 A8MU10 97 aa7.29□□□□□ -1.24
LMNA-202ENST00000361308 MIR22HGQ0VDD5 57 aa7.29□□□□□ -1.24
LMNA-202ENST00000361308 A6NED7 52 aa7.27□□□□□ -1.25
LMNA-202ENST00000361308 CRCT1Q9UGL9 99 aa7.26□□□□□ -1.25
LMNA-202ENST00000361308 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
LMNA-202ENST00000361308 SSPOA2VEC9 5147 aa7.22□□□□□ -1.25
LMNA-202ENST00000361308 KRTAP19-6Q3LI70 58 aa7.21□□□□□ -1.26
LMNA-202ENST00000361308 KRTAP12-1P59990 96 aa7.19□□□□□ -1.26
LMNA-202ENST00000361308 KRTAP12-2P59991 146 aa7.16□□□□□ -1.26
LMNA-202ENST00000361308 CDC42SE1Q9NRR8 79 aa7.16□□□□□ -1.26
LMNA-202ENST00000361308 PMAIP1Q13794 54 aa7.15□□□□□ -1.26
LMNA-202ENST00000361308 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
LMNA-202ENST00000361308 KRTAP9-6A0A140TA67 174 aa7.12□□□□□ -1.27
LMNA-202ENST00000361308 PRO2289Q9P1D8 64 aa7.11□□□□□ -1.27
LMNA-202ENST00000361308 KRTAP10-5P60370 271 aa7.1□□□□□ -1.27
LMNA-202ENST00000361308 MT1XP80297 61 aa7.08□□□□□ -1.28
LMNA-202ENST00000361308 K7ERS5 55 aa7.05□□□□□ -1.28
LMNA-202ENST00000361308 KTN1-AS1Q86SY8 53 aa7.01□□□□□ -1.29
LMNA-202ENST00000361308 FCGBPQ9Y6R7 5405 aaPredicted RBP7□□□□□ -1.29
LMNA-202ENST00000361308 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
LMNA-202ENST00000361308 KRTAP10-7P60409 375 aaPredicted RBP6.79□□□□□ -1.32
LMNA-202ENST00000361308 MACF1Q9UPN3 7388 aaKnown RBP6.74□□□□□ -1.33
LMNA-202ENST00000361308 TNP1P09430 55 aa6.73□□□□□ -1.33
LMNA-202ENST00000361308 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
LMNA-202ENST00000361308 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.72□□□□□ -1.33
LMNA-202ENST00000361308 ROMO1P60602 79 aa6.67□□□□□ -1.34
LMNA-202ENST00000361308 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
LMNA-202ENST00000361308 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
LMNA-202ENST00000361308 SYNE2Q8WXH0 6885 aaKnown RBP6.62□□□□□ -1.35
LMNA-202ENST00000361308 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
LMNA-202ENST00000361308 KMT2DO14686 5537 aa6.61□□□□□ -1.35
LMNA-202ENST00000361308 KRTAP8-1Q8IUC2 63 aa6.56□□□□□ -1.36
LMNA-202ENST00000361308 PRAC1Q96KF2 57 aa6.55□□□□□ -1.36
LMNA-202ENST00000361308 KRTAP9-7A8MTY7 169 aa6.47□□□□□ -1.37
LMNA-202ENST00000361308 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
LMNA-202ENST00000361308 LCE3AQ5TA76 89 aa6.47□□□□□ -1.37
LMNA-202ENST00000361308 KRTAP5-9P26371 169 aa6.41□□□□□ -1.38
LMNA-202ENST00000361308 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
LMNA-202ENST00000361308 SPRR2FQ96RM1 72 aa6.39□□□□□ -1.39
LMNA-202ENST00000361308 KRTAP19-5Q3LI72 72 aa6.33□□□□□ -1.4
LMNA-202ENST00000361308 KRTAP19-7Q3SYF9 63 aa6.32□□□□□ -1.4
LMNA-202ENST00000361308 PP632Q6XCG6 107 aa6.32□□□□□ -1.4
LMNA-202ENST00000361308 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
LMNA-202ENST00000361308 MUC12Q9UKN1 5478 aa6.23□□□□□ -1.41
LMNA-202ENST00000361308 MT1EP04732 61 aa6.23□□□□□ -1.41
LMNA-202ENST00000361308 SPRR2EP22531 72 aa6.15□□□□□ -1.42
LMNA-202ENST00000361308 SPRR2BP35325 72 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms