RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 LOC101927531A0A1B0GV80 90 aa6.31□□□□□ -1.4
NIF3L1-201ENST00000359683 MP68P56378 58 aa6.3□□□□□ -1.4
NIF3L1-201ENST00000359683 CYP4F30PQ9H0H9 118 aa6.3□□□□□ -1.4
NIF3L1-201ENST00000359683 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
NIF3L1-201ENST00000359683 H3BPC8 53 aa6.28□□□□□ -1.4
NIF3L1-201ENST00000359683 C1orf64Q8NEQ6 169 aa6.28□□□□□ -1.4
NIF3L1-201ENST00000359683 LINC00208Q96KT6 92 aa6.28□□□□□ -1.4
NIF3L1-201ENST00000359683 RBM12B-AS1Q9P1G2 102 aa6.28□□□□□ -1.4
NIF3L1-201ENST00000359683 CCDC179H3BU77 68 aa6.25□□□□□ -1.41
NIF3L1-201ENST00000359683 SERP2Q8N6R1 65 aa6.25□□□□□ -1.41
NIF3L1-201ENST00000359683 COX6B2Q6YFQ2 88 aa6.24□□□□□ -1.41
NIF3L1-201ENST00000359683 C4orf26Q17RF5 130 aa6.21□□□□□ -1.41
NIF3L1-201ENST00000359683 FAM236DA0A1B0GTK5 79 aa6.21□□□□□ -1.42
NIF3L1-201ENST00000359683 FAM236CP0DP71 79 aa6.21□□□□□ -1.42
NIF3L1-201ENST00000359683 COX7CP15954 63 aa6.2□□□□□ -1.42
NIF3L1-201ENST00000359683 KLKP1Q107X0 134 aa6.19□□□□□ -1.42
NIF3L1-201ENST00000359683 FLGP20930 4061 aaPredicted RBP6.16□□□□□ -1.42
NIF3L1-201ENST00000359683 MT1HP80294 61 aa6.16□□□□□ -1.42
NIF3L1-201ENST00000359683 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
NIF3L1-201ENST00000359683 H1FX-AS1Q4G0G2 97 aa6.14□□□□□ -1.43
NIF3L1-201ENST00000359683 C20orf197Q8N268 126 aa6.14□□□□□ -1.43
NIF3L1-201ENST00000359683 SNURFQ9Y675 71 aa6.14□□□□□ -1.43
NIF3L1-201ENST00000359683 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
NIF3L1-201ENST00000359683 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
NIF3L1-201ENST00000359683 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
NIF3L1-201ENST00000359683 A8MUN3 132 aa6.07□□□□□ -1.44
NIF3L1-201ENST00000359683 M0R2T5 61 aa6.05□□□□□ -1.44
NIF3L1-201ENST00000359683 TMEM258P61165 79 aa6.04□□□□□ -1.44
NIF3L1-201ENST00000359683 KRTAP10-6P60371 365 aaPredicted RBP6.03□□□□□ -1.44
NIF3L1-201ENST00000359683 SEC61GP60059 68 aa6.03□□□□□ -1.44
NIF3L1-201ENST00000359683 DMAC1Q96GE9 116 aa6.03□□□□□ -1.44
NIF3L1-201ENST00000359683 NDUFC1O43677 76 aa6.02□□□□□ -1.45
NIF3L1-201ENST00000359683 SPANXA2-OT1Q8N9U9 137 aa6.02□□□□□ -1.45
NIF3L1-201ENST00000359683 CYSTM1Q9H1C7 97 aa6.01□□□□□ -1.45
NIF3L1-201ENST00000359683 S4R3F8 94 aa6□□□□□ -1.45
NIF3L1-201ENST00000359683 H7BZZ5 65 aa5.99□□□□□ -1.45
NIF3L1-201ENST00000359683 RPS28P62857 69 aaKnown RBP5.99□□□□□ -1.45
NIF3L1-201ENST00000359683 LCA10Q71F78 164 aa5.98□□□□□ -1.45
NIF3L1-201ENST00000359683 ACYP2P14621 99 aa5.96□□□□□ -1.46
NIF3L1-201ENST00000359683 CSAG1Q6PB30 78 aa5.92□□□□□ -1.46
NIF3L1-201ENST00000359683 ATP5EP56381 51 aaPredicted RBP5.88□□□□□ -1.47
NIF3L1-201ENST00000359683 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
NIF3L1-201ENST00000359683 MT2AP02795 61 aa5.85□□□□□ -1.47
NIF3L1-201ENST00000359683 CHKB-CPT1BH3BT56 60 aa5.81□□□□□ -1.48
NIF3L1-201ENST00000359683 COA5Q86WW8 74 aa5.81□□□□□ -1.48
NIF3L1-201ENST00000359683 MT1FP04733 61 aa5.8□□□□□ -1.48
NIF3L1-201ENST00000359683 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
NIF3L1-201ENST00000359683 SPTSSBQ8NFR3 76 aa5.79□□□□□ -1.48
NIF3L1-201ENST00000359683 KRTAP10-10P60014 251 aa5.77□□□□□ -1.48
NIF3L1-201ENST00000359683 H0YAA0 97 aa5.77□□□□□ -1.49
NIF3L1-201ENST00000359683 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
NIF3L1-201ENST00000359683 ADM2Q7Z4H4 148 aa5.7□□□□□ -1.5
NIF3L1-201ENST00000359683 USH2AO75445 5202 aa5.68□□□□□ -1.5
NIF3L1-201ENST00000359683 SSPOA2VEC9 5147 aa5.67□□□□□ -1.5
NIF3L1-201ENST00000359683 P0C880 135 aa5.63□□□□□ -1.51
NIF3L1-201ENST00000359683 CRIPTQ9P021 101 aa5.63□□□□□ -1.51
NIF3L1-201ENST00000359683 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
NIF3L1-201ENST00000359683 Q1T7F1 81 aa5.57□□□□□ -1.52
NIF3L1-201ENST00000359683 FCGBPQ9Y6R7 5405 aaPredicted RBP5.56□□□□□ -1.52
NIF3L1-201ENST00000359683 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
NIF3L1-201ENST00000359683 V9GYY9 64 aa5.54□□□□□ -1.52
NIF3L1-201ENST00000359683 R4GN34 69 aa5.52□□□□□ -1.53
NIF3L1-201ENST00000359683 LINC01558Q9Y6Z2 57 aa5.51□□□□□ -1.53
NIF3L1-201ENST00000359683 A0A1B0GU69 56 aa5.5□□□□□ -1.53
NIF3L1-201ENST00000359683 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
NIF3L1-201ENST00000359683 M0QZ58 72 aa5.49□□□□□ -1.53
NIF3L1-201ENST00000359683 PRO0628Q9UI54 55 aa5.46□□□□□ -1.54
NIF3L1-201ENST00000359683 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
NIF3L1-201ENST00000359683 A0A1B0GU33 70 aa5.44□□□□□ -1.54
NIF3L1-201ENST00000359683 MT1BP07438 61 aa5.44□□□□□ -1.54
NIF3L1-201ENST00000359683 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
NIF3L1-201ENST00000359683 PRR15LQ9BU68 103 aa5.44□□□□□ -1.54
NIF3L1-201ENST00000359683 Q5VV11 94 aa5.43□□□□□ -1.54
NIF3L1-201ENST00000359683 KRTAP13-4Q3LI77 160 aa5.42□□□□□ -1.54
NIF3L1-201ENST00000359683 PSPHP1O15172 72 aa5.41□□□□□ -1.54
NIF3L1-201ENST00000359683 BRK1Q8WUW1 75 aa5.41□□□□□ -1.54
NIF3L1-201ENST00000359683 SYNE2Q8WXH0 6885 aaKnown RBP5.39□□□□□ -1.55
NIF3L1-201ENST00000359683 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
NIF3L1-201ENST00000359683 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
NIF3L1-201ENST00000359683 SPATA8Q6RVD6 105 aa5.35□□□□□ -1.55
NIF3L1-201ENST00000359683 A6NN06 94 aa5.33□□□□□ -1.56
NIF3L1-201ENST00000359683 PLAC4Q8WY50 150 aa5.31□□□□□ -1.56
NIF3L1-201ENST00000359683 UQCR11O14957 56 aa5.28□□□□□ -1.56
NIF3L1-201ENST00000359683 KRTAP6-3Q3LI67 103 aa5.27□□□□□ -1.57
NIF3L1-201ENST00000359683 A0A0D9SG42 100 aa5.26□□□□□ -1.57
NIF3L1-201ENST00000359683 A6NED7 52 aa5.26□□□□□ -1.57
NIF3L1-201ENST00000359683 A8MU10 97 aa5.23□□□□□ -1.57
NIF3L1-201ENST00000359683 KRTAP10-5P60370 271 aa5.23□□□□□ -1.57
NIF3L1-201ENST00000359683 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
NIF3L1-201ENST00000359683 KRTAP12-1P59990 96 aa5.2□□□□□ -1.58
NIF3L1-201ENST00000359683 MIR22HGQ0VDD5 57 aa5.19□□□□□ -1.58
NIF3L1-201ENST00000359683 MT1XP80297 61 aa5.19□□□□□ -1.58
NIF3L1-201ENST00000359683 SPINT4Q6UDR6 99 aa5.18□□□□□ -1.58
NIF3L1-201ENST00000359683 KRTAP12-2P59991 146 aa5.17□□□□□ -1.58
NIF3L1-201ENST00000359683 PRO2289Q9P1D8 64 aa5.15□□□□□ -1.58
NIF3L1-201ENST00000359683 PMAIP1Q13794 54 aa5.13□□□□□ -1.59
NIF3L1-201ENST00000359683 CAMK2N1Q7Z7J9 78 aa5.12□□□□□ -1.59
NIF3L1-201ENST00000359683 NEBP20929 6669 aa5.11□□□□□ -1.59
NIF3L1-201ENST00000359683 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
NIF3L1-201ENST00000359683 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms