RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 NISCHQ9Y2I1 1504 aa39.74■■■■□ 3.95
LMNA-202ENST00000361308 CCDC180Q9P1Z9 1646 aa34.94■■■■□ 3.18
LMNA-202ENST00000361308 ABCC9O60706 1549 aa33.66■■■□□ 2.98
LMNA-202ENST00000361308 ZCCHC6Q5VYS8 1495 aaKnown RBP33.22■■■□□ 2.91
LMNA-202ENST00000361308 DCAF8L2P0C7V8 631 aa33.14■■■□□ 2.89
LMNA-202ENST00000361308 DCAF1Q9Y4B6 1507 aa32.87■■■□□ 2.85
LMNA-202ENST00000361308 MYO15BQ96JP2 1530 aa32.75■■■□□ 2.83
LMNA-202ENST00000361308 NACADO15069 1562 aa32.75■■■□□ 2.83
LMNA-202ENST00000361308 RB1CC1Q8TDY2 1594 aa32.62■■■□□ 2.81
LMNA-202ENST00000361308 SCRIBQ14160 1630 aa32.01■■■□□ 2.72
LMNA-202ENST00000361308 SHROOM4Q9ULL8 1493 aa31.93■■■□□ 2.7
LMNA-202ENST00000361308 UNC13AQ9UPW8 1703 aa31.82■■■□□ 2.68
LMNA-202ENST00000361308 PABPN1Q86U42 306 aaKnown RBP eCLIP31.65■■■□□ 2.66
LMNA-202ENST00000361308 BICRAQ9NZM4 1560 aa31.57■■■□□ 2.65
LMNA-202ENST00000361308 CECR2Q9BXF3 1484 aa30.91■■■□□ 2.54
LMNA-202ENST00000361308 BAZ1AQ9NRL2 1556 aaPredicted RBP30.75■■■□□ 2.51
LMNA-202ENST00000361308 EIF4G1Q04637 1599 aaKnown RBP30.72■■■□□ 2.51
LMNA-202ENST00000361308 SMARCA4P51532 1647 aa30.66■■■□□ 2.5
LMNA-202ENST00000361308 MROH2BQ7Z745 1585 aa30.65■■■□□ 2.5
LMNA-202ENST00000361308 RSF1Q96T23 1441 aaPredicted RBP30.57■■■□□ 2.48
LMNA-202ENST00000361308 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.47
LMNA-202ENST00000361308 CC2D2AQ9P2K1 1620 aa30.43■■■□□ 2.46
LMNA-202ENST00000361308 ATAD2BQ9ULI0 1458 aa30.36■■■□□ 2.45
LMNA-202ENST00000361308 WIZO95785 1651 aa30.34■■■□□ 2.45
LMNA-202ENST00000361308 SMARCA2P51531 1590 aa30.34■■■□□ 2.45
LMNA-202ENST00000361308 PEG3Q9GZU2 1588 aa30.33■■■□□ 2.45
LMNA-202ENST00000361308 DNAJC5BQ9UF47 199 aa30.31■■■□□ 2.44
LMNA-202ENST00000361308 NCAPD3P42695 1498 aa30.24■■■□□ 2.43
LMNA-202ENST00000361308 BAZ1BQ9UIG0 1483 aaKnown RBP30.16■■■□□ 2.42
LMNA-202ENST00000361308 HMGXB3Q12766 1538 aa30.1■■■□□ 2.41
LMNA-202ENST00000361308 TOP2AP11388 1531 aaKnown RBP30.04■■■□□ 2.4
LMNA-202ENST00000361308 CCDC88BA6NC98 1476 aa29.74■■■□□ 2.35
LMNA-202ENST00000361308 CADPSQ9ULU8 1353 aa29.44■■■□□ 2.3
LMNA-202ENST00000361308 CFTRP13569 1480 aa29.37■■■□□ 2.29
LMNA-202ENST00000361308 NESP48681 1621 aa29.32■■■□□ 2.28
LMNA-202ENST00000361308 LAMC3Q9Y6N6 1575 aa29.3■■■□□ 2.28
LMNA-202ENST00000361308 PDS5BQ9NTI5 1447 aa29.14■■■□□ 2.26
LMNA-202ENST00000361308 PRDM2Q13029 1718 aa29.08■■■□□ 2.25
LMNA-202ENST00000361308 FANCD2Q9BXW9 1451 aa29.07■■■□□ 2.24
LMNA-202ENST00000361308 ERCC6Q03468 1493 aa28.97■■■□□ 2.23
LMNA-202ENST00000361308 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
LMNA-202ENST00000361308 KIF21AQ7Z4S6 1674 aa28.91■■■□□ 2.22
LMNA-202ENST00000361308 ABCC8Q09428 1581 aa28.85■■■□□ 2.21
LMNA-202ENST00000361308 WRNQ14191 1432 aaPredicted RBP eCLIP28.82■■■□□ 2.25e-6■■■■□ 20.9
LMNA-202ENST00000361308 CHIC1Q5VXU3 224 aa28.78■■■□□ 2.2
LMNA-202ENST00000361308 MRC2Q9UBG0 1479 aa28.76■■■□□ 2.19
LMNA-202ENST00000361308 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
LMNA-202ENST00000361308 URB2Q14146 1524 aaKnown RBP28.71■■■□□ 2.19
LMNA-202ENST00000361308 CUX1P39880 1505 aa28.7■■■□□ 2.18
LMNA-202ENST00000361308 TOPBP1Q92547 1522 aa28.67■■■□□ 2.18
LMNA-202ENST00000361308 DNMBPQ6XZF7 1577 aa28.67■■■□□ 2.18
LMNA-202ENST00000361308 SYNJ1O43426 1573 aa28.65■■■□□ 2.18
LMNA-202ENST00000361308 THOC2Q8NI27 1593 aaKnown RBP28.63■■■□□ 2.17
LMNA-202ENST00000361308 TOP2BQ02880 1626 aa28.62■■■□□ 2.17
LMNA-202ENST00000361308 WDR62O43379 1518 aa28.61■■■□□ 2.17
LMNA-202ENST00000361308 BIVM-ERCC5R4GMW8 1640 aa28.57■■■□□ 2.16
LMNA-202ENST00000361308 FGD5Q6ZNL6 1462 aa28.51■■■□□ 2.16
LMNA-202ENST00000361308 POLA1P09884 1462 aaPredicted RBP28.48■■■□□ 2.15
LMNA-202ENST00000361308 SOGA1O94964 1423 aa28.42■■■□□ 2.14
LMNA-202ENST00000361308 CUX2O14529 1486 aa28.37■■■□□ 2.13
LMNA-202ENST00000361308 RAD54L2Q9Y4B4 1467 aa28.37■■■□□ 2.13
LMNA-202ENST00000361308 IFT140Q96RY7 1462 aa28.32■■■□□ 2.12
LMNA-202ENST00000361308 TARBP1Q13395 1621 aaKnown RBP28.26■■■□□ 2.11
LMNA-202ENST00000361308 ABCA10Q8WWZ4 1543 aa28.26■■■□□ 2.11
LMNA-202ENST00000361308 TDRD9Q8NDG6 1382 aaKnown RBP28.2■■■□□ 2.1
LMNA-202ENST00000361308 KIF27Q86VH2 1401 aa28.17■■■□□ 2.1
LMNA-202ENST00000361308 ZNF608Q9ULD9 1512 aaPredicted RBP28.15■■■□□ 2.1
LMNA-202ENST00000361308 WDR97A6NE52 1622 aa28.14■■■□□ 2.1
LMNA-202ENST00000361308 FAM9AQ8IZU1 332 aaPredicted RBP28.13■■■□□ 2.09
LMNA-202ENST00000361308 RUSC2Q8N2Y8 1516 aa28.12■■■□□ 2.09
LMNA-202ENST00000361308 AQRO60306 1485 aaKnown RBP eCLIP28.12■■■□□ 2.092e-7■■■■■ 36.3
LMNA-202ENST00000361308 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.09
LMNA-202ENST00000361308 EEA1Q15075 1411 aa28.07■■■□□ 2.08
LMNA-202ENST00000361308 ABCA5Q8WWZ7 1642 aa28.03■■■□□ 2.08
LMNA-202ENST00000361308 CSRNP3Q8WYN3 585 aa28.02■■■□□ 2.08
LMNA-202ENST00000361308 EIF4G3O43432 1585 aaKnown RBP28.01■■■□□ 2.07
LMNA-202ENST00000361308 IGF1RP08069 1367 aa27.98■■■□□ 2.07
LMNA-202ENST00000361308 GRIN2BQ13224 1484 aa27.97■■■□□ 2.07
LMNA-202ENST00000361308 ERICH3Q5RHP9 1530 aa27.93■■■□□ 2.06
LMNA-202ENST00000361308 PBRM1Q86U86 1689 aa27.88■■■□□ 2.05
LMNA-202ENST00000361308 CARMIL1Q5VZK9 1371 aa27.84■■■□□ 2.05
LMNA-202ENST00000361308 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
LMNA-202ENST00000361308 MAGI1Q96QZ7 1491 aaPredicted RBP27.81■■■□□ 2.04
LMNA-202ENST00000361308 CUL7Q14999 1698 aa27.78■■■□□ 2.04
LMNA-202ENST00000361308 FHAD1B1AJZ9 1412 aa27.78■■■□□ 2.04
LMNA-202ENST00000361308 PRXQ9BXM0 1461 aa27.77■■■□□ 2.04
LMNA-202ENST00000361308 FBLN2P98095 1184 aa27.74■■■□□ 2.03
LMNA-202ENST00000361308 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
LMNA-202ENST00000361308 EHMT2Q96KQ7 1210 aa27.74■■■□□ 2.03
LMNA-202ENST00000361308 RAPGEF2Q9Y4G8 1499 aa27.72■■■□□ 2.03
LMNA-202ENST00000361308 ADAMTS12P58397 1594 aa27.72■■■□□ 2.03
LMNA-202ENST00000361308 SYNJ2O15056 1496 aa27.7■■■□□ 2.03
LMNA-202ENST00000361308 KIF21BO75037 1637 aa27.67■■■□□ 2.02
LMNA-202ENST00000361308 LOC105371045A0A1W2PR82 267 aa27.65■■■□□ 2.02
LMNA-202ENST00000361308 GOLGA3Q08378 1498 aa27.63■■■□□ 2.01
LMNA-202ENST00000361308 UBTFP17480 764 aaKnown RBP27.61■■■□□ 2.01
LMNA-202ENST00000361308 GRIN2AQ12879 1464 aa27.6■■■□□ 2.01
LMNA-202ENST00000361308 CHD1O14646 1710 aa27.51■■□□□ 1.99
LMNA-202ENST00000361308 NUP160Q12769 1436 aa27.44■■□□□ 1.98
LMNA-202ENST00000361308 OSCARQ8IYS5 282 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms